Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00010968 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030133.1 |
| NCBI id | CM030133.1 |
| chromosome length | 32682731 |
| location | 5977922 ~ 5989279 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | description |
|---|---|
| K04279 | PTAFR; platelet-activating factor receptor |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00010968 | True | 927 | mRNA | 0.52 | 3 | 5977922 | 5989279 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00010965 | pacrg,LOC107697704,LOC107583491,LOC107695182 | coding | downstream | 53144 | 5905146 ~ 5924778 (-) |
| AMCG00010959 | NA | coding | downstream | 209648 | 5748383 ~ 5768274 (-) |
| AMCG00010961 | NA | coding | downstream | 260704 | 5705767 ~ 5717218 (-) |
| AMCG00010960 | NA | coding | downstream | 284137 | 5693444 ~ 5693785 (-) |
| AMCG00010958 | NA | coding | downstream | 304245 | 5655019 ~ 5673677 (-) |
| AMCG00010971 | dnajc8 | coding | upstream | 14684 | 6003963 ~ 6014817 (-) |
| AMCG00010972 | NA | coding | upstream | 39601 | 6028880 ~ 6032424 (-) |
| AMCG00010970 | NA | coding | upstream | 85332 | 6074611 ~ 6077628 (-) |
| AMCG00010973 | htr1d | coding | upstream | 183529 | 6172808 ~ 6173935 (-) |
| AMCG00010975 | hnrnpr,LOC105896414,LOC106562977 | coding | upstream | 404421 | 6393700 ~ 6398157 (-) |
| G103362 | NA | non-coding | downstream | 362069 | 5558677 ~ 5615853 (-) |
| G103329 | NA | non-coding | downstream | 599696 | 5359975 ~ 5378226 (-) |
| G103309 | NA | non-coding | downstream | 643665 | 5331732 ~ 5334257 (-) |
| G103149 | NA | non-coding | downstream | 1552350 | 4425354 ~ 4425572 (-) |
| G103095 | NA | non-coding | downstream | 1825174 | 4152518 ~ 4152748 (-) |
| G103473 | NA | non-coding | upstream | 395202 | 6384481 ~ 6386604 (-) |
| G103503 | NA | non-coding | upstream | 524584 | 6513863 ~ 6514123 (-) |
| G103539 | NA | non-coding | upstream | 634802 | 6624081 ~ 6627452 (-) |
| G103556 | NA | non-coding | upstream | 766014 | 6755293 ~ 6762139 (-) |
| G103645 | NA | non-coding | upstream | 1126705 | 7115984 ~ 7171805 (-) |
| AMCG00010966 | NA | other | downstream | 3615 | 5965133 ~ 5974307 (-) |
| G103395 | NA | other | downstream | 229358 | 5704770 ~ 5748564 (-) |
| AMCG00010946 | NA | other | downstream | 652498 | 5284330 ~ 5325424 (-) |
| AMCG00010939 | NA | other | downstream | 837413 | 5134053 ~ 5140509 (-) |
| AMCG00010937 | NA | other | downstream | 848781 | 5115715 ~ 5129141 (-) |
| AMCG00010988 | NA | other | upstream | 639291 | 6628570 ~ 6644723 (-) |
| G103832 | NA | other | upstream | 1948858 | 7938137 ~ 8027031 (-) |
| AMCG00011051 | NA | other | upstream | 2830272 | 8819551 ~ 8864051 (-) |
| AMCG00011058 | srrm1,LOC107583602,LOC107721297,LOC106579139 | other | upstream | 3232989 | 9222268 ~ 9236228 (-) |
| AMCG00011084 | dlgap3,LOC106933674,LOC106958363 | other | upstream | 3612098 | 9601377 ~ 9619279 (-) |
