AMCG00010981


Basic Information

Item Value
gene id AMCG00010981
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 6493616 ~ 6509962 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00010981
ATGGTGGCGGATGAAGACTTCTCCAATGTAGTCCTGGGAGCGTCCATCGGTGAACACGATTCCCACCTTGGGAGCTCCAGGCCGGGAGCCATGGCCGGGCGTGAAGCTGTTGTCCAGGAGGTCTTTCTTGGTGTTGTGGCGTCCCAGGGGGAACTCCTCTCTCACAGAGCTGGAGTACTGCACCAGACCCACGTGCGCTTTGTTCTCTGCCACGTCCAGTTTGTCCACGATCTGGTTGATGAACTTCTTAACCAGCTCGAAGTTCTCGGGGCGCACGCTCTTGGAGCCGTCGATCAGGAACACCACGTCGGTGGCGACGCTGCAGGATTCTGGAGGAGGAATAGGGACAGGGAAAAGGATGGCACACGGTGTGCTGGCAATCTGCCGCAGGGTGTTCATGTCCACCCGGCCCACGCCGATGGCAAACAGCTCGATGTTCGACTCCTTGGCACGTGCGGACACGTCCCTCACATTGTCCTGTGGACGTCCATCCGTCACGATGATCGCCACCTGCACACCGCACAGAGGGAGTCGTACAGTACTGgatATGTAAGGTACCTTGCTGACGTCAGGGGCGTGTACACGGGCGCCCTCGATCTCGCTGAAGGCCACATTAATGGCGAACTGGATGGCCAGGCCGTTAACCACCCCCACGCGGGTGGCGTTGGGACCCACATCCAGCCCTTCGATGACCTTGGCCAGGAAGACCTTGACCTGCTCAAACTCAGAGGGGCGCACGCTCCGAGAGCTGTCTATGATGAAGACCAGGTGGCCAAAAAGCTGTCTCCCATCTCAGCTCCCACCCTGAAAAAGTGCAGAGTGGGCACAGGGCACCTTACCAGTCTGCGCGGCCGCATTCCTCAGCTGGGTTGTCGCTCTGCACTCCTGGCCAATGGCTATCAGGCTGAGCAGCAGCAATCCACAGGGCAGACACTTCATGGTTGCTGGGCAGTGGAGGACAAGTTACCGAGTGGCTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00010981 True 978 mRNA 0.59 7 6493616 6509962

Neighbor

gene id symbol gene type direction distance location
AMCG00010974 NA coding upstream 81820 6408918 ~ 6411796 (+)
AMCG00010969 kdm1a coding upstream 441949 6035491 ~ 6051667 (+)
AMCG00010964 NA coding upstream 505936 5977850 ~ 5987680 (+)
AMCG00010967 NA coding upstream 515801 5977080 ~ 5977815 (+)
AMCG00010963 NA coding upstream 533644 5950426 ~ 5959972 (+)
AMCG00010986 fabp3,LOC108426441,LOC105892250,LOC107669374 coding downstream 244962 6754924 ~ 6762123 (+)
AMCG00010989 snrnp40,LOC107593559,LOC106588762 coding downstream 265602 6775564 ~ 6782856 (+)
AMCG00010991 nkain1,LOC106570599,LOC107593567 coding downstream 361861 6871823 ~ 6881274 (+)
AMCG00010993 NA coding downstream 494121 7004083 ~ 7022923 (+)
AMCG00010995 NA coding downstream 597323 7107285 ~ 7110941 (+)
G103470 rpl13a,LOC107720993 non-coding upstream 89313 6400638 ~ 6404303 (+)
G103463 NA non-coding upstream 238078 6255224 ~ 6255538 (+)
G103459 NA non-coding upstream 340350 6152993 ~ 6153266 (+)
G103431 NA non-coding upstream 464559 6026960 ~ 6029057 (+)
G103416 NA non-coding upstream 503029 5967517 ~ 5990587 (+)
G103501 NA non-coding downstream 3350 6513312 ~ 6513818 (+)
G103538 NA non-coding downstream 113523 6623485 ~ 6627438 (+)
G103540 NA non-coding downstream 118526 6628488 ~ 6629990 (+)
G103541 NA non-coding downstream 127001 6636963 ~ 6637188 (+)
G103567 ppce,LOC107688393,LOC106923076,LOC103154994,LOC107592053,LOC107706142,LOC107654745,LOC106588491 non-coding downstream 397140 6907102 ~ 6927247 (+)
AMCG00010979 NA other upstream 98132 6387036 ~ 6395484 (+)
AMCG00010922 NA other upstream 1851213 4634472 ~ 4642403 (+)
G103078 NA other upstream 2410030 4049938 ~ 4083586 (+)
G103030 NA other upstream 2913339 3577235 ~ 3580277 (+)
G102947 NA other upstream 3050082 3436618 ~ 3443534 (+)
G103542 NA other downstream 132021 6641983 ~ 6642628 (+)
AMCG00010990 pum1 other downstream 382435 6892397 ~ 6920931 (+)
AMCG00010994 NA other downstream 561471 7071433 ~ 7103508 (+)
G103939 yars,LOC107724337,LOC107687080,LOC107709269 other downstream 2038401 8548363 ~ 8552605 (+)
AMCG00011076 zbtb8b,LOC107724281,LOC107584246 other downstream 3020512 9530474 ~ 9549520 (+)

Expression


Co-expression Network