AMCG00010957


Basic Information

Item Value
gene id AMCG00010957
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 5599919 ~ 5601213 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00010957
ATGTATGCAGACCTGATTGCCAAGGCTGTAGGAATCCATTTCAGATTCCGGGGGAGTGTGAGACGTGTGGCCATCGAGTTGTCTGATCAAATGCTCCAGAACCTGGAGAAGCTCGAGTATGGTGGCGGCATCACCCGCATGCTTTCCAGACAGGTCCGGCACTGCTTCTTCAGAACGGGCAACACCGTATATAAGAGCAGTGACTGTGAATCAGAGATGTTTTTCATTCAGAAAGGAGTGGCGGAAGTTTTGCCTTGTAATGAAGGGACTGTTTTGTTCACACTGAAGGAGGGACAGTACTTTGGAGAGGACAGCTTCCTTCACTCAGAGCCACGGGCAGCAACGATCAGAGCTGCTTCAAACTGTGATCGGTATGTGTTGACGAAGAAGAGTTTTGAGGAAACTCTTCAGTATTACCCAGAGATCTACCAGGAGATCAAGCAGGTTGTAGAGGATATAGTAAAGGAAATCCAAAAGACTAAATTGGAGGAAATTGCCACCAGGTCCCGGCTGCCCTTCAGCGACCAAGACCAAACCTCATCATGCCGCCAGAGACCGGGCCTTCTTAAATGTACGAGGGCCAGGGCTGAGGCACTGGAGTCCAGCCTGCCACTCTGGGTCTGCCTGGGCCATCATCTGGGCAGTCGACTCCTAACATGCTGTAGAAACATCAAGACCATTGAGCCAAAAAAAAACGTCCTGCGCTGGTATCAATATTTCTCTCCTGTGGTGACAGTTGTGCATTTCTGGTGTGTCACATATATGCTGGCTCTTTACTACGCCGATGTGAATCGCTATCCGTTTGCCGGTCTGTTCTGCTCAGCTGATCCGGCTTTTCTCAGTTTTAGTATTTCTAAGACAGGAAGAAAAGGCCATAACTTCAAGCCTTCAATCCGCCTGCTGAAATACCTCGTGCACTTCCTGCTGCTCAATCACTGCTGCGCTCTTGTGGCACTGAGCTGCCCAAGCGAGTGCATGCCAGAATCGACT

Function

GO:

id name namespace
GO:0006811 ion transport biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00010957 True 990 mRNA 0.50 4 5599919 5601213

Neighbor

gene id symbol gene type direction distance location
AMCG00010956 NA coding upstream 51 5593933 ~ 5599868 (+)
AMCG00010951 NA coding upstream 88237 5504377 ~ 5511682 (+)
AMCG00010942 NA coding upstream 315621 5283816 ~ 5284298 (+)
AMCG00010943 rps6ka1,LOC107654838,LOC107721568,LOC107711701,LOC107697698 coding upstream 325787 5255095 ~ 5274132 (+)
AMCG00010935 NA coding upstream 430312 5166594 ~ 5169607 (+)
AMCG00010962 NA coding downstream 332885 5934098 ~ 5939360 (+)
AMCG00010963 NA coding downstream 349213 5950426 ~ 5959972 (+)
AMCG00010967 NA coding downstream 375867 5977080 ~ 5977815 (+)
AMCG00010964 NA coding downstream 376637 5977850 ~ 5987680 (+)
AMCG00010969 kdm1a coding downstream 434278 6035491 ~ 6051667 (+)
G103333 NA non-coding upstream 139346 5456358 ~ 5460573 (+)
G103316 id3,LOC102304963,LOC106610662,LOC101474249,LOC100706678 non-coding upstream 244255 5353769 ~ 5355664 (+)
G103258 NA non-coding upstream 459198 5134227 ~ 5140721 (+)
G103152 NA non-coding upstream 980263 4536337 ~ 4619656 (+)
G103150 NA non-coding upstream 1161783 4437877 ~ 4438136 (+)
G103354 qki,LOC106922399,LOC103458862,LOC103144233,LOC107094928,LOC101469882,LOC107721620,LOC106947196,LOC107590898,LOC107697705 non-coding downstream 15845 5617058 ~ 5652821 (+)
G103360 LOC101158568,LOC103376478,LOC107695181,LOC102780806 non-coding downstream 67912 5669125 ~ 5694122 (+)
G103413 NA non-coding downstream 361876 5963089 ~ 5965939 (+)
G103416 NA non-coding downstream 366304 5967517 ~ 5990587 (+)
G103431 NA non-coding downstream 425747 6026960 ~ 6029057 (+)
AMCG00010922 NA other upstream 957516 4634472 ~ 4642403 (+)
G103078 NA other upstream 1516333 4049938 ~ 4083586 (+)
G103030 NA other upstream 2019642 3577235 ~ 3580277 (+)
G102947 NA other upstream 2156385 3436618 ~ 3443534 (+)
AMCG00010888 NA other upstream 2171490 3421082 ~ 3428429 (+)
AMCG00010979 NA other downstream 785823 6387036 ~ 6395484 (+)
G103542 NA other downstream 1040770 6641983 ~ 6642628 (+)
AMCG00010990 pum1 other downstream 1291184 6892397 ~ 6920931 (+)
AMCG00010994 NA other downstream 1470220 7071433 ~ 7103508 (+)
G103939 yars,LOC107724337,LOC107687080,LOC107709269 other downstream 2947150 8548363 ~ 8552605 (+)

Expression


Co-expression Network