AMCG00010977


Basic Information

Item Value
gene id AMCG00010977
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 6423566 ~ 6442741 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00010977
tcCAGCAGGTGCAGACGCCCAGGGGAGTGCTATGTAGCAGCTGATCCGAAGAGCAGAGCAGTCATACCTGAGCTTTGAGAATGGGCTGTGTCCACTGCAAAGAGAAAGCCTCCGCCAAGGCCCAGGGAGTGGTGGCTGACGGCAACCTGCAAGCCTCCAACCCGCGCTATGGCCCCGATCCCACCAATCAGAGCCTCAGCCGCATCCCCGACTTCAACAACTTCCAGAACACGCCCGTCTCTGTCGCCACGCCCTTTGGAGGCTCCTCCCCCTACCCATCTGCCACCCTGCAGTCCCGGGCAGGTGGCAGCATCACAGgTGGCGGTGTGACCCTGTTTGTGGCCCTTTACGACTACGATGCCCGCACTGAAGACGACCTCACCTTCAAGAAGGGCGAGAAATTCCACATCATCAACAACACGGAAGGGGACTGGTGGGAGGCGCGGTCTCTGGACACAGGCAATAATGGTTACATTCCCAGCAACTACGTGGCCCCAGTGGACTCCATACAGGCCGAAGAGTGGTATTTTGGCAAGATGGGACGTAAGGATGCAGAGAGAATGCTGCTCTGCCAGGGCAACCCCAGGGGCACCTTCCTGATCCGAGAGAGCGAGACCACCAAAGGAGCCTACTCCCTGTCCATCCGTGACTGGGACGATGTGAAGGGGGACCACGTAAAGCATTACAAGATCCGCAAGCTGGACAACGGCGGCTATTACATCACAACGCGGACGCAGTTTGACACTGTGCAGCAGCTGGTGCAGCACTACACAGACCTGTCCGTCAAAACCAAAGACGTGTGGGAGATCCCTCGAGAGTCGCTGCAGCTCATAAAGAAACTGGGCAATGGGCAGTTTGGGGAAGTCTGGATGGGTAGTAACGATGGCTTGTGCTACTATCTAACCAAGGCCTGCCCCAACGCCACCCCTCAGACACTGGGCTTGGGTAGGGATGCCTGGGAAATCTCCCGTGAGACCCTCAGCCTGAACAAAAAACTGGGGCAGGGCTGCTTCGGAGACGTGTGGATGGGAAGCTTGCTGGACTTCTTGAAGGATGGAGATGGGCGGAGCCTGAAGCTGCCTCAGCTGGTTGACATGGCAGCCCAGGTACGGttgaaatgtaatgcttgtTTGTCTCCAAGTGCTCCCGAAAGGCATGGGATGAATAACCGCGAGGTGCTGGAGCAGGTGGAGCGGGGCTACAGGATGCCCAGTCCTGCAGGCTGCCCCGCCTCGTTGCACGAGCTCATGCTGCAGTGCTGGAAGAAGGATGCTGATGAGAGGCACACCTTTGAGTATCTGCAAGGCTTCCTGGAGGACTACTTCACTGCCACTGAGCCACAGTACCAGCCTGGGGAGAACCTCTGAGCTAGGGGCGCCCCCTTCACCCCGAGAGGCTTGGCGGGCGTCTAGGCAGAGCGGCGCTGAGGCCACTCCTGGCTTTCTGCTACCAGCTCCCTTCCCTCCGTCACTGTTAATCCTCCACTGTCAATGACTTGACTGCGCTCAAATGTATTCTCCCCTGGGAGTTTCCTGATGAACAGAGACAAAAACAAGATCACCTTGGACCACAAACCAGACCAGAAGAAGGGAATATgaaccctttttttttgttttgtctttatttgtttttgtttgtatgttgttgtttttttgcttcagCTTCAGCACCAAAATGAACCTATAGGTGATCTCAGTACACTCCAGGGAGGTGGGATTTTAAGAGGGTGATGAGGGCAGTGGGGAGGTAGTGAAGGGGgtagcactttttttttttccctctgccAATGCGTTGCATTAAATTAGTcaatttttacaattttatttccccccttaaGGGGCATGGATTTTGTGGGTTAGTTGGGAGGAGGGTTTattaagtattgtttttcttatagaactgtttttaaatttcttttggttattgttattttccattatgttatgattatttaataCATGCTCTGAAAAGTCAAGTTTCTTGGAGTTTTGTTTGCGTTTTACATTGAACCTAGAAACATAGTTTTCACCTACAATACATGTTAAAAGCTTTTGAATTCCGTTTGGGTGCTTAATTTGGGtcctcgtctctctctcttaggCCGTCTAGACTaagttcttgttttattttctcccccatTATAATATACAGTTATGGCCTACATTGTAATGGCCAACACGGTTAGAGAATGGAATCTTTCATGGCATAAAATAAGATCTCAGGAAGATATGGCTCAGATTTACTTGCAGCTCAGTGCAGAAACTGTGAATAAAGGACAGATGGCAAATCTGGGTTTCTGAAGGAAAATGCTGAGCTACATTGTACACAGTTGGCAATCCAGAGGTTACACCATCTGGCTGACTGTTTGGAGGTGAACCATACACAAATAATCACTGTTGTCATTCAGTCGAGGCTTTGATCCAGATTGACAGAGACTTCGAAGTGAATTATACATCTACATATGCAACTGCAAACGGAAGTCCACTACAGACATTTGCAGTAGGCTTTTGGTGTCTTCCACTCATCCAAAAGACAAAGCACAAACCCATTCGGTCACTTCAAGGTAACACAAAATGGAAGCGTTGCTGTGGAGCAGCACTGTAGGCCAGGGACTTCCATATTCAGACAGACTTTACAGTAGGAAGGAGTATATGagtatatatatgaatattctGTCAGACTTGCCATAGATCCATTGAGTGTGGAACACCaccaaaaaaatctatttaaatccTTATTGAATTACctagaaaaaaatgtttgtttttctttttttgtgcgTGATAATACCAAAGGATTCCTCTCCGAATTCACTTCACGAGCAAGTGGCAATTGTCTAGAAATTtgtaatttaagttaatttaactTGACGAGACTCAAATCACTTAACCAGGCTATAGACTATTAAAGCAGACGTTTAACATATTAACGACCCCAAACGCGATTCAGATCTTTTTTTTGGTGGGATCCTATACTTTTGTGTTAAGGGAGATTTTAATGATGGAGTGAAAAACAACATGTGGAATTCATCATTTTAACAAAGGAGGACCATTGACCTCATGAGCTGTGGAGCTGTTTAGGTGAGGTATTAGAGGCTTTGACGGTGTGAAGCAAACTACTTCAGTGCATTCctctacttttattattttctttttattctctttgtttgttttgtttatgacgTGCGTGAAGCCATCACATTGAACTGAGTGATGGGGATCTGGTTGTCTTTCAACCCACAGACCATGCAAAGAATGCAGGATTGTCTGGATTCGGGAACACCATGGTGCAGTCTCCTTGCATGTTCAGCACTGTGATTTTCTATGGACTACATTTCACCGAGGCCTGCAAGGAAGGACCAGACTTAACTATGGTGTGGCCAAAGAAACCCTGCCAGCACGCACACACTGTCTCATTCTGTTGGAGATCTGCAGCTGGGACCGGCCTCATAGGTTGCATCTCAGATAATTGtatgtcaaatgtattattaattaggTCTCTCTTGCTGCTCTTTgggttttttgttggtttgttttataaaatgcataattgttTCTAACTCCCTGTGCTCATTCTGaactgtacatttgtaaaagaACTTTTGAAAACTCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00010977 True 3612 mRNA 0.47 10 6423566 6442741

