AMCG00010909


Basic Information

Item Value
gene id AMCG00010909
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 4015598 ~ 4020921 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00010909
AAGAGCTCTCCTTTCTCACGGTCTGATTGGCGGAAAGGAAACCAGGGTGGCGCGTTGCATCATGGGAGCCGTACTATTGGCTGGGCTCAAGCGGTTACATTTGAAATTTTTCCACAAGGAAGGGGATCACTGTGGGAGTGGAGACCTCGCTTTGTACAAATCCGCGCACAGCTGCTGCCAGGTGTCCTGTCATCATGGCTCCCAGAAAAAGGACCACCGCCAAGAGCCGCAAAAACAAACCCAAGATGGATAAGCTGGACGCCTTCCTCCACGACTTCGACAGCGAAGTTAAAACCATCATCGACAGACTGAAAGAGAAGACCAAGAGTCTCCTGAAAGATGCtgataatttatacaatctgGCCATCATCAAGCTTCCCAAGGCGGACCGGCAGCTCAACTGGATTGAATACTCGGCTCCAGAAGGAAAAACTAAAGCCATCGCAGAAGCTGCAAAGAGGGAACTGGAAAATGCAGATGTAGCCAATATCGTCTCTGAAGCACAAATTGTGCCACAAAAATCCACCAAAAAGGCAAGCAAAAGAAAAGGAGCTGTGTTGAGTTCTGCAGAGGAAGAGAATATTTCAAATAACCTGTCAACAACCAAAAAGGGTAGAGCAACTGCCAAGAAAGCCCCTTCGACGAGCAAGAAGGCCCGAGCGCTGTCTGTCAGCAAGCAGAACTCCTCCATTCGAAAGTCAACACGGAAAGCTCTGGTGACCCCAGCGAGGAGCGGACTGGACTCTTCTCTCATGGGCCCCACTCCCCTCATCACCCCGAGGTTCGATTCGAGATTGCCCAAGACGCCCGCCGTGAGGAACCCGAGACACAAGGAGAGGGTTTACAGCATCTCTGTGAACGGCAGCCCCATCGCTGGAGTGAGCAACGACATCCTCATCAACAGTATCCAGCTGCTTGCAAGTGAGATGGAGTCCGTGGACCTCAGTCAGCTGGACGAGCAGGCGGTGCAAAGCATACGGTTGCTCCAGAATCGTCTTGCGAATCTGTGTGGGAAGTGACGTCTTCAAGAGAAATAACCTAAACgttttatattgcttttgtaCAGAACAGTATCCACCCTTGACGGTgtcttgatatttttatttttttaacactttgttGTCTTGAACAATGTTGGAATGAACATGtcttcattttcaatgtttctCTCCTCCAAATCACCCTTTCTAtattgattaaatgtaaaactcaCCTTTCTTTTAACTGATCCTTGAGGAATGCTCATAGATGGTATCACAAGCAGCCGTCTGTGCTTTTAGTGATCGTTCTGCAAGGCCTTCAGTCTTATTGGCTTTggtttttatattgaaataatgctCAGTCCTCTccttttattcaattttaactAATTTTCTTCAATGTTGTTCTGTTTCAGATTTCCTCTGTGGGGTTTTCTCTCTTTCACAAATTGCTCATGTAAATATTCTGTAGTTCCGTAAATGCAACCCTTTTGTAAATATCTCGTCCATACCAGCGTGGTTGTAATGCTCCTTTTTTCGCTTTGTAACCTGTCTACGGTAGTTCATACTGTACCGtttgaaactaaaaaaaaaaataaaaaaaattctagGAGGCCTTTCGATGTGTTTCCAAATATAAAAAGATCTCTAAAAGCTTTTTAAGTGGTACAGCTGTTAAATGTGAGGGGCGCTGGGCTGAGATTGTTCAACCTTTGTCTCGTTCTAGCGCAATGTACATATCCTACATACTCAGAGACCTCAAATATCTACAATAAAGGCTTTACATCTGCTTTCGTTGTGTTGCTTTTTACCCCTTATATAGCTAAACAAAAATGGTGGCCAAATTACAGTGCATCGTATTGTTTTACCCTGTCCCCCATCAGTGTCTCTACTTTGTGAAACTAATGTCATGCTTGATTGAGAATCATGTCAGCCCTGTGATTTAGTGTGAAATTAATTCAGCCGTTTActgcatatacatttaatttgatatatttttaaaaatggcagagcaataaattacattcatCAGA

Function

GO: NA

KEGG:

id description
K11514 CDCA8; Borealin

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00010909 True 2014 mRNA 0.44 11 4015598 4020921

Neighbor

gene id symbol gene type direction distance location
AMCG00010904 NA coding downstream 404053 3592656 ~ 3611545 (-)
AMCG00010902 NA coding downstream 427503 3577231 ~ 3588095 (-)
AMCG00010899 NA coding downstream 491021 3514642 ~ 3524577 (-)
AMCG00010898 fam76b coding downstream 507603 3499002 ~ 3507995 (-)
AMCG00010900 NA coding downstream 519760 3485541 ~ 3495838 (-)
AMCG00010910 NA coding upstream 7881 4028802 ~ 4058729 (-)
AMCG00010914 dnali1,LOC107733506,LOC107587750 coding upstream 134110 4155031 ~ 4167037 (-)
AMCG00010917 pou3f1,LOC103364690 coding upstream 269135 4290056 ~ 4291183 (-)
AMCG00010919 rragc,rragca,LOC107700741,LOC107716860,LOC107704952,LOC106605136,LOC107730935 coding upstream 536632 4557553 ~ 4569654 (-)
AMCG00010921 NA coding upstream 553395 4574316 ~ 4575551 (-)
G103050 LOC103376870 non-coding downstream 230967 3784257 ~ 3784631 (-)
G103006 NA non-coding downstream 590829 3420888 ~ 3424769 (-)
G102920 NA non-coding downstream 745829 3268542 ~ 3269769 (-)
G102890 NA non-coding downstream 854086 3161097 ~ 3161512 (-)
G102889 NA non-coding downstream 854701 3160583 ~ 3160897 (-)
G103087 NA non-coding upstream 117699 4138620 ~ 4139637 (-)
G103094 NA non-coding upstream 129578 4150499 ~ 4150917 (-)
G103095 NA non-coding upstream 131597 4152518 ~ 4152748 (-)
G103149 NA non-coding upstream 404433 4425354 ~ 4425572 (-)
G103309 NA non-coding upstream 1310811 5331732 ~ 5334257 (-)
AMCG00010901 NA other downstream 440783 3553986 ~ 3574815 (-)
G102990 NA other downstream 596422 3320813 ~ 3419176 (-)
AMCG00010895 NA other downstream 688039 3321376 ~ 3327559 (-)
G102902 LOC104921322 other downstream 832979 3179970 ~ 3182619 (-)
G102774 NA other downstream 1254334 2758478 ~ 2761264 (-)
G103112 NA other upstream 148872 4169793 ~ 4185974 (-)
AMCG00010925 srsf10,LOC108426370,LOC101486875 other upstream 621731 4642652 ~ 4650406 (-)
AMCG00010937 NA other upstream 1094794 5115715 ~ 5129141 (-)
AMCG00010939 NA other upstream 1113132 5134053 ~ 5140509 (-)
AMCG00010946 NA other upstream 1263409 5284330 ~ 5325424 (-)

Expression


Co-expression Network