AMCG00010944


Basic Information

Item Value
gene id AMCG00010944
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 5175899 ~ 5203631 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00010944
GCGCAGCGCATACCTGGCGGTGGGAGTGCCCAGATCTGCGGCTCATCCGCTCTCCTGCTGCGGGCTGTCGGGAGGGTCTAGTGACGGATCCACTCCGGATTAAGAGCCCGACTCCCACAATGGAGCCCATTGTATCCTGGGACCGACATCGAGTGGCCGAGTGGCTGAAAGGTCTGGACTCTGTCCTTCAGCATTATCCATTCGAAGAGTGGTCGTTGACGGGGAGAGACCTGCTACTGCTGTCCTACAAGGATTTGGAGAAACTTGGGGTGAAGAAGATCGGCCACCAAGAACTCATACTGGAGGCTGTGGAAAAGCTCTGTTCACTGAACTACGACATGATGGGCGAGAGCATGCGCTCGCTGACCGAGAAGCTCCGAACGATCGCCCACTCCCTGCCGGTGAGCATCCAGAGCCGCTGGCGCGTCCACCCCTACACCGGCCAGTCGGAGAGCCAGCTTCCCTCGGAAACTCTCCTCTCCGTCATCAATGTCATCACGGCGGCCAGGGGGCTCTTCTGCTGGATCAACAGGTATCTCTTTTCTCAACTGCACGACTACACTGCCACTAAAGACATCATCACATACTGCGGGGAGCTGGGGCAGAGCGTCCACAAGGACATCTCCGCATTCGAGAAAGAGAAGGACATCATATCGTCTTGTCGGAAGATCGTGGCTATCTGTGATGAGATCCTGATCagcagcccccccaccctcctgaATCACACTGCCACCCTAGAGAGTGTGGACCTGGTGCCCGCTTCTCCCGGAGAAACCCTGGGAATTGAAATCACGTCCACTGACTCCATCCTGCACTACGTTACGGGAACTGCATCAGAGTCACCAGCTGGATTCAGTGAGAAGATCTTAGCAGGAGACGAAGTTATTCAAGTCAATGACCAGGTTGTGaaggAGCCCGAAGCCCCGGAGCCATTCTCCATCCTCCAGAGGGTCGCCGCCTCGGTGCGATCTCTGTCGTTCAAAGCTGCCACTCTGGAATCCCAGGAGCAGAAGGGGCTGGAGTCTGGATCGGGAAGGGGTGCCGGACCCCAGCCCATCAGTTCCCACCCCAACCACAAGGGGGAGCTCCAGAGCAAGGAGGGAATTCCACAGCTTAACAGAGCAGAACGGACAGAGTTGGACAGGGCTCTCTCGCAGGTCTCCCCCGAGGCCCCCCAGACTGAGGTCAGCAGCGCCGAGCTCCAGCTCCGCCAGGCCAGCCGTCTCAGTGTGACGTCCCGCAGCTCATGTCCCGAAATGGCCGGACAGAGTGACGAGCAAGACGCAAGTAGCCCCAACTCAAAAGGCACCCGGACGGGAATGAGTCGGAGGCGCGTGTCCTGCCGGGAGCTGGGCCGAGCGGACTGTGACGGCTGGttgtggaagaagaaaaaggacaGCGGGGTCTTCGTGGCTCAAAAATGGCAGCGATTCTGGTTCGTGCTGAAGGGTCCGAACTTGTACTGGTACAACAGCCAGCAGGAAGAGAAAGCTGAGGGCCTGATTCAAGTCTCCACCTACCGCATCGAAGGTGCCGGAGAGCACAAGAGGAAATATGTGTTTCAGGTGTGCCATGAGCGGTTCCAGACCTTTTTCTTCGCTGCCGACAACGTCAACGATATGAGCAAGTGGATCAACTGCTTAATAATGGCGATACAGAAGTATAAGAATGAGAAAAAGAACCAGCCGCACAGGGAAGAAGACTGTTACAGCGAGACCGAGCCCGAGGATGAAGGATCCAATTCCCCCCAGGCCTCCAGGCACAAAGGCAAAGAGAAGAAGAGGAAAGAGATTAAACTGAGCTGTGGGACGGCTCCTTTAGTTGCAGAAAAAAAGCCAGGCGCCCCTGAGGATGAGATGGGGGTCCTTTTTAACCGTCTCAAGGAGGGTGGGGTGTCACTGTTAGGCAACGAACAGCCAATGACCAGAGACCACTTCAGGAGGTCCTTCATCAAGAGAAACAAGAACCCCATCATCAATGAGAAGGCCCTTACACTACGGGCTCTGCAGAGCACACTCAAAgCAAAAGAGGCCGAGCTGCAAACCATCAACAAGCTCCTGGACAACCCCGAGCTGACGTCAACCAAGTTCAGAGAGTGGAAGGAGAGGAACGAGGAACTGTGCCAGGAAATCGACAAGCTGACCAAGGCCAAGGCCATGGCCAAGGGGGCGGGAGGAAGACCGGGAGATGAAAGGGAGGAGAGCGGGGGGTCGTTGCTGGACAAAGACCGCCAGAGCGCAGCCTTGTCTCCAGGAGAAGGAGACCCCTCGAGGGACAGCGTGTTCAGCTTGAGGTTGAGCCAAGGAGAGCAACTGGTAGACATGGATCCCACAGACTCCTACAGGGTGTCAGCTGTGGAATCGGTGGCCTCCACAcccatgcaaacacacactgcagacgCAACACCCCAGGGAGAGAATTATTTCTTCATATGAAGCTTTTattcatactttatttttaaatactctgaGCTCAAGATAACCCGAACAGTGTGGATATTTGACTTTTCCAACAACAACTGTGTCCATTTTGAACTGGTTGGAGACTTCTCCTCCTGTTTTTAAACTGCGAAAGGAGGCCAAGACTGTTGTGTAACAAAAGAACCAAAAAACTACAGACGTACGAGAGAACGAGATCCTAATTGTTCACTCAGTCTTCTAAAACTCATAATTTtgtcatgaaaaaaacaaaataatatatttttgttttgtgataattgtgTCTATTAGGGCAATGGTCTTTGGTTAaggtcccccccaccccctcctttATCCAAGTGTAATTTTATGTGTAGATTTTAataggaacatttattttttaaagaaaatgtcttaatacatgtatgtatatattggttttatattaaaataaccttttataGAAACCACACTGTAAAAATAACTCTACTGTAATGTTGATACAAATAATGGTAAGAGGAGTCAGTATTTCTAcagtatttctatttttaaacaaatgcaaaaagtagaATTATGCATTAaaccataatcatcatcataatagttATCAATGAGGTAGACTTGGATTATGATCACCTTAAAGGCATGAGGATAGGGTGCAACACTAACCAGTTAAgatactgtatttgtttatgaaatCTGTTCAGTTTCTTTGCCATTCAGTTACATTGCATTCAACAAGCAAGGAAGCATcactataaaacaaaaccaaaatgaaaatataggCAGTCAAAGCAATGATAAATTTGCCTGCGCATGTATTTAGTAACACTAAAGACACTGTACAGGGAGATGTAGATGTATACTATGTATTCAATTGGTTTACCTAAGAATCCATCAAATACTTTCAAACTTGCTTGCTGGGTTTTCAACTGGCTCAAATTTAAACGTTTGAAGGCAAAGTACGTTTTGGCAATTCTTATAAACTGTGATTAGAAATAATTTTCATCTTTTCATATGAACCTGCTAGCACTTTACCCATTACTTCTGTGGATttggtgtttattttgattagaAATGGCATGTGTTGGCCATAGTAGTATTTCCTTTCTGTTTATCACCTGGTTCCTAGTGTGTTGTGTACCATATATGAATGTttgatggggcaaatggccttattgatattattttgtatctcaGGCTTAATGTAAATAAGAAAGAATGGATAATTTTCCCACTGTTTGTGATGTCTGACCTCTTTAACACATTTCAATCCATTTCACTCGCAACAGACAAGTCATTCTGTCAAGTGATGTGTTTCATGACAAGGACTGGTTttggaaaaaaactgaatccACAGCTTTTCTTGATGGTCTGCTTTTTATCAATCACAACCTTGGTTATTAATTCTGTACGACACGTTTTGGAATCAATCTTCTTTTAAAATCATGTGCAGACAAATATCACATTTTAGTtgtgtaaattacatttacattacaagtACATGTCAGAAATGTGCATCAATGTCTGTTAGTAATAAACGTGTAATTACA

