AMCG00010987


Basic Information

Item Value
gene id AMCG00010987
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 6764826 ~ 6775506 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00010987
GCTGCGTGTGCCATAGAAATGCCCGTCGAGGGTCGAGTATACAGATCTGTCAACGCAGCGGAAGACGGAAGTGCAGgaATTTCCTCAAGGTGGTGCACTTAAGACACGCACAACAAACCGCATAATGGATGACTATAATAGGAAGCGTCAAGCCATGGAAGAATTGCCAGAGCTGTACAGCGTCCTCAGAGGAGAGGTTGCATCTATTATGGAATATGGAGCTTTTGTTAAGATCCCCGGCTTCCGGAAACAAGggCTTGTCCACAGGACTCACATGTCCTCCTGTCGTGTCGAAAACCCTTCCGAAGTAGTGGAGGTTGGAGAGAGGGTGTGGGTGAAGGTGATTGGCAGAGAGgtaCAAGATGAGAAAGTGAAGCTGTCTTTTTCAATGAAAGCTGTCAACCAAGGGACAGGAAAGGATCTAGATCCCAACAATGTGGCATTAGAACAAGACGAGAGGAGGAAGCGAGAATTCAGGGATTTCTCCCGGCAGAGGATTACCCTGGAGGCTGTTCTCAATACCACCTGTAAGAAGTGCGGCTGCAAAGGTCATTTTGCTAAAGATTGCTTTTCACAACCGGGTGGAGTCCAATATGGTCTACTACccgatgaggaggaggaggaggaaaaaggACGAGAGGGACTAATGGAGCAGCCCAGCCAGTCAGAGAAAACTGAACCTGCCAAAAGGAAGAAGGAGAAGAAgcccaagaagaagaagaagaagaagcagaagaagaagcagaaacGGCAGGATCCCCAGGAGAGCTCCTCTGACTCCGACAGCATGGACAGTTCAGACTCCagcgatgatgatgatgacgaccCCAGAGCTGCCAAGAGGCGGCGTTCTTCCAGCAAAAGGCACTCGTCCAccgaggagaagaagaagagcaaGAAGCACAAGAGACACAAGAGCAAAGCCCATAGGAAGCATGATTGACCGGCAGAGACTTCTTTAGGTGATGGACTTCATGGTGGAGATCACTTCCCAAGCCAAAGTGCTCAGCTGCATGCTTCATTGAGTCAGGGACCCAGCGTTGTATGATCTTTCAACATACGTGTGCCTCCGTTTTCTCAGCTCCCAGTCAtactgtgtgtttcaatgtAGCTTCCATTAATACTATATTTTTCTTCAGGAATCCAGCGCATGGTGTCACGTTCGGTCGGTTATAACAACTTCAGTTTTCCCTGCAAGTTTAGCAGCCTAGATTCCCAACAGTTGaggaattgaaaacaaattactaGAAGTAAAATTATGTTGGGTCTCTTCACTGTGGATTtaatataatcatttttttatatatatatatattttttatttttagttttattattgctctcattgttttgtgtttcttgtagATAACCATAATTTTGAATCGGATGTTATGTGACAAATGGTTGATCATCTAAAATATGGAATGCTGACCTTGCCATCTGATGGCTCCCGTAACGAAATAAAACCATCCCCCCTCCTTATACACCTATCAATTTTGAATTGATTGTCTGTCTTCTGGAGCTCATCGTGCACTTGGACCGGAGCCGTATACCTGACGATCTATTCAGTTGATTTCCATATATTTGGCTCTTGATTTGCTTCTGGGTTTGTTAAGTTATGCCACTATGCCACTTGCAGATGATC

Function

GO:

id name namespace
GO:0003723 RNA binding molecular_function
GO:0008270 zinc ion binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00010987 True 1645 mRNA 0.45 8 6764826 6775506

Neighbor

gene id symbol gene type direction distance location
AMCG00010985 NA coding downstream 152074 6594655 ~ 6612752 (-)
AMCG00010982 NA coding downstream 203902 6556648 ~ 6560924 (-)
AMCG00010983 NA coding downstream 229030 6520570 ~ 6535796 (-)
AMCG00010984 NA coding downstream 254903 6475982 ~ 6509923 (-)
AMCG00010977 NA coding downstream 322085 6423566 ~ 6442741 (-)
AMCG00010992 ppce,LOC107654745,LOC107710331,LOC105909065,LOC107602379 coding upstream 150264 6925770 ~ 6938226 (-)
AMCG00010997 NA coding upstream 338129 7113635 ~ 7126366 (-)
AMCG00011003 NA coding upstream 533133 7308639 ~ 7309421 (-)
AMCG00011006 NA coding upstream 589736 7365242 ~ 7390566 (-)
AMCG00011005 NA coding upstream 617466 7392972 ~ 7408696 (-)
G103556 NA non-coding downstream 2687 6755293 ~ 6762139 (-)
G103539 NA non-coding downstream 137374 6624081 ~ 6627452 (-)
G103503 NA non-coding downstream 250703 6513863 ~ 6514123 (-)
G103473 NA non-coding downstream 378222 6384481 ~ 6386604 (-)
G103362 NA non-coding downstream 1148973 5558677 ~ 5615853 (-)
G103645 NA non-coding upstream 340478 7115984 ~ 7171805 (-)
G103658 NA non-coding upstream 413579 7189085 ~ 7189583 (-)
G103666 NA non-coding upstream 455448 7230954 ~ 7233314 (-)
G103794 NA non-coding upstream 1001502 7777008 ~ 7779941 (-)
G103859 NA non-coding upstream 1280975 8056481 ~ 8056683 (-)
AMCG00010988 NA other downstream 120103 6628570 ~ 6644723 (-)
AMCG00010966 NA other downstream 790519 5965133 ~ 5974307 (-)
G103395 NA other downstream 1016262 5704770 ~ 5748564 (-)
AMCG00010946 NA other downstream 1439402 5284330 ~ 5325424 (-)
AMCG00010939 NA other downstream 1624317 5134053 ~ 5140509 (-)
G103832 NA other upstream 1162631 7938137 ~ 8027031 (-)
AMCG00011051 NA other upstream 2044045 8819551 ~ 8864051 (-)
AMCG00011058 srrm1,LOC107583602,LOC107721297,LOC106579139 other upstream 2446762 9222268 ~ 9236228 (-)
AMCG00011084 dlgap3,LOC106933674,LOC106958363 other upstream 2825871 9601377 ~ 9619279 (-)
AMCG00011086 NA other upstream 2965627 9741133 ~ 9743785 (-)

Expression


Co-expression Network