AMCG00010995


Basic Information

Item Value
gene id AMCG00010995
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 7107285 ~ 7110941 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00010995
ATATATTATGTTTCTAAATCGATCTTATCCACAGGTTATAATGACTCCAGCATGGGGGGCGGATACACACAGTCCCCAGGTGGCTTTGCATCCCCCGGTGCCTCACAAGGAGAGAAGAAAACGAGAACACGATCACAGCAGATCGTCCCCTGCACGGTCTCCCAGCTGATGTCTGCCTCCCAGGCCGAGGACGTATTCAAAGTGGGAGGTGTGGAAGTGTCTCAGGTGACTTTAGTGGGCATCATTCGCAATGCAGAGAAAGCCCCGACCAACGTCCTGTACAAAGTGGACGACATGACTGGACCCCCTATGGACATCAGGCAGTGGGTGGACACCGATGAAGCCGGCCGTGAGAACATCGTCGTACCACCGGGCACTTATGTGAAAGTCTGCGGCCATCTTCGGTCTTTCCAGGGTAAGACCAGTGTGGTGGCATTCAAGGTGCGGCCCCTGGAGGACATGAATGAGTTAATCTCCCACATGCTGGAGGTGGTGCACGCACACATGCAGCTCAGCAAAGCCCAGACCATGATGGTGACTGATGCCATGAACCAGAGCCTGGTACCCACGTCCAGCAACATCATTGCGACAATGGGCGGAGGATACTCCGGGGCCAGCGATGCTGCCATGAATGGCCTCACGCCACATCAAAGCCAGGTGTTGAACTTGATCAAAGCCTGTGCCGATCAGCAGGGTGTTGGCATTCAAGACCTGAAATTGAGACTGAAGGCAATGAGCCTCGCAACTATCAAACAAGCAGTGGAGTTCCTCAGCAATGAAGGGCACATTTACTCCACCATCGATGAGGACCACTTCAGAGCCACGGACAATGAATAG

Function

GO:

id name namespace
GO:0003676 nucleic acid binding molecular_function

KEGG:

id description
K10739 RFA2, RPA2; replication factor A2

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00010995 True 837 mRNA 0.54 8 7107285 7110941

Neighbor

gene id symbol gene type direction distance location
AMCG00010993 NA coding upstream 84362 7004083 ~ 7022923 (+)
AMCG00010991 nkain1,LOC106570599,LOC107593567 coding upstream 226011 6871823 ~ 6881274 (+)
AMCG00010989 snrnp40,LOC107593559,LOC106588762 coding upstream 324429 6775564 ~ 6782856 (+)
AMCG00010986 fabp3,LOC108426441,LOC105892250,LOC107669374 coding upstream 345162 6754924 ~ 6762123 (+)
AMCG00010981 NA coding upstream 597323 6493616 ~ 6509962 (+)
AMCG00010996 ppp1r8a,LOC105012537,LOC108441741,LOC105903676,LOC108272406 coding downstream 33798 7144739 ~ 7148896 (+)
AMCG00010998 NA coding downstream 46549 7157490 ~ 7165268 (+)
AMCG00011001 med18,LOC106605104 coding downstream 79280 7190221 ~ 7199316 (+)
AMCG00011000 NA coding downstream 92037 7202978 ~ 7203892 (+)
AMCG00010999 NA coding downstream 118429 7229370 ~ 7230701 (+)
G103599 NA non-coding upstream 145094 6961986 ~ 6962191 (+)
G103567 ppce,LOC107688393,LOC106923076,LOC103154994,LOC107592053,LOC107706142,LOC107654745,LOC106588491 non-coding upstream 180038 6907102 ~ 6927247 (+)
G103541 NA non-coding upstream 470097 6636963 ~ 6637188 (+)
G103540 NA non-coding upstream 477295 6628488 ~ 6629990 (+)
G103538 NA non-coding upstream 479847 6623485 ~ 6627438 (+)
G103670 NA non-coding downstream 197664 7308605 ~ 7309609 (+)
G103684 NA non-coding downstream 262734 7373675 ~ 7384727 (+)
G103688 NA non-coding downstream 279061 7390002 ~ 7452292 (+)
G103678 NA non-coding downstream 284687 7395628 ~ 7398120 (+)
G103698 NA non-coding downstream 345820 7456761 ~ 7461153 (+)
AMCG00010994 NA other upstream 3777 7071433 ~ 7103508 (+)
AMCG00010990 pum1 other upstream 186354 6892397 ~ 6920931 (+)
G103542 NA other upstream 464657 6641983 ~ 6642628 (+)
AMCG00010979 NA other upstream 711801 6387036 ~ 6395484 (+)
AMCG00010922 NA other upstream 2464882 4634472 ~ 4642403 (+)
G103939 yars,LOC107724337,LOC107687080,LOC107709269 other downstream 1437422 8548363 ~ 8552605 (+)
AMCG00011076 zbtb8b,LOC107724281,LOC107584246 other downstream 2419533 9530474 ~ 9549520 (+)
AMCG00011089 csmd2 other downstream 3092676 10203617 ~ 10271863 (+)
G104273 NA other downstream 3707747 10818688 ~ 10819423 (+)
AMCG00011110 zn706,LOC103364770,LOC104931588,LOC101168967,LOC102235987,LOC101064701,LOC103393878 other downstream 4533076 11644017 ~ 11651021 (+)

Expression


Co-expression Network