Function

GO: NA

KEGG:

id description
K23783 CNKSR1, CNK1; connector enhancer of kinase suppressor of Ras 1

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00010944 True 3970 mRNA 0.47 20 5175899 5203631

Neighbor

gene id symbol gene type direction distance location
AMCG00010938 dhdds,LOC107564097,LOC104959484,LOC104959477 coding downstream 26638 5141224 ~ 5149261 (-)
AMCG00010940 NA coding downstream 72502 5096591 ~ 5103397 (-)
AMCG00010934 LOC106605147,LOC101067841 coding downstream 145369 5002886 ~ 5030530 (-)
AMCG00010931 NA coding downstream 194446 4978936 ~ 4981453 (-)
AMCG00010932 NA coding downstream 278342 4894919 ~ 4897557 (-)
AMCG00010947 NA coding upstream 132215 5335846 ~ 5347367 (-)
AMCG00010945 id3 coding upstream 150312 5353943 ~ 5355562 (-)
AMCG00010948 NA coding upstream 170228 5373859 ~ 5383129 (-)
AMCG00010949 NA coding upstream 196658 5400289 ~ 5410795 (-)
AMCG00010950 NA coding upstream 211901 5415532 ~ 5431128 (-)
G103149 NA non-coding downstream 750327 4425354 ~ 4425572 (-)
G103095 NA non-coding downstream 1023151 4152518 ~ 4152748 (-)
G103094 NA non-coding downstream 1024982 4150499 ~ 4150917 (-)
G103087 NA non-coding downstream 1036262 4138620 ~ 4139637 (-)
G103050 LOC103376870 non-coding downstream 1391268 3784257 ~ 3784631 (-)
G103309 NA non-coding upstream 128101 5331732 ~ 5334257 (-)
G103329 NA non-coding upstream 156344 5359975 ~ 5378226 (-)
G103362 NA non-coding upstream 355046 5558677 ~ 5615853 (-)
G103473 NA non-coding upstream 1180850 6384481 ~ 6386604 (-)
G103503 NA non-coding upstream 1310232 6513863 ~ 6514123 (-)
AMCG00010939 NA other downstream 35390 5134053 ~ 5140509 (-)
AMCG00010937 NA other downstream 46758 5115715 ~ 5129141 (-)
AMCG00010925 srsf10,LOC108426370,LOC101486875 other downstream 525493 4642652 ~ 4650406 (-)
G103112 NA other downstream 989925 4169793 ~ 4185974 (-)
AMCG00010901 NA other downstream 1601084 3553986 ~ 3574815 (-)
AMCG00010946 NA other upstream 80699 5284330 ~ 5325424 (-)
G103395 NA other upstream 501139 5704770 ~ 5748564 (-)
AMCG00010966 NA other upstream 761502 5965133 ~ 5974307 (-)
AMCG00010988 NA other upstream 1424939 6628570 ~ 6644723 (-)
G103832 NA other upstream 2734506 7938137 ~ 8027031 (-)

Expression


Co-expression Network