AMCG00010982


Basic Information

Item Value
gene id AMCG00010982
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 6556648 ~ 6560924 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00010982
CGTCTCCGTACGAATCATTCATACTGGTGGGCAGAGAGGAGATAATCCGGATGTTTTCATCTGAAACGTTTGATTGAACCGAACCGTTGGCTGCAACTGCAGTTTTTTAAAGTATGAGATGACGGCTTGTGCTGGGATTTACTGAAGAGCAGTGCACAACCGCTGTACTGACTTTGATTTGTGCCAGGAGAACAAGACAACAGGTTTGAACACAGAACGCGAGAAAGAAGTGTCATGGAGTCCAGTGGAGAAAATCATTTGGTTCAGCAGGAAATCTGTGTGAAAGATGAAATGCCAGGAGGTGATGTTCTTCATGCAGAAAGGCAAAGCTCTCAAGGCGGGGGCTCTAAGTATGCAATGGCGGGGATTCGGCTCTCATCCACTGAGGAACAACAGCCCATCACTCACGGGAAGGATCTCAAGTCTGAGTGTGAGATCAAGACAGAGCAGCAGAACTACCCTGTCTGCTTCAACTCCCCGTCTCCCCAGGGAACCCCTTCACCCTCTTGTCTGGCTGTAATTTTGGCCGTGAAACAAGAGACCTCTTCAGATCTTCTCAAGGAGAGAGAGCGCGACCTGGAAAATCACAGCAGCAGACAACGAGAAGACGTCTGCGGTGATCTGAAAATGGAAGACGGCATTATGACGCAGCCGAGCGCGGTCTCGTCCAGTGTTCAGCATGGGCCCAACAGGAGCGCTAGCAACACACAGACTGGATCATCAGCATCGACTGGCTCTACTGTGAAAGCTAAGACTTCCCCCACCCGGGCTGCAGGAGGGAAGGGAGCTGTGCAGAATGTATACGGTTGTGACCGGTGTGACAAGAGTTTCAGTCGGTTGGGGACTCTCAGGGCACACCAGCGCGCACACCGGGAAAAAGTCCCTCTGGTCTGCTCCGACTGTGGCAAGACCTTCCGGGACTCCGCCAAACTGAAGATCCACCGGCGCATTCACACCGGCGAAGCGCCCTACCGCTGTGGCGAGTGCGGGAAGTGCTTCAAGGAGTCAGGGACGCTTACCAAGCACCGGCGCGTGCACACAGGGGAGACGCCCTACAGCTGCCCCACCTGCAGCAAGACTTTTAGCATCCTGGCCACTCTACGGCGGCACCAGCGCATCCACACTGGCGAGAACCCCTACAGCTGCCAGCAGTGCAGCCGCAGCTTCCGGGACTCGGGCAGTCTGCGCACCCACGAGCGCGTCCACACGGGCCAGACGCCCTACCACTGCGACACCTGCGGCAAGGGCTTCAGCCAGCTCGGCACGCTGAAGAAGCACCTGCGCACCCACACCGGGGAGCAGCCCTACCACTGCACCTTCTGCGGCAAGACCTTCAGCATCTCCGAGACGCTCAAGCGGCACCTGCGCATCCACACCGGCGAGAGGCCCTTCGGCTGCACTGTGTGCGGTAAGGGCTTCCGGGAGTCTGGCAGTCTGCGCAAGCACCAGCGCATCCACACCGGGGAGGCGCCCTACCACTGCTCCCAGTGCGGCCAGAGCTTCCGCGAGTCGGGCAAGCTGAAGATCCACCAGCGCATCCACACCGGGGAGACGCCCTACCACTGCTCGGTGTGCGGGAAGAGCTTCAGCCTGTCCGGCACGCTCAAGATCCACCAGCGCATCCACTCTGGCGAGACCCCTTACACGTGTGCCGTGTGCTCCCGGAGCTTCAGCCGGCTGGGGGCCTTCAGGAAGCATGAGCGCATCCATACGGGGGAGAAGCCTTACCTGTGCTCCCTGTGCGGCAAGGGCTTCAGGGAGTCAGGCAGCCTGAAGAAACACCTGAGGGTGCACTCCGGGGAGACGCCGTATCACTGCGCCGCCTGTGGGAAGAACTTCAGTGAGCTGGGAAACCTGAAGAAGCACCAGCGCGTCCACACGGGGGAGCGGCCGTACCACTGCGCCCGCTGCGGCAAGACTTTTGTCTACTCCGGCCAGATCAAGACACACGCCTGCAAAGCTCCTAAGACTGCCTCGGACAATAAAGACACTCAAATTAAACCTACAGATTCATGAAACCTTTACTGGTTGTGAAATTCACTGAATAATCCTCAAGGGCAgtatactgttaaaaaaaaaaaatctacgtAAGCTTTATttacttgttgttgttgttattaataataataatattactactactactattattattattaagattagACAGAGTGATTATGGGCACTACAAACCATGTATAATCCCTACTTCTACTGCCAGAGTCCCAGATCCTTGCATTGTTCGAAACACATGACCAGCTCcttaatcatataaaataacaaaaaaaaatgtaaatatatatttaagatgaGGCTCTTGTGGACTGTGGTATTCAATATGCTATGCCCTGTGAAATCCAGTCCTTTTTGTATCATCCTAAAAGATCTTAtcagaaatgcacacacttCACATCAAACCTAACAATAAAAGTGTGTTGCTGTTAGAACAGCGCTTTCTGCTTCCTGcttatatacagacgggtgacaaaggGAAAAATTagtaaatgagtggaggaacataacgaatgcagatgcctccaaac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00010982 True 2542 mRNA 0.53 3 6556648 6560924

