AMCG00010972


Basic Information

Item Value
gene id AMCG00010972
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 6028880 ~ 6032424 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00010972
ATGGCAAAAGAAGGGGAAACTCCAAACAAGCCTGACAACACAGCATTCACCCAGCAGAGACTGCCTGCATGGCAGCCCATCTTGTCAGCAGGAATCGTTATCCCTGGTTTTCTTGTCATTGGACTGGCTTTCATTGCCATTGGTGTTGCACTGTTCATCACCTCCAGTAACATTCAAGTGTTGGAGATGGATTACACTGGTAATACTGCTAACTCCCCTTGTGCTCCCTGCACAaacaatgcaacacaaaactGCAAGTGCTCACTCAACTTTACGCTAAGCACAAAGTTTGAGGGCCCTGTTTACATGTATTATGGCCTATCAAACTTCTACCAAAACTTCAGAAGATATGGAGTTTCTCGGGACGACAATCAACTGTTTGGAGTCAGCAGTTCTATGCTGAATCCAGTGAACAACTGTGCACCATTCGACAGAGATGCCTACGGAACACCTATAGCACCTTGTGGAGCCATTGCAAACAGTTTCTTTAATGacacCTTCGTGCTCTTTCATAATGACACTGGACGGAACATTCCCCTGGATGGTAATGGAATAGCCTGGTGGACAGATTACAACATCAAATTCCGAAACCCAGGCCAGATAAATGGCAACTTGACACAGGCTTTTCAAGGGACAGTGAAGCCTTTGAACTGGCCAAAGCCGGCCTATGACCTAGACACCAACCTGAGCAATAACGGGTTTCTGAACCAGGACTTCTTGGTATGGATGAGGACCGCAGCTCTGCCAGATTTCAGGAAGCTTTACAGGAGGATCTCGGACACAGATTACGCTAGTGGCTTGCCTGCTGGGAATTACAGCTTGGAAATCTCGTACAATTTCCCTGTGCTAAGTTTCCAAGGCCATAAGAAAGTGGTGTTCAGCAATGTTTCCTGGATGGGAGGACAGAACCAGTTCCTTGGAATAGCCTACCTGGTGATCGGGTGTCTTTGTATAGTTATGTCAGTCATAATGCTGATTGTATATGCAAAGTTTCAGATCCCCGATGAGGAT

Function

GO:

id name namespace
GO:0016020 membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00010972 True 1011 mRNA 0.46 7 6028880 6032424

Neighbor

gene id symbol gene type direction distance location
AMCG00010971 dnajc8 coding downstream 14063 6003963 ~ 6014817 (-)
AMCG00010968 NA coding downstream 39601 5977922 ~ 5989279 (-)
AMCG00010965 pacrg,LOC107697704,LOC107583491,LOC107695182 coding downstream 104102 5905146 ~ 5924778 (-)
AMCG00010959 NA coding downstream 260606 5748383 ~ 5768274 (-)
AMCG00010961 NA coding downstream 311662 5705767 ~ 5717218 (-)
AMCG00010970 NA coding upstream 42187 6074611 ~ 6077628 (-)
AMCG00010973 htr1d coding upstream 140384 6172808 ~ 6173935 (-)
AMCG00010975 hnrnpr,LOC105896414,LOC106562977 coding upstream 361276 6393700 ~ 6398157 (-)
AMCG00010978 rpl13a coding upstream 368202 6400626 ~ 6404255 (-)
AMCG00010980 NA coding upstream 381715 6414139 ~ 6415012 (-)
G103362 NA non-coding downstream 413027 5558677 ~ 5615853 (-)
G103329 NA non-coding downstream 650654 5359975 ~ 5378226 (-)
G103309 NA non-coding downstream 694623 5331732 ~ 5334257 (-)
G103149 NA non-coding downstream 1603308 4425354 ~ 4425572 (-)
G103095 NA non-coding downstream 1876132 4152518 ~ 4152748 (-)
G103473 NA non-coding upstream 352057 6384481 ~ 6386604 (-)
G103503 NA non-coding upstream 481439 6513863 ~ 6514123 (-)
G103539 NA non-coding upstream 591657 6624081 ~ 6627452 (-)
G103556 NA non-coding upstream 722869 6755293 ~ 6762139 (-)
G103645 NA non-coding upstream 1083560 7115984 ~ 7171805 (-)
AMCG00010966 NA other downstream 54573 5965133 ~ 5974307 (-)
G103395 NA other downstream 280316 5704770 ~ 5748564 (-)
AMCG00010946 NA other downstream 703456 5284330 ~ 5325424 (-)
AMCG00010939 NA other downstream 888371 5134053 ~ 5140509 (-)
AMCG00010937 NA other downstream 899739 5115715 ~ 5129141 (-)
AMCG00010988 NA other upstream 596146 6628570 ~ 6644723 (-)
G103832 NA other upstream 1905713 7938137 ~ 8027031 (-)
AMCG00011051 NA other upstream 2787127 8819551 ~ 8864051 (-)
AMCG00011058 srrm1,LOC107583602,LOC107721297,LOC106579139 other upstream 3189844 9222268 ~ 9236228 (-)
AMCG00011084 dlgap3,LOC106933674,LOC106958363 other upstream 3568953 9601377 ~ 9619279 (-)

Expression


Co-expression Network