AMCG00010927


Basic Information

Item Value
gene id AMCG00010927
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 4723680 ~ 4736732 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00010927
AAACAGGAACTTGCCATTAAACGGTAAGTGTGCCAAAGTTCAGCCACAATAGCTGCCACAATGCATTCAGTACGGCCAAGACATGTCCCAGGTGTGCAGGGCTGAGCTGCGCAAATGAAATCTTTTACAGGGAAAGTCAGGAGGGAACGCTCGGAGCGATACAATCGTAATTCTTCTGACAGGAatacatctttttcttttttgtattattgtgtttgattgttttctgtggCTTGAGGGCTTTCCACTGCAGTGCCAGTCTTTTCCCAGTCTCCTCCGTGGGCCCTCTGGACCGTACCTGGCTCGTGGCTATGTGGCGTTTAAAGGGGGTTGCTCTGGTTCTGTGTTTGCTTGGTCTTCCTTCAACTGAGGGCTCCCCTGGGAAACTCGTGTACTTCAAATCCAAAAACCTCAGGAGCGTTCTTCACTGGGACAGAGCGGACGGCGCAGGGAAAGTCTTATACAGTGTGCAGTACAATGTATATGGATCTCCTATGCATGACCATACAGAATGCCAGAACATCACCGTCTTGTTTTGTGACCTCACGAAGGAAATGAATGACAACGAATACTACTATGCCAAAGTGACTGCTGGGGGAAAGGAGCTGAATACGTCCTCGAGGTTCAATCCGTTCCTAGAGACTGTCCTGGGAGCACCGGCGCTGCAAGTGTCTGCCACGGTCAACTCAATAAATATCACCGTGATTACCCCAACTGGCCCAGACAATAAGACCTCCCTGGAAGACATTTACGGAAACCTTAAATATGAAGTCAAAATCAACGACACCAAAGTGCCAAGACTGAAGGACAACTTTAAATCGATTGAGATTGTTTCACTCAAGCCTGACATGAAGTACTGCGGATCAGTGGTGTACATGCGGGAAAGCTACCAACACACAAGCGACCCTTCCGCATTCTGCATCAAGACCCAGAAAGCCCACCTGGGTAAATGTCGAGGCGAGATCAGGAGTGGAGGCAAGAGAAAGGACCTGTGGGCTAATTCAGAGCAGGAGAACATCCGTTCAGCAGCACCAATCAGCTCCCAGAAATCCCCCCAGGAGTGCGTCTGTGTCCACAAACTGGAAGTCCATCAAACCAAGCCCTGTCTCTTCACCATCTCCAATGTGGAAATGAAACCTCATGCCCGCTCCGGTTCCACCCTGCCCGACTCATCGACACCGTACACTTGTCAGGCCCACCCGGCGTCAACAGCCCCCGACAGCACCTGCACCTCCAGCACCGTTTACGGCCTGGTGTTGGACTTGCCGACAAACGCTGACACCGAGGAGAGAGGCTACCGGCTGGACGTGCTGCGGTGCATCGATCCTCCTGGGGGGCCAGAGCAGAAACGCTGCAACGACACAGACGAGGAGACGAGGGCCGACGTGGTGGGACAGCCGTTTACCTACGACCCCCGGCACGAGCCTCCACCTCCCGCTGACGGCTGCGCGGTTCAGCTCAGCCTCCAGATGATTCAGATAGACAGCCAACTGGAAATCCACAGCCTACTTCCTTTCCTTCAGCCCCAGCCAGACAGCCCGGACTGTGGGGAGGAAACACCTCTGCTGTTGGACATCACAATTGAGGGCGAGGCGAAGTCAGACACTGGAGAGCAGCCCAGGACAAAATACCTGCCCAGCCAGTTCCCTTGTCCCCCCGTTTATTTCCAGAGACCATCTGGTTACCGACCTTGTTTCCAAATTCCAAGCACAGGGTCACCGACGCAGGACGTTGTGTTTGTTCCCAGCGGGAGTTACAGGCCCAACCAGCTTTTCACCTCACTGGAAAGACTGCAAGCAGATAACTCTGGCTTCCTGAAGGACTGGGGCCTACAAATTCCAGAAATCATTGAATGATTCTAGTTCTGCTTTGGCGTTCCAGCCTAAGCCTTTTTTACACGTATGCTGAAGTTGCAACATAGAGAGAGTATGCCAAACCTCTGTAATTCCCTGGCTGCATTTCCAAATAGGGCTTATGAGAGCTGTGAAAaatgcaacagcagcagcacactgCCATGGCACAACGTGGGCAGTCCTGAGAGAGAACGAAAAGGCGGGGataaaacaccaagcacaaaaggTGCCGTGTCGTGCAGGACTCGGTGTGCAGAGAGCTGGTATTTACACCACGATGTTAATGACACTGTCTGTGGAGGATGGTCATTGTAAAAATGGCAGAACACTGTGCGTGCCAATATGAAGTAAAAATGATGTTTGTgatacaacacatttttgtacatAAGCTTGAATTGTTTTGTGATTGCCGTGCGCTGGCTGCACTGTTCAATAAGAAGTGATATTGTATGCTGTAAGTGAGAGAGAGTGGCTGTTTACAtacctgtcagtgtgtgtgccaagatgaaggaacataaaatataaactcaAGAAGTGCTGAAGTCTATACACACCATGaatgtataatattaaatgcagagaaatatatatagtgacaaGAGTATGATATATGtaccaaaaaaacaattgaCACTATTAAAAAAGTGACTTATATCTGCAATCTCGCACTAGTTCATTCACGTTGGAGCAACTATTGTATCAAAGACTCAAAATGCATCACCAGGAAGTGCTCCAGAAAAGTATTAGATGGGACTTCCCCTGGCCAACAGACGATACTTCCATAGTTTAAATAGAAATTTGATCTACCTCAGCTACCACAGACGGCTGGCTCCATTGTAAGCTAATACAGGGATCTGGATAGTTTATATCATGTTAcctttatttgaaatacatttgtttatacagAGCAGCGAAACTAAGATAGTATGTCACATCACATGGATCTTACATAACCCTACATAAAATCACAATTAccttttaaaaagtacagaatTGCGATTCAGTCATGCTAAACTGCTGTATCTTGAACTGTACTGACTTTCTCTTTATTACACATTGAATGTAATACtgtattctatatttttatatactatGTTAGTATTTCTGTCTGTAGTACCTTGCTGAATGTGAATGTTCTTGGACAAAGGCAAATACATGCataatcattgtttttataatagttGAATTGGAGAAACCCTTCAGAAACTCGACTGTGCTGGAAGCATGAGTAAGCAGGTGCCACCCTTCAGAGATTTATCTTGGAAAGTGGTTTATAGCTGAGGAACAAGAGGGTGGGGATTATGGCGCAGATAAAAGTGGCAAAGTACACGCACCTGAGAAATAGCAGGTTGCTAAGTGAACACCGAGCTTCCGTTCTGTGCTGTGGCTCTTGAGTTTGGTCTTTATTTAGGTTTGTTTTAGTGATTGTAAAAAGGTCTTGGGCTCACAGTGAGAAGCCTAGACTTCAGATCAAGGACAGGAGTGACTGGAGAGACATCCCGGTATAAATGCCCTGAAACTGAACATGTGGTTTCCTGTAAAAGAAAGCCTAAATCAGATAACTTTAATTAAACCCAATCAGTTTCTTTATCGTCCGTGGGCTGCTCGAGTGACAGTGTACAGCACCCTATAGGCAGCTGTCAGACAAGTGCCGTTCACAGATTCCACGGTAAGGACATAGTCCTGCCCTCTTTGGGTAAGATCCTCTTTCTCAGATTGTTTTAATACCCAGCAGTTCAGTAAAGACGCTTCTTCGCTGGGTCCCACATTAGGAGCTCATTTGAAAGTTAAGTGGTTGTCCCTTTGTTCAGTGGTTCAGACCACATTTGCAGCTtgtattctgtttctttattatgaATTTTTAAAGAATTGTCCTAATTCCAAGTGGGATGCGTTCCAAAACTTCTAATGCTCTTAAGTATTTCTGACTGTGAAGGAACAAATAGAGATATCAACCCCCATGAATCAACCCTTCTAATCCcttgcccctaagtggtggaacgaccttcccattgaagtcaaaacagcagagtccctgacctccttctggcgattactcaagacacatcttttcagactctactcgtattgtttattttgatttcccctatgctcccttcccttggcccttgactgtgacctaacaccttgtctgcactcatcagcttttacaatctaggatgtaagacctcatatattgtttactgtgtaTCTCATACCcacttgtgtaaattgcatctgctaagaaataaataataatcatgaat

