AMCG00010910


Basic Information

Item Value
gene id AMCG00010910
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 4028802 ~ 4058729 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00010910
GTGGGGTGCGGTGCCGTGCGGTGCCGTGCGGGGCGGGCGGTGCGGGGGCGGGGCCGGGCGCGCGGGGCTGTGCGGGGCTCGCTCGAGGACAGTCCGCAGCTCGGGACGCGGGACGCTCGCGGCAGCAGCGCAGGGTGTGCGTGGTCGGGTCTCCGCAGTGAGAGCAGCAGCATCCTGACACGCAGCAGCTGCTCCAGTAGTGCGCTGCGCAGACACAGTGCGTGTCCCTCTCGCAGCCCCAGCAGCGGCGTTGGCGCATCTGTCGCTGCGGCTCAGGAGACTGCAGGGGCTGGCACCGACCGATGCAGCGTCCCACGTAGCCGCGGCCTCGACGTCACGCTCAAATGGGTCTCCTCCAAACACCCGGGATCTTCATGGGTTGAATGTGGAAGAGCCGAGCGATTCACTCCCCAGTCCTCTCTGGCAGCGATTATGGCTTGTGTATTTGGACAAGATGAGTGGGCGCCGCCAGCAGTAAGCAGTCACCTGCAGAGTGGAAGCGATTGCACCCATCAGCCTGCCTGTGGACCTGACCGCTGGGCAGTTACTATGCAGTTTGGACTGGTTGTGGTGCTGGTTTTCTTAAGCTTAATGGATTATACCGGCAGCCTCAAGGTCTTAAAGGGAAGGAGGCAGAGACGCATAAGCACTGAAGTCCCCCCGTCATGCTCGAGGGGCTGTGAGTTGTGCTCTGAATACAACGGGTGTCTCAAATGCCTGCCCAAACTCTTCATCCTCCTGGAGAGAAATGACATCCGACAGATCGGAGTCTGCTTGGCATCGTGTCCCATGGGATACTTTGGGGTTCGAAACCCGGACATGAACAAGTGCACCAaatgTAAAATAGACAATTGTGAGGCGTGTTTCAGTAGAAATTTTTGCACAAAATGTAAGGAAGGCTTATATTTACACAGAGGGCGATGTTACTCCAGCTGCCCAGAAGGCTTCAGCACCGCTAACGGGACAGCGGAGTGCACCAGCACGGTGCAATGCGAGCTGGGCGAGTGGGGGCCCTGGGGTCCGTGTACCAAAAAGGGCAAACTCTGTGGCTTCAGGAAGGGCACACAGAACCGGACGAGAGAGTCCCTGCAGCCCCCCAGCCTGGACCCATCCTTGTGCCCcccagaaacagaaaacaagaagtGCACTGTACAGAAAAAGCCCTGTGGCAAAGGAGaaagggggaagaaaaaggaggaaCAAGGGAATAAAGACAATAAAGAGAACGGCAAAAACAAAGGCAAGGAAGGCAAAGCCGGCGCCCGGAAGAGAAAAACCCAGCACAGGGCCACGGCCGCTCCGCCGACCACCGCTGCTGCCGCCGCCACCAGCCTGAGCCTGTAAACTCACAGAGGCTGGATCTGATGCAATAGAGCCAATTGAAATCAAGAACGACCACGGACAGGAAAAAAGTCAGTGCTGCTATGCATTAAAACCCTCCCGCAGAACTGGAGTTTCGCTGCAATAAGACCAAACTGAAGAAGGATGAGAACAAATCACAGGAGAGAAATGTACAGCGTTAATAAGTCTGTCAGATACGCGTATCTCTCCTGTGTGACAGACTGAGCACGCAATGGAAGATCCTCTTCTCTTCACTTCCTATTTAGCCTTAATCGGGGGCGTCCCACGGGGTGCCTCCGGTCCTCGTTAACgagcattttaatttgtgttgtctGACGTTACGCACAGTGCTTCACCGCCGCCGCGGGGGACTGCACACTCTGCCGAGGAGCGCGATTTAAGTTAATGGGAAACAAAGTGGACAGTATTaagatgttttaatattatgatttaaGAAAAGAAAGGCACTGGaacttgtttttggtttgtttgccaaaaaaagaagaagaattttctttttttttttttcatcctattttaaaaagtattaagaGAATATATTAAAACGTATACTTCGTGGTCTGCCGTCCGATGGGAGCGGCCACCTCACTGCTTCAGTGTTTATTTCAAGCTAAGTCATGCTCTGCTCCAAATGTCTCTTAGCACAACGTAGGGGAGGAAGGACAGACCTATATAGATGTAAATATGTACAAATGTGTTCTGTGTTAGAGGCTATATCTTATATCTGATTCTGCGGAGGAAATGGTTTTGCTGTTTTGAGGGGCAGAGAGATGAAAACgttgtgaaaaactaaataatcaAAAGACGTCTGATGTCTAGTGTGTCTTAGTCGCAGGCAAAGGTCAGGTGGACATGTATGTGTACAGTAGGTAGGTTCAGATACATTGCACTTCACTTATCCTCTGTAGTCTACAAAACTGTGTGAGAAAACGTTAAACCCAGCAGTTCCTCTGTTATACGACAATATTCGCTCATAGTGGAACGGACCAAATCaattgtatgtacattttacacGGCTCCGTCAGCTCCTCACACGTTCCGGTTCATCTGGATTATCTGCTTGTCACCAAATATTTGCATAAGACAATATTatgtgcattgttttattttatatcatttttttgtttgtggacTGTGGACACTGAACTGCCACCTGGGCTCAGTTGAGAGAGAGATCTCGTGATTCTTGTACAAAGTGTAGTAACAGTAAAGAGGGTATcatatatactttaataaaaactcaaatacaataaaca

