AMCG00010935


Basic Information

Item Value
gene id AMCG00010935
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 5166594 ~ 5169607 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00010935
ATGGGGACCCACACAAGGATAGTCGCCCTCTTTCTGGCTCCGATTGGCTGGGCTCTGCTGCTGGCTGCCACGGTCACCCCTAGTTGGAGAGAGTTCGCCCAGCGGCCTGGCTATTCTGCAGCCCTGTTTTTCTCCGATGGCCTTTGGGAAGCCTGTGTGGAAGACACTACACTCCACTCTCAGGAGTGTACATCCCCACCGGAGCTGATGTCATTGTCCTGGTGGCCCGTGCTGCAGCGTACGCTCACGCTGCTCTCTGTGACCCTGGGGGGACTCAGCTACATCACGGCACACCTGGGCGTTCACTGGTGGGACGCCCACACCAGCCCCGGCCTCACCATCACTTCGGGTGTCGGCATTGCCCTGGCAGGAGTGATCTACATCTGCGTGGTGTCCTACAAGGCCTTCGAGATCCTGCTGACGTTGTCCAACCCCAGTGTGGACGAAGGGGACAAATTCAGGCTGGGGACGGCTCTCTACCTAGGCTGGGCTGGAGGGACCATTGAAGTCTTGTCTGGGATGATGTTCATGTGGAGTTTTGGCTGCTGCTTTGTTCCCAATCCTTCCTCAGTCGCGAGGATGCAGACTCCGGCGGCGATGGTGGCAGGGATCGTGTGTGCCCCGCTAGGCCTGATCCTGGTCTTCACGGCCGTCATCACCCCCCACTGGCGGGAGTGCCAGGTGCGGGCGGGCCGGGCCTGGGCGCTGAGAACAGACGGGCTGTGGGAGTCCTGCCTGCAGGTGGCGGAGTCCGACTTCAAGGTCTGCTGGCCCGTGTCGGGGGCCTACTACCGGGATGCGCACGTGCGCTGGGCGCGGGGGCTGCTGCTGAGCTCGCTGTTCCTGTGTGGCACGGGCATCGTGCTGGCCAGCGTGGGTGTGCGCTGCTGGATGGACTTCCCCCAACGCAACGTGGCGGGCACCAGTGGCCTGGTGGTCCTTGTCTCGGGCCTGCTCTGCCTGGCCACCCTGGGGCTCTACGTGAGCAACATCCAGGCTCTGGGCTCCAACCCCAAACTCGTCTGGCACCGCGGGGGCAGCTCCCTCTATTTCGGCTGGGTGGGCGGGGGCATCCAGATCCTGGGCGGGGCAGTTCTCTCGCTCAGCTTCAAGCGGCCCAAATGTCCTATGTGCCCCACCAAGGCCCCCAGCGGAGACAAGGACTCCTATGACATCAGCTGCTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00010935 True 1185 mRNA 0.64 2 5166594 5169607

Neighbor

gene id symbol gene type direction distance location
AMCG00010936 NA coding upstream 6150 5160010 ~ 5160444 (+)
AMCG00010941 NA coding upstream 10399 5151836 ~ 5156195 (+)
AMCG00010933 NA coding upstream 86238 5079208 ~ 5080356 (+)
AMCG00010918 NA coding upstream 594051 4570100 ~ 4572543 (+)
AMCG00010916 NA coding upstream 916546 4239933 ~ 4250048 (+)
AMCG00010943 rps6ka1,LOC107654838,LOC107721568,LOC107711701,LOC107697698 coding downstream 85488 5255095 ~ 5274132 (+)
AMCG00010942 NA coding downstream 114209 5283816 ~ 5284298 (+)
AMCG00010951 NA coding downstream 334770 5504377 ~ 5511682 (+)
AMCG00010956 NA coding downstream 424326 5593933 ~ 5599868 (+)
AMCG00010957 NA coding downstream 430312 5599919 ~ 5601213 (+)
G103258 NA non-coding upstream 25873 5134227 ~ 5140721 (+)
G103152 NA non-coding upstream 546938 4536337 ~ 4619656 (+)
G103150 NA non-coding upstream 728458 4437877 ~ 4438136 (+)
G103137 pou3f1,LOC107700687,LOC107716828,LOC107755232,LOC107597138 non-coding upstream 875914 4288023 ~ 4290680 (+)
G103035 NA non-coding upstream 1573187 3592668 ~ 3593407 (+)
G103316 id3,LOC102304963,LOC106610662,LOC101474249,LOC100706678 non-coding downstream 184162 5353769 ~ 5355664 (+)
G103333 NA non-coding downstream 286751 5456358 ~ 5460573 (+)
G103348 NA non-coding downstream 380451 5550058 ~ 5613434 (+)
G103354 qki,LOC106922399,LOC103458862,LOC103144233,LOC107094928,LOC101469882,LOC107721620,LOC106947196,LOC107590898,LOC107697705 non-coding downstream 447451 5617058 ~ 5652821 (+)
G103360 LOC101158568,LOC103376478,LOC107695181,LOC102780806 non-coding downstream 499518 5669125 ~ 5694122 (+)
AMCG00010922 NA other upstream 524191 4634472 ~ 4642403 (+)
G103078 NA other upstream 1083008 4049938 ~ 4083586 (+)
G103030 NA other upstream 1586317 3577235 ~ 3580277 (+)
G102947 NA other upstream 1723060 3436618 ~ 3443534 (+)
AMCG00010888 NA other upstream 1738165 3421082 ~ 3428429 (+)
AMCG00010979 NA other downstream 1217429 6387036 ~ 6395484 (+)
G103542 NA other downstream 1472376 6641983 ~ 6642628 (+)
AMCG00010990 pum1 other downstream 1722790 6892397 ~ 6920931 (+)
AMCG00010994 NA other downstream 1901826 7071433 ~ 7103508 (+)
G103939 yars,LOC107724337,LOC107687080,LOC107709269 other downstream 3378756 8548363 ~ 8552605 (+)

Expression


Co-expression Network