AMCG00010985


Basic Information

Item Value
gene id AMCG00010985
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 6594655 ~ 6612752 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00010985
GTCATTTTCACAATTAAGTAATGCACGGACTTCAATTATTTCTCAGAGTTACACCCCCCATTCTCCTTCTTCTGAAATGGACTATCCTTGTTTCCGAGGGAAGCTAAAATTCACATGGATACATAGTTAAGTAGAAAACAAGTAACTTGGCGGATAATATCAGCTGAAGAGATGGAGGCGGACAAGAGCAAAGAAGAAAACGCCGCCGGCGAGTTTGttGCAGAGCGGGGGGGCCTGCTTTGTGACGAGCAAATAGAGAGTGAGTCCGAGAGCAGGGGGCCCAGGAAAAGGCCGTCCTGCGTGGAGGAGGAAAAGGAAGGTGCTGTGGAGGTGGTGGCTGAAGACGGGGATGATGTAGTAGAGCAGCAGGATGATGCCGAAAAggaggatgaagaggaggaggaggaggaagatgagaCTGGGAGGGAGATGGCAGATGGCGTAGAGACCCCTCCCATGCCTGCCTACCGCACGGTCATCATTGACAGCGAGCCAGTGGGGGGTGGTCCTGAGGAGAGCTGCATGGTCAGCTCTGAGGAGGACTTCTGTGTCCTGCAGGTTGAGGATCGTGAGACACCCCGGGAGACGGGGGAGTTTCTCGCTCAGGCTGGCGTGGAACCGGAGTGTCAGATGAACTTTGTGACCATGTGTGGACGGGTGACTGGGTTCTTTGATGCCCCGAAGAGGGAGCAGGCGGAAGGGACCTTCTCCCACATGCCAGCCCAGTACTGCACACAGGGCACTTCGGGTCTCTACCCAGAGGAAGATCACAAAGCACAGCAGGGCACTAAAAGGACCTATCAAACAATGGCCAGTCCGGATCAACAGCACACAGAGGGTGACATGAAGCTGGGACAGGTGGAGACCTCGTCAGCTGACACCTCATTGATGGTGCCTTCCAAAGTCCTCAACATGACAGAGTTCCAGCCGGTGGACCTCAAGGTCAACCCTGTGTACGCCACCCGGCGCTTCACTCGCTATGCTAACCGGGCCAAGGTGGCATATGCTCACTACCGGGCAGCTGGAGGAGGGGTGGCACCAGGAGACTGTGATGGCCTTAAACAGGATGAGGGAGCTGACAGTGGTCTGATACCTGCTCTGCCCAGGAAGAAGACTAGGACCCTCTACACCACCGACCAACTGGAAGAGCTAGAGAGCCTGTTCCAGGACGATCACTATCCGGATGGAGACAAGCGCAAAGAGATCGCAGCTGCAATAGGAGTCACACCACAGAGAATCATGGTTTGGTTCCAGAATCGAAGAGCGAAGTGGAGAAAGACTGAGAAGACCACCCTGAAGCAGGAGAAGAAGTTCACTGGAAGCAGTGCGACAGTGACATTGACCACCACCACCATCGCTGTCCCCCAAGTGACCAACCACATCCACCTTGCAGCCCCCACTGCTGGAGGCGGGATGCTGGCTACAGTCCACAGTCAGCCTATTGCCCCTCGGATAGCCATGCAACAGAGCCAGAGTCAGTTTAGCGGCATGATGCTGGGCTCCTCCAGCCCCTCAGGTATGGCACTTCCAGCGCACTGCATTCCTGGGGAGATTGGCCAGGCCTCGCTTGCTCCTCCTGCCCAGTTGGGGGCGCCGATGGATTACCTGCCCTCCATCCCCAGCCCCCCGCCCCTGCGTCGGGCCAGCCTGTCCCTGGGCACCTCCTTTAACCCAACCAATCACATCATCCCCCTGATGCTCGACACGCCAGAGAGCAGCTGCGCACAGCCCTCCCAGGATAGCCAGTCCAGGGAGAATCTCAACTACAGTCTGCAGAGTGAAAGCTCAGGGTCCAACACCTCATCGTTGTGTGACTACAGTGAGCACGTTGGCAGCTCTCTGAAAGTGGACACACAACAATATATCCACAGCAACCAAGGCACCAGTCAACTAGGGTCCTATCAGATGAGCTCCTATCCTCCGCAGCATAGCAGTCTTTTGGCTTCGCACAGCCTGAACCCAGGCCAGTTGCCGCAGTATCAGCGCCTGCCCTACCTCAACACCAACTGCCCCCCCAGTGCCAGCTTAGCGCCCACACCGCCCGTCGACTCCAACCCCTCCTACCTCGCCTTCGGAGCCACTGCCAACAACGGGGTCATGACCTACGCTGCCGGCGGGCGCACCTTCTTCCAGACACAGGGGGGCAACCAGATCCTATTGCAGCAGGGCGTCCATGGGGGAATCACAACGTTCCAGGCATTTCCGTGGAGCGACATATACGGTCAGACCAGCCAGTTTGCTCCCACACTTTATCAGAGAGCCCCTTACCAAAGCCTGGGCCGGGAGCAGAGCCTGTACCAGCAGGCCTCAAGCCTGGTGCCGGGCCAACATTACATCCAGGTTCAGAGGCCTTCTGCTGGGCCTGTGCAAAACATGTTCCAAGGGGCCCAGCGAATCGTCTCTGCCTCCAGCGTGTACCAGCCCCCGCGAGCCGCGCGCACAGATTTCCAGCCCCCAGAGCGCCCTGACAGCCAGGACACAGCAGGGGTGAAGAAGGAGTTGGATTCCGGCAACAATAAGTCCGATTACGATCCAACACAGCACAAACTTCCCGAGCAAGTCACGAGCCAGGCCTCCCGGGGGGCGGAGTCAGACGCCACGTTTGAGTGTGACTTTTCACCCATCCATTTCTGAATTCTGAATTGGATTCtgttattacaatatatagatgtttttttctctttctgtctgagGAACAGGGTCAGCACTGGCCTGAGAATAAGTCTGTACTTTGTTGCTGTTaaagctgaaaacaaaaatcctgtTATACCTACTTTTGATTTTGGATTCTTACTTCTATGTTATAATGAACAGGTTCCTCAACATGTAATCTGCTTCTAAAgctgtattaaaataacacattgttAAAATTTACACTGTGCCAATGATCAATAGTGGTTAATTTTCAGAATTTGGGTGCTACAACCATGTATAACCTTATAGGttcttccatttccatttcaaagccTATAAAAGGTGTAATATAGTTTGATTATTACTCCAAGCACTCTAAGAGACATTTATTGAGAAAATATTTGACAGGTCCCATTTTTCTATTGACAAGATGAATAGAAAGATGTTGAGAAAGAAGTTGCTCTCATTGACAGTCATCGTAAATCGTTTCAAAGCATTCTCAGGCTTGAGGAGAAACAGGCGGGGGTGAAGTAATTTGCATTAAGCTTAAGAATACATTTGGGTAAACCAAGGTAAACAGTACACGCTGATTACAAAAGGACCGAAATAAACCGATGACTTTAATGTCATCAGGTACAGAGAGGCAAACCGGTAACAGGAAGATCACTGAGAAAACAGTCATATCTCTGATGTAGCAGTCTATTGTTAGTGTGTTCCTAGCTCTGCCAAACAAGAGATGCAGACAGATGAGGTCAGGTTTGGTAGAACTGAGAATGGAAGAGCA