Function

GO:

id name namespace
GO:0090263 positive regulation of canonical Wnt signaling pathway biological_process
GO:0001525 angiogenesis biological_process
GO:0048010 vascular endothelial growth factor receptor signaling pathway biological_process
GO:0005794 Golgi apparatus cellular_component
GO:0005829 cytosol cellular_component
GO:0005576 extracellular region cellular_component
GO:0008201 heparin binding molecular_function

KEGG:

id description
K19471 RSPO1; R-spondin 1

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00010910 True 2618 mRNA 0.50 7 4028802 4058729

Neighbor

gene id symbol gene type direction distance location
AMCG00010909 NA coding downstream 7881 4015598 ~ 4020921 (-)
AMCG00010904 NA coding downstream 417257 3592656 ~ 3611545 (-)
AMCG00010902 NA coding downstream 440707 3577231 ~ 3588095 (-)
AMCG00010899 NA coding downstream 504225 3514642 ~ 3524577 (-)
AMCG00010898 fam76b coding downstream 520807 3499002 ~ 3507995 (-)
AMCG00010914 dnali1,LOC107733506,LOC107587750 coding upstream 96302 4155031 ~ 4167037 (-)
AMCG00010917 pou3f1,LOC103364690 coding upstream 231327 4290056 ~ 4291183 (-)
AMCG00010919 rragc,rragca,LOC107700741,LOC107716860,LOC107704952,LOC106605136,LOC107730935 coding upstream 498824 4557553 ~ 4569654 (-)
AMCG00010921 NA coding upstream 515587 4574316 ~ 4575551 (-)
AMCG00010920 rhbdl2 coding upstream 522122 4580851 ~ 4589405 (-)
G103050 LOC103376870 non-coding downstream 244171 3784257 ~ 3784631 (-)
G103006 NA non-coding downstream 604033 3420888 ~ 3424769 (-)
G102920 NA non-coding downstream 759033 3268542 ~ 3269769 (-)
G102890 NA non-coding downstream 867290 3161097 ~ 3161512 (-)
G102889 NA non-coding downstream 867905 3160583 ~ 3160897 (-)
G103087 NA non-coding upstream 79891 4138620 ~ 4139637 (-)
G103094 NA non-coding upstream 91770 4150499 ~ 4150917 (-)
G103095 NA non-coding upstream 93789 4152518 ~ 4152748 (-)
G103149 NA non-coding upstream 366625 4425354 ~ 4425572 (-)
G103309 NA non-coding upstream 1273003 5331732 ~ 5334257 (-)
AMCG00010901 NA other downstream 453987 3553986 ~ 3574815 (-)
G102990 NA other downstream 609626 3320813 ~ 3419176 (-)
AMCG00010895 NA other downstream 701243 3321376 ~ 3327559 (-)
G102902 LOC104921322 other downstream 846183 3179970 ~ 3182619 (-)
G102774 NA other downstream 1267538 2758478 ~ 2761264 (-)
G103112 NA other upstream 111064 4169793 ~ 4185974 (-)
AMCG00010925 srsf10,LOC108426370,LOC101486875 other upstream 583923 4642652 ~ 4650406 (-)
AMCG00010937 NA other upstream 1056986 5115715 ~ 5129141 (-)
AMCG00010939 NA other upstream 1075324 5134053 ~ 5140509 (-)
AMCG00010946 NA other upstream 1225601 5284330 ~ 5325424 (-)

Expression


Co-expression Network