Function

GO: NA

KEGG:

id description
ko04614 Renin-angiotensin system
ko04974 Protein digestion and absorption

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00010927 True 4120 mRNA 0.46 7 4723680 4736732

Neighbor

gene id symbol gene type direction distance location
AMCG00010929 NA coding downstream 21230 4696019 ~ 4702450 (-)
AMCG00010928 NA coding downstream 32128 4661628 ~ 4691552 (-)
AMCG00010926 NA coding downstream 65364 4653449 ~ 4658316 (-)
AMCG00010923 NA coding downstream 105158 4617431 ~ 4618522 (-)
AMCG00010924 akirin1,LOC107700743,LOC107730931,LOC107704951 coding downstream 118986 4592902 ~ 4604694 (-)
AMCG00010930 man1c1,LOC101464129,LOC100705345,LOC105006133 coding upstream 80001 4816733 ~ 4839059 (-)
AMCG00010932 NA coding upstream 158187 4894919 ~ 4897557 (-)
AMCG00010931 NA coding upstream 242204 4978936 ~ 4981453 (-)
AMCG00010934 LOC106605147,LOC101067841 coding upstream 266154 5002886 ~ 5030530 (-)
AMCG00010940 NA coding upstream 359859 5096591 ~ 5103397 (-)
G103149 NA non-coding downstream 298108 4425354 ~ 4425572 (-)
G103095 NA non-coding downstream 570932 4152518 ~ 4152748 (-)
G103094 NA non-coding downstream 572763 4150499 ~ 4150917 (-)
G103087 NA non-coding downstream 584043 4138620 ~ 4139637 (-)
G103050 LOC103376870 non-coding downstream 939049 3784257 ~ 3784631 (-)
G103309 NA non-coding upstream 595000 5331732 ~ 5334257 (-)
G103329 NA non-coding upstream 623243 5359975 ~ 5378226 (-)
G103362 NA non-coding upstream 821945 5558677 ~ 5615853 (-)
G103473 NA non-coding upstream 1647749 6384481 ~ 6386604 (-)
G103503 NA non-coding upstream 1777131 6513863 ~ 6514123 (-)
AMCG00010925 srsf10,LOC108426370,LOC101486875 other downstream 73274 4642652 ~ 4650406 (-)
G103112 NA other downstream 537706 4169793 ~ 4185974 (-)
AMCG00010901 NA other downstream 1148865 3553986 ~ 3574815 (-)
G102990 NA other downstream 1304504 3320813 ~ 3419176 (-)
AMCG00010937 NA other upstream 378983 5115715 ~ 5129141 (-)
AMCG00010939 NA other upstream 397321 5134053 ~ 5140509 (-)
AMCG00010946 NA other upstream 547598 5284330 ~ 5325424 (-)
G103395 NA other upstream 968038 5704770 ~ 5748564 (-)
AMCG00010966 NA other upstream 1228401 5965133 ~ 5974307 (-)

Expression


Co-expression Network