Function

GO: NA

KEGG:

id description
K24199 NOBOX; homeobox protein NOBOX

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00010985 True 3418 mRNA 0.52 8 6594655 6612752

Neighbor

gene id symbol gene type direction distance location
AMCG00010982 NA coding downstream 33731 6556648 ~ 6560924 (-)
AMCG00010983 NA coding downstream 58859 6520570 ~ 6535796 (-)
AMCG00010984 NA coding downstream 84732 6475982 ~ 6509923 (-)
AMCG00010977 NA coding downstream 151914 6423566 ~ 6442741 (-)
AMCG00010976 NA coding downstream 171878 6419382 ~ 6422777 (-)
AMCG00010987 NA coding upstream 152074 6764826 ~ 6775506 (-)
AMCG00010992 ppce,LOC107654745,LOC107710331,LOC105909065,LOC107602379 coding upstream 313018 6925770 ~ 6938226 (-)
AMCG00010997 NA coding upstream 500883 7113635 ~ 7126366 (-)
AMCG00011003 NA coding upstream 695887 7308639 ~ 7309421 (-)
AMCG00011006 NA coding upstream 752490 7365242 ~ 7390566 (-)
G103503 NA non-coding downstream 80532 6513863 ~ 6514123 (-)
G103473 NA non-coding downstream 208051 6384481 ~ 6386604 (-)
G103362 NA non-coding downstream 978802 5558677 ~ 5615853 (-)
G103329 NA non-coding downstream 1216429 5359975 ~ 5378226 (-)
G103309 NA non-coding downstream 1260398 5331732 ~ 5334257 (-)
G103539 NA non-coding upstream 11329 6624081 ~ 6627452 (-)
G103556 NA non-coding upstream 142541 6755293 ~ 6762139 (-)
G103645 NA non-coding upstream 503232 7115984 ~ 7171805 (-)
G103658 NA non-coding upstream 576333 7189085 ~ 7189583 (-)
G103666 NA non-coding upstream 618202 7230954 ~ 7233314 (-)
AMCG00010966 NA other downstream 620348 5965133 ~ 5974307 (-)
G103395 NA other downstream 846091 5704770 ~ 5748564 (-)
AMCG00010946 NA other downstream 1269231 5284330 ~ 5325424 (-)
AMCG00010939 NA other downstream 1454146 5134053 ~ 5140509 (-)
AMCG00010937 NA other downstream 1465514 5115715 ~ 5129141 (-)
AMCG00010988 NA other upstream 15818 6628570 ~ 6644723 (-)
G103832 NA other upstream 1325385 7938137 ~ 8027031 (-)
AMCG00011051 NA other upstream 2206799 8819551 ~ 8864051 (-)
AMCG00011058 srrm1,LOC107583602,LOC107721297,LOC106579139 other upstream 2609516 9222268 ~ 9236228 (-)
AMCG00011084 dlgap3,LOC106933674,LOC106958363 other upstream 2988625 9601377 ~ 9619279 (-)

Expression


Co-expression Network