AMCG00010958


Basic Information

Item Value
gene id AMCG00010958
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 5655019 ~ 5673677 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00010958
ATGCCCAGGACATTAGAGGGGTGGGGTTGCCACTGGCGGAGGAGGGCACTTGTGGACAAGGTGCTGGCATACCCTGACCATTCTCCCCACAATACGGGCATCCAGTATTATACAAAGGGCAATGGAGAAATCAACAGAGTACGGAAAGACATGTACAACGACACAGTCAACGGCCTTGTAGAAAAGCACCCTTTGGAATTACCAGAGCCAATGGGACCTATTGTACATCTACAAGAAAAACTCTTTGTGCCTGTAAAAGAATATCCAGATATTTATGAGACATCCTCCCAGGCCCCAGACATTCGACGCTGCCTCGCCGGGCGTTTGCCAGGGCCTGTGTTGAGAACGCACATATTGAGTGTTCAGCATCACTCCCCCTGCCAGGGATTGCTTCACTCCAGCAGCTCTATTGAAGCCTCTACCCCTATGAATGTTAGTTCTGAGACCAATGTGCTAGTGCTCAAATTCTCCAGTGCCCCAAACTGGCAGCAGCGATTAAGCTCGGTGGCTGAAGAGGAGCCGTTGGCCTCGCTGAGGCAGTTTCATTCCCAGGCTCTGAGCTGCAGCTCTGGGGgTGACAAGGACAAAGTATATTCTTCCCCTGTGccaaagcgtTAG

Function

GO:

id name namespace
GO:0003723 RNA binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00010958 True 618 mRNA 0.51 6 5655019 5673677

Neighbor

gene id symbol gene type direction distance location
AMCG00010954 qkia,LOC107697705,LOC107721620,LOC107590898,LOC107711937,LOC105908305 coding downstream 1991 5644276 ~ 5653028 (-)
AMCG00010955 qki,LOC107721620,LOC107697705,LOC107590898,LOC106922399 coding downstream 29490 5620295 ~ 5625529 (-)
AMCG00010952 NA coding downstream 165137 5482336 ~ 5489882 (-)
AMCG00010953 ythdf2,LOC107654833,LOC107697702,LOC107721611 coding downstream 176458 5466333 ~ 5478561 (-)
AMCG00010950 NA coding downstream 223891 5415532 ~ 5431128 (-)
AMCG00010960 NA coding upstream 19767 5693444 ~ 5693785 (-)
AMCG00010961 NA coding upstream 32090 5705767 ~ 5717218 (-)
AMCG00010959 NA coding upstream 74706 5748383 ~ 5768274 (-)
AMCG00010965 pacrg,LOC107697704,LOC107583491,LOC107695182 coding upstream 231469 5905146 ~ 5924778 (-)
AMCG00010968 NA coding upstream 304245 5977922 ~ 5989279 (-)
G103362 NA non-coding downstream 39166 5558677 ~ 5615853 (-)
G103329 NA non-coding downstream 276793 5359975 ~ 5378226 (-)
G103309 NA non-coding downstream 320762 5331732 ~ 5334257 (-)
G103149 NA non-coding downstream 1229447 4425354 ~ 4425572 (-)
G103095 NA non-coding downstream 1502271 4152518 ~ 4152748 (-)
G103473 NA non-coding upstream 710804 6384481 ~ 6386604 (-)
G103503 NA non-coding upstream 840186 6513863 ~ 6514123 (-)
G103539 NA non-coding upstream 950404 6624081 ~ 6627452 (-)
G103556 NA non-coding upstream 1081616 6755293 ~ 6762139 (-)
G103645 NA non-coding upstream 1442307 7115984 ~ 7171805 (-)
AMCG00010946 NA other downstream 329595 5284330 ~ 5325424 (-)
AMCG00010939 NA other downstream 514510 5134053 ~ 5140509 (-)
AMCG00010937 NA other downstream 525878 5115715 ~ 5129141 (-)
AMCG00010925 srsf10,LOC108426370,LOC101486875 other downstream 1004613 4642652 ~ 4650406 (-)
G103112 NA other downstream 1469045 4169793 ~ 4185974 (-)
G103395 NA other upstream 31093 5704770 ~ 5748564 (-)
AMCG00010966 NA other upstream 291456 5965133 ~ 5974307 (-)
AMCG00010988 NA other upstream 954893 6628570 ~ 6644723 (-)
G103832 NA other upstream 2264460 7938137 ~ 8027031 (-)
AMCG00011051 NA other upstream 3145874 8819551 ~ 8864051 (-)

Expression


Co-expression Network