Neighbor

gene id symbol gene type direction distance location
AMCG00010983 NA coding downstream 20852 6520570 ~ 6535796 (-)
AMCG00010984 NA coding downstream 46725 6475982 ~ 6509923 (-)
AMCG00010977 NA coding downstream 113907 6423566 ~ 6442741 (-)
AMCG00010976 NA coding downstream 133871 6419382 ~ 6422777 (-)
AMCG00010980 NA coding downstream 141636 6414139 ~ 6415012 (-)
AMCG00010985 NA coding upstream 33731 6594655 ~ 6612752 (-)
AMCG00010987 NA coding upstream 203902 6764826 ~ 6775506 (-)
AMCG00010992 ppce,LOC107654745,LOC107710331,LOC105909065,LOC107602379 coding upstream 364846 6925770 ~ 6938226 (-)
AMCG00010997 NA coding upstream 552711 7113635 ~ 7126366 (-)
AMCG00011003 NA coding upstream 747715 7308639 ~ 7309421 (-)
G103503 NA non-coding downstream 42525 6513863 ~ 6514123 (-)
G103473 NA non-coding downstream 170044 6384481 ~ 6386604 (-)
G103362 NA non-coding downstream 940795 5558677 ~ 5615853 (-)
G103329 NA non-coding downstream 1178422 5359975 ~ 5378226 (-)
G103309 NA non-coding downstream 1222391 5331732 ~ 5334257 (-)
G103539 NA non-coding upstream 63157 6624081 ~ 6627452 (-)
G103556 NA non-coding upstream 194369 6755293 ~ 6762139 (-)
G103645 NA non-coding upstream 555060 7115984 ~ 7171805 (-)
G103658 NA non-coding upstream 628161 7189085 ~ 7189583 (-)
G103666 NA non-coding upstream 670030 7230954 ~ 7233314 (-)
AMCG00010966 NA other downstream 582341 5965133 ~ 5974307 (-)
G103395 NA other downstream 808084 5704770 ~ 5748564 (-)
AMCG00010946 NA other downstream 1231224 5284330 ~ 5325424 (-)
AMCG00010939 NA other downstream 1416139 5134053 ~ 5140509 (-)
AMCG00010937 NA other downstream 1427507 5115715 ~ 5129141 (-)
AMCG00010988 NA other upstream 67646 6628570 ~ 6644723 (-)
G103832 NA other upstream 1377213 7938137 ~ 8027031 (-)
AMCG00011051 NA other upstream 2258627 8819551 ~ 8864051 (-)
AMCG00011058 srrm1,LOC107583602,LOC107721297,LOC106579139 other upstream 2661344 9222268 ~ 9236228 (-)
AMCG00011084 dlgap3,LOC106933674,LOC106958363 other upstream 3040453 9601377 ~ 9619279 (-)

Expression


Co-expression Network