AMCG00010993


Basic Information

Item Value
gene id AMCG00010993
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 7004083 ~ 7022923 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00010993
ATGACCACAGCAATCTCAGTcaagatgaaaatgaaagttGAAATCGGGGACATGAGTCACTGGAAGGAGGCTGACTTTGCTTTGAACTGCACCTATATTGTCAATGACCAGCCCTGTGACCAGAGCACAAGCATCCCCAGGGCCAAAACCTCCATTCCACGAAACCTCACCTTCAAGTACAACCAAGCCAATGAGgtgACTGGAGTCTTCAGCAAAGAATATATCCCCCAGGGAACCAGGTTTGGCCCACTGCAGGGAGAAACCTACACCAAAGACAACGTTCCCAAGCATGCCAGCAGGAAGTATTTCTGGAGGATTTACTCTGGGGGGAGCCTGCACCATTTTGTTGATGGTTACGATTTGCACAAGAGCAACTGGATGCGCTATGTCAACCCTGCACACTCGCTCCACGACCAGAACCTGGTGGCCTGCCAGAATGGCAAGGAAGTGTACTTCTATACCATCAAGCCCGTGCCACCGCACAGCGAGCTGCTGGTGTGGTACAGCCATGAGTTCTCCAACCGGCTACACTGTCCCACTCCGGGAGACCTTCTGACCTCCAAATACAAGCACATAACCAAGGATATCAGGGATTCCTCTGTGGAAAGCCAAAAGCAACTGCTACCTCACAAAGGCACCTGCCTCACTGGAGACCAAAAACAAGAAGCTAACAGAACAAAGATGGAAGAGGAGAGGAGCgaaagagaggaggaagaggaggaggagaggattGATGTGGAAATGCTAGACAGAGACACCCCACCTGTCACTCCCGATGACCAAATAGTGGACTTCAGCAAGAAGCTTTATGAGCCACAGACCAAAAAGGAAATGCACTCCCCAGAGGAGCGAGGATGTTTCCCTGTCCATTCTGTGCGAGGAGCCAGCCCAACCCAAAGAGCAGAGAGCCCTGTGAAGCCCACGGGCCTTTACTGCTACTCAGAACAGACTACCTCACCGCAGAAAGAGATCCCCCTGCATCTGCACGGTCTCTACAGCCATGGCGAAGGCCTGGTGTCCTACCCGATGTATCCCCCATCCAGGCCTCTCCATCAGCCCTACCTCTACCCCTACAACTCACATTACCCACGCTTCCTGCTACCTCAGTACTCGCCACCCTTCCCCAACGTCTTCTCAAGGGTCCCCCCGGCCTACAGCAGCTACCTGGGCGGTGATGGGCTCTCTTACCCCCTGGTGTCACAGCCCAGCCTGCCCCCGGTGTCGCTGCCCTTCCCACCCCACGCTGGCTGCAAAGAGCTGGTCCCCCCCAGTCCCCCCAGCGCCTTCTCACGCTCTTCTTCCTACACGGGCGGGCTGAAGGAAAGACCCCCCAACAACTCTCCCCCCAGTGGGGCCCCAGCCACCCCCGAGCATTCCCCCCTGCCCAAGCCCCCGACACAGGCCGCTGACAGAGACGAAGCCATCAACCTCAGCACACCAAAGAACAGCCAGGCCTCCACCATCCTGGGCTACAAGTCACTGCCCTACCCCCTGAAGAAACAGAACGGAAAGATCAAGTACGAATGCAACATTTGCCTGAAGACCTTTGGACAGCTCTCCAACCTGAAGGTGTGTCACAAGCGATTCAGCAGTACCAGCAACCTGAAGACCCACCTGCGTCTCCACTCCGGGGAGAAGCCCTACCAGTGCAAATTGTGCTCCACCAAGTTCACCCAGTACATCCACCTCAAGCTGCACAAGAGGCTGCACAGCCGCGACCGGCCCTACAAGTGCCACCTTTGCTCCAGGTCCTACATCCACCAGTTCACCCTGCAGTACCATGCCAGGGGCTACTGCCCTTCATCCGCCATGGCGGGCCAGTCCCTGGAGGAGCTGAGCCGCATGAGCGAGGTCATCGACCGGTTTGACATGAGCAGCGACGCAGACGCGCTGGAGGAGCGGGCGAACCCGGTTGAGGTGGAGTCAGCCATGGAGAAGTGGTTCATGAAGAGCCTGGAGAAGAGGGAAGGCAAAGAGGACCATCAGGAGGGGTCTTTCTTCAAGAAGGAGAACCCTCACTTGCCAGCTTTCCAGGAGCGCGGCTCCGTCGTCCACATGTACAGACCCCAGACACACCTCCCCCTCACAGTGAAGAGGGAACTGCAGTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00010993 True 2109 mRNA 0.56 5 7004083 7022923