Neighbor

gene id symbol gene type direction distance location
AMCG00010976 NA coding downstream 789 6419382 ~ 6422777 (-)
AMCG00010980 NA coding downstream 8554 6414139 ~ 6415012 (-)
AMCG00010978 rpl13a coding downstream 19311 6400626 ~ 6404255 (-)
AMCG00010975 hnrnpr,LOC105896414,LOC106562977 coding downstream 25409 6393700 ~ 6398157 (-)
AMCG00010973 htr1d coding downstream 249631 6172808 ~ 6173935 (-)
AMCG00010984 NA coding upstream 33241 6475982 ~ 6509923 (-)
AMCG00010983 NA coding upstream 77829 6520570 ~ 6535796 (-)
AMCG00010982 NA coding upstream 113907 6556648 ~ 6560924 (-)
AMCG00010985 NA coding upstream 151914 6594655 ~ 6612752 (-)
AMCG00010987 NA coding upstream 322085 6764826 ~ 6775506 (-)
G103473 NA non-coding downstream 36962 6384481 ~ 6386604 (-)
G103362 NA non-coding downstream 807713 5558677 ~ 5615853 (-)
G103329 NA non-coding downstream 1045340 5359975 ~ 5378226 (-)
G103309 NA non-coding downstream 1089309 5331732 ~ 5334257 (-)
G103149 NA non-coding downstream 1997994 4425354 ~ 4425572 (-)
G103503 NA non-coding upstream 71122 6513863 ~ 6514123 (-)
G103539 NA non-coding upstream 181340 6624081 ~ 6627452 (-)
G103556 NA non-coding upstream 312552 6755293 ~ 6762139 (-)
G103645 NA non-coding upstream 673243 7115984 ~ 7171805 (-)
G103658 NA non-coding upstream 746344 7189085 ~ 7189583 (-)
AMCG00010966 NA other downstream 449259 5965133 ~ 5974307 (-)
G103395 NA other downstream 675002 5704770 ~ 5748564 (-)
AMCG00010946 NA other downstream 1098142 5284330 ~ 5325424 (-)
AMCG00010939 NA other downstream 1283057 5134053 ~ 5140509 (-)
AMCG00010937 NA other downstream 1294425 5115715 ~ 5129141 (-)
AMCG00010988 NA other upstream 185829 6628570 ~ 6644723 (-)
G103832 NA other upstream 1495396 7938137 ~ 8027031 (-)
AMCG00011051 NA other upstream 2376810 8819551 ~ 8864051 (-)
AMCG00011058 srrm1,LOC107583602,LOC107721297,LOC106579139 other upstream 2779527 9222268 ~ 9236228 (-)
AMCG00011084 dlgap3,LOC106933674,LOC106958363 other upstream 3158636 9601377 ~ 9619279 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) G385466 NA non-coding CI01000195 null 1277923 ~ 1285739 (+)