AMCG00010918


Basic Information

Item Value
gene id AMCG00010918
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 4570100 ~ 4572543 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00010918
ATTGGAATGAAAGAcgcattcaaatttaaattgcaataCACTACTCACCACGGAGTGGCGCAACAGAGACAGTGTCAGTATTTGTTGGATCTGGGCTTGATTTCACTTACTGCACGTATGACTGAACTGAAATACCTCAGATGAACTGTATCAGGATGCATATGCGCGGTGCAAAAGTGAGATTATAATGAAATACGAGCTCGTCCAGtggtttcaaaatgaaataatacttTACAGAGATAATAAAACACGTGGGCCAACAGCAGTATGTAACCGACTACATGTGCGGCTGGCGTCAGTACAGATGTTTCAAACtttattaataaagaaagtgAACACAAACAGCGCAACAGTGGCCCGGGAGACGCTCTGTTGGTGGAGACGCGGGCGGCCGCGCTGCGCTCTGATTGGCCGAGCGGTGCGGAGATTCACGGCACGCATGCGCAGTGTGGGGCACGCACCTGGGGGACAGTTTGGAAACAGAAACTCTCAACATGGCGCACTACAGAGCATCGGAGTCCAAGCGGGAGCAGTTCAGGCGGTACCTGGAGAAAGCCGGGGTGCTGGACAGCCTGACCAATGTTTCGTTAAATGCCCCTGGAGAGCGGCGAGTTACCACCCTTAACTTCTGCGTTAGCTTCCTGAAGCAACATCTGGGGGTCTCTGGCCCAGAGGCGGCCGATGTGGAAGCGCTGCGCGTCGAGCTGGCCGAGCTGAGGCAGAAGTACGAGCTGGTGCTGGAGGAGAACAAGGAGCTGAAGGCCAAGCTTCTACAGTATGAGCCTCCCCAAGAAGATGGAAACGCTGAATAAAGGATTCCTGCAGGGATTTAGTACCTTTACCTTTACATTTAACCTCCTTATgtgtgaattatatatatataaacatatcatttaaaaattaaaagttgATTGGATGGCAGTTACTGAACAtagatataatttataaaaggctactttgtttttgtaaatagtaattcaaattaaactgcaCACGGATGTAACtactattttgttatttcaaatgttatgaTGAATGTACATGTGTCTCATTTACCtccaataaaaaacactgcactAACGCTCAGTTCATGTTTGTGATCGTACACGGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00010918 True 1111 mRNA 0.46 4 4570100 4572543

Neighbor

gene id symbol gene type direction distance location
AMCG00010916 NA coding upstream 320052 4239933 ~ 4250048 (+)
AMCG00010915 fhl3,LOC107587754,LOC107716861,LOC107704953 coding upstream 341172 4220702 ~ 4228928 (+)
AMCG00010912 meaf6,LOC106589015 coding upstream 394100 4171483 ~ 4176000 (+)
AMCG00010911 snip1,LOC107700737,LOC107755266,LOC107597115 coding upstream 399092 4167178 ~ 4171008 (+)
AMCG00010913 gnl2,LOC107700739,LOC104945619 coding upstream 419228 4138667 ~ 4150872 (+)
AMCG00010933 NA coding downstream 506665 5079208 ~ 5080356 (+)
AMCG00010941 NA coding downstream 579293 5151836 ~ 5156195 (+)
AMCG00010936 NA coding downstream 587467 5160010 ~ 5160444 (+)
AMCG00010935 NA coding downstream 594051 5166594 ~ 5169607 (+)
AMCG00010943 rps6ka1,LOC107654838,LOC107721568,LOC107711701,LOC107697698 coding downstream 682552 5255095 ~ 5274132 (+)
G103150 NA non-coding upstream 131964 4437877 ~ 4438136 (+)
G103137 pou3f1,LOC107700687,LOC107716828,LOC107755232,LOC107597138 non-coding upstream 279420 4288023 ~ 4290680 (+)
G103035 NA non-coding upstream 976693 3592668 ~ 3593407 (+)
G102959 NA non-coding upstream 1107597 3459862 ~ 3462503 (+)
G102945 NA non-coding upstream 1112443 3434919 ~ 3457657 (+)
G103258 NA non-coding downstream 561684 5134227 ~ 5140721 (+)
G103316 id3,LOC102304963,LOC106610662,LOC101474249,LOC100706678 non-coding downstream 781226 5353769 ~ 5355664 (+)
G103333 NA non-coding downstream 883815 5456358 ~ 5460573 (+)
G103348 NA non-coding downstream 977515 5550058 ~ 5613434 (+)
G103354 qki,LOC106922399,LOC103458862,LOC103144233,LOC107094928,LOC101469882,LOC107721620,LOC106947196,LOC107590898,LOC107697705 non-coding downstream 1044515 5617058 ~ 5652821 (+)
G103078 NA other upstream 486514 4049938 ~ 4083586 (+)
G103030 NA other upstream 989823 3577235 ~ 3580277 (+)
G102947 NA other upstream 1126566 3436618 ~ 3443534 (+)
AMCG00010888 NA other upstream 1141671 3421082 ~ 3428429 (+)
AMCG00010886 NA other upstream 1231684 3331719 ~ 3338416 (+)
AMCG00010922 NA other downstream 61929 4634472 ~ 4642403 (+)
AMCG00010979 NA other downstream 1814493 6387036 ~ 6395484 (+)
G103542 NA other downstream 2069440 6641983 ~ 6642628 (+)
AMCG00010990 pum1 other downstream 2319854 6892397 ~ 6920931 (+)
AMCG00010994 NA other downstream 2498890 7071433 ~ 7103508 (+)

Expression


Co-expression Network