Neighbor

gene id symbol gene type direction distance location
AMCG00010991 nkain1,LOC106570599,LOC107593567 coding upstream 122809 6871823 ~ 6881274 (+)
AMCG00010989 snrnp40,LOC107593559,LOC106588762 coding upstream 221227 6775564 ~ 6782856 (+)
AMCG00010986 fabp3,LOC108426441,LOC105892250,LOC107669374 coding upstream 241960 6754924 ~ 6762123 (+)
AMCG00010981 NA coding upstream 494121 6493616 ~ 6509962 (+)
AMCG00010974 NA coding upstream 592287 6408918 ~ 6411796 (+)
AMCG00010995 NA coding downstream 84362 7107285 ~ 7110941 (+)
AMCG00010996 ppp1r8a,LOC105012537,LOC108441741,LOC105903676,LOC108272406 coding downstream 121816 7144739 ~ 7148896 (+)
AMCG00010998 NA coding downstream 134567 7157490 ~ 7165268 (+)
AMCG00011001 med18,LOC106605104 coding downstream 167298 7190221 ~ 7199316 (+)
AMCG00011000 NA coding downstream 180055 7202978 ~ 7203892 (+)
G103599 NA non-coding upstream 41892 6961986 ~ 6962191 (+)
G103567 ppce,LOC107688393,LOC106923076,LOC103154994,LOC107592053,LOC107706142,LOC107654745,LOC106588491 non-coding upstream 76836 6907102 ~ 6927247 (+)
G103541 NA non-coding upstream 366895 6636963 ~ 6637188 (+)
G103540 NA non-coding upstream 374093 6628488 ~ 6629990 (+)
G103538 NA non-coding upstream 376645 6623485 ~ 6627438 (+)
G103670 NA non-coding downstream 285682 7308605 ~ 7309609 (+)
G103684 NA non-coding downstream 350752 7373675 ~ 7384727 (+)
G103688 NA non-coding downstream 367079 7390002 ~ 7452292 (+)
G103678 NA non-coding downstream 372705 7395628 ~ 7398120 (+)
G103698 NA non-coding downstream 433838 7456761 ~ 7461153 (+)
AMCG00010990 pum1 other upstream 83152 6892397 ~ 6920931 (+)
G103542 NA other upstream 361455 6641983 ~ 6642628 (+)
AMCG00010979 NA other upstream 608599 6387036 ~ 6395484 (+)
AMCG00010922 NA other upstream 2361680 4634472 ~ 4642403 (+)
G103078 NA other upstream 2920497 4049938 ~ 4083586 (+)
AMCG00010994 NA other downstream 48510 7071433 ~ 7103508 (+)
G103939 yars,LOC107724337,LOC107687080,LOC107709269 other downstream 1525440 8548363 ~ 8552605 (+)
AMCG00011076 zbtb8b,LOC107724281,LOC107584246 other downstream 2507551 9530474 ~ 9549520 (+)
AMCG00011089 csmd2 other downstream 3180694 10203617 ~ 10271863 (+)
G104273 NA other downstream 3795765 10818688 ~ 10819423 (+)

Expression


Co-expression Network