Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00010921 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030133.1 |
| NCBI id | CM030133.1 |
| chromosome length | 32682731 |
| location | 4574316 ~ 4575551 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0044425 | obsolete membrane part | cellular_component |
| GO:0005886 | plasma membrane | cellular_component |
| GO:0005921 | gap junction | cellular_component |
| id | description |
|---|---|
| K07618 | GJA9; gap junction alpha-9 protein |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00010921 | True | 1236 | mRNA | 0.64 | 1 | 4574316 | 4575551 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00010919 | rragc,rragca,LOC107700741,LOC107716860,LOC107704952,LOC106605136,LOC107730935 | coding | downstream | 4662 | 4557553 ~ 4569654 (-) |
| AMCG00010917 | pou3f1,LOC103364690 | coding | downstream | 283133 | 4290056 ~ 4291183 (-) |
| AMCG00010914 | dnali1,LOC107733506,LOC107587750 | coding | downstream | 407279 | 4155031 ~ 4167037 (-) |
| AMCG00010910 | NA | coding | downstream | 515587 | 4028802 ~ 4058729 (-) |
| AMCG00010909 | NA | coding | downstream | 553395 | 4015598 ~ 4020921 (-) |
| AMCG00010920 | rhbdl2 | coding | upstream | 5300 | 4580851 ~ 4589405 (-) |
| AMCG00010924 | akirin1,LOC107700743,LOC107730931,LOC107704951 | coding | upstream | 17351 | 4592902 ~ 4604694 (-) |
| AMCG00010923 | NA | coding | upstream | 41880 | 4617431 ~ 4618522 (-) |
| AMCG00010926 | NA | coding | upstream | 77898 | 4653449 ~ 4658316 (-) |
| AMCG00010928 | NA | coding | upstream | 86077 | 4661628 ~ 4691552 (-) |
| G103149 | NA | non-coding | downstream | 148744 | 4425354 ~ 4425572 (-) |
| G103095 | NA | non-coding | downstream | 421568 | 4152518 ~ 4152748 (-) |
| G103094 | NA | non-coding | downstream | 423399 | 4150499 ~ 4150917 (-) |
| G103087 | NA | non-coding | downstream | 434679 | 4138620 ~ 4139637 (-) |
| G103050 | LOC103376870 | non-coding | downstream | 789685 | 3784257 ~ 3784631 (-) |
| G103309 | NA | non-coding | upstream | 756181 | 5331732 ~ 5334257 (-) |
| G103329 | NA | non-coding | upstream | 784424 | 5359975 ~ 5378226 (-) |
| G103362 | NA | non-coding | upstream | 983126 | 5558677 ~ 5615853 (-) |
| G103473 | NA | non-coding | upstream | 1808930 | 6384481 ~ 6386604 (-) |
| G103503 | NA | non-coding | upstream | 1938312 | 6513863 ~ 6514123 (-) |
| G103112 | NA | other | downstream | 388342 | 4169793 ~ 4185974 (-) |
| AMCG00010901 | NA | other | downstream | 999501 | 3553986 ~ 3574815 (-) |
| G102990 | NA | other | downstream | 1155140 | 3320813 ~ 3419176 (-) |
| AMCG00010895 | NA | other | downstream | 1246757 | 3321376 ~ 3327559 (-) |
| G102902 | LOC104921322 | other | downstream | 1391697 | 3179970 ~ 3182619 (-) |
| AMCG00010925 | srsf10,LOC108426370,LOC101486875 | other | upstream | 67101 | 4642652 ~ 4650406 (-) |
| AMCG00010937 | NA | other | upstream | 540164 | 5115715 ~ 5129141 (-) |
| AMCG00010939 | NA | other | upstream | 558502 | 5134053 ~ 5140509 (-) |
| AMCG00010946 | NA | other | upstream | 708779 | 5284330 ~ 5325424 (-) |
| G103395 | NA | other | upstream | 1129219 | 5704770 ~ 5748564 (-) |
