AMCG00010997


Basic Information

Item Value
gene id AMCG00010997
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 7113635 ~ 7126366 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00010997
ATGGGCTCTCGCTCAGGTTTCGGACAGGGAGAAGAGGGGAAAGATGGGGGTGGGGATGgcTCAGTGTACGAGGTATCCGGGAGTGAGGTGTGCCTGTCCACTGGAGACCTGGTCAAGGTGATTGACATTGAAGAGCTTGCGGTCAGCTGTGAAGATGTCAGTACGAAGGAGACATTCGAACTGCCCCTCAACTACAAAGGGTTGTTTAAGCTGGTGCCAGAGGTGCTGCCCTTCTCCACGATAGAGGAGATTGTGGGCCTGGTGTCTATGGACAGGGACGCCAGCGCTCGCTTCACTTTCACCACTTGCCACCCATTGCCCCTGGAAAGCTGCAGCATTCAGGGTGGTGATGTGCTCACCTTCCTGTCCGTGGAGAGCCTAGGGGACAAGCGCTGCGCTCGCTGTCAGCTGCGGGCCTACCAGGACTCACCGGAGGTCCTGATCCCACTGTCCTACCACGGGGAGTTCTACGAGTGTGTGAATGATTACAACTACTCCCTGCAGGAGATCATATCCTCCCCCAGGCTGCACACTCGCCGCTTCCAGTTCCTCCAGAAGAAATCCACCAACCCAGCCAAGGGACCTCTGCTGCTCTCCCