AMCG00010941


Basic Information

Item Value
gene id AMCG00010941
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 5151836 ~ 5156195 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00010941
ATGTTGAAGATTGGGCACCTTGTTCTTCTCCTCTTCATGCCTGTTGTCTGTGCCAATAAAGCAGGGACGTTCACCGCTTGTTCGCAATGCTCTGAAAACACTGTGTGCGCTTCCCTCAACGAATCCGTGCGTCTCTCCGACTCCAACTCTTATGCTCAGTCTGTAACGTGCAACTGCATCAAGGGCTTCGTGGGCGATGGGGTCAACTGCTACAACGCCACAGAGTGTGAGAGCAACCAGGACTGCTGTGCCCCCGGCTTCCGGTGGTCCAGTCACGATGGCTGTGTCGATATAGACGAATGCTCAGTCCCCAGAAAGGACTGTCAGTCGCCTTTAATTTGTGAAAACACCATGGGTTCCTTTCACTGCCTGTCGGAGAGCGAGTCCCATCCCAGTGCCCGCTCTGTGAGGTTCAGTTGCGCAAAGCAGCTGTGTCGGGCAGGAGAGGACTGCCTGGAGGGGGCTGGCGAATCACGCTGTTCAGATCCCTGTCAGAACTACATCATCCTCAATGCCGATTCAGTAGTGTGCGGAAGTTGTGgaaaatatgaaacatgtataaaaaatgGCAGCGGTCTGTGGAACTGTGAATGCACGAGACACTTGCAGCCCAACGATGAAATACCAAATCCCACCCCAGAGCTTCTGTGCGGGCATAAACAGATGCAGATCGGTCTCGACAGATGCCACCTAGAGTCCAAGGGCCTGAACATCTCATCTGCGCAATTGGAGGGCAACAGCTGCCAGGGATATGAAGAACGCAACAAGTTGGTGTGGTTCAAGATGGGGAGGAAGGAAGGAGACTGCGGAACAAGGCTAATGACAAATGGCACCCACGCAATCTACAACAACACCTTGATCATCCATGGAAACAAGGTGGGAAGTGTGTATTTGGTTCCAGCTGCCAGTTTCCCCTTCTCCTGTGCTTACCCTTTGGATCTGAAGACCAGCCTTGAAGTAGCCATCCAGCCGGTCCAAACTACACTGGAGTTGAGGGTGTCTGGGGTGGGCTCCACTACAACCACAATGTCACTGTACCAGGACTCCAACTACACTGAGCCCTTCACCGCAGGGAGCGTCAGCCTGCCGTTGACATCCACGCTGTTTGTGGGCGTCTTTGTGGAGGATATAGAGGAAGCCCAATTCTCTGTGATCCTGGAGGACTGTTACGCAACCCCTACCGCAGATGATAGGGATGCCGTTCGCTTTTTCATTATTCAGAACAGGTGCCCGAATGACCTGGCTAGCGTCAGTATGGATGAGAACGGGGTCTCCCTTCAGGCGCGCTTCTCTGTGAAGCTGTTCAGGTTCGTGGGAGACTACAACAGCGTTTACCTGCACTGTGGCATCCTCGTGTGTGACAGCACTGCCGCCTCCTGCACCCCCGAACTGGGGCACTTGGGATCATCGTCGGCTGCCTGCTTCAGCTCACTCTCCTGCTCAACATCTAAACCACGGGGGCAAAACCACCAAGAGAAAGtgcccaccaccaccacccctctGGACACCCACACTTGGACAGTTCTGACGGGCTCCAAATGA

Function

GO: NA

KEGG:

id description
K18274 UMOD; uromodulin

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00010941 True 1542 mRNA 0.54 8 5151836 5156195

Neighbor

gene id symbol gene type direction distance location
AMCG00010933 NA coding upstream 71480 5079208 ~ 5080356 (+)
AMCG00010918 NA coding upstream 579293 4570100 ~ 4572543 (+)
AMCG00010916 NA coding upstream 901788 4239933 ~ 4250048 (+)
AMCG00010915 fhl3,LOC107587754,LOC107716861,LOC107704953 coding upstream 922908 4220702 ~ 4228928 (+)
AMCG00010912 meaf6,LOC106589015 coding upstream 975836 4171483 ~ 4176000 (+)
AMCG00010936 NA coding downstream 3815 5160010 ~ 5160444 (+)
AMCG00010935 NA coding downstream 10399 5166594 ~ 5169607 (+)
AMCG00010943 rps6ka1,LOC107654838,LOC107721568,LOC107711701,LOC107697698 coding downstream 98900 5255095 ~ 5274132 (+)
AMCG00010942 NA coding downstream 127621 5283816 ~ 5284298 (+)
AMCG00010951 NA coding downstream 348182 5504377 ~ 5511682 (+)
G103258 NA non-coding upstream 11115 5134227 ~ 5140721 (+)
G103152 NA non-coding upstream 532180 4536337 ~ 4619656 (+)
G103150 NA non-coding upstream 713700 4437877 ~ 4438136 (+)
G103137 pou3f1,LOC107700687,LOC107716828,LOC107755232,LOC107597138 non-coding upstream 861156 4288023 ~ 4290680 (+)
G103035 NA non-coding upstream 1558429 3592668 ~ 3593407 (+)
G103316 id3,LOC102304963,LOC106610662,LOC101474249,LOC100706678 non-coding downstream 197574 5353769 ~ 5355664 (+)
G103333 NA non-coding downstream 300163 5456358 ~ 5460573 (+)
G103348 NA non-coding downstream 393863 5550058 ~ 5613434 (+)
G103354 qki,LOC106922399,LOC103458862,LOC103144233,LOC107094928,LOC101469882,LOC107721620,LOC106947196,LOC107590898,LOC107697705 non-coding downstream 460863 5617058 ~ 5652821 (+)
G103360 LOC101158568,LOC103376478,LOC107695181,LOC102780806 non-coding downstream 512930 5669125 ~ 5694122 (+)
AMCG00010922 NA other upstream 509433 4634472 ~ 4642403 (+)
G103078 NA other upstream 1068250 4049938 ~ 4083586 (+)
G103030 NA other upstream 1571559 3577235 ~ 3580277 (+)
G102947 NA other upstream 1708302 3436618 ~ 3443534 (+)
AMCG00010888 NA other upstream 1723407 3421082 ~ 3428429 (+)
AMCG00010979 NA other downstream 1230841 6387036 ~ 6395484 (+)
G103542 NA other downstream 1485788 6641983 ~ 6642628 (+)
AMCG00010990 pum1 other downstream 1736202 6892397 ~ 6920931 (+)
AMCG00010994 NA other downstream 1915238 7071433 ~ 7103508 (+)
G103939 yars,LOC107724337,LOC107687080,LOC107709269 other downstream 3392168 8548363 ~ 8552605 (+)

Expression


Co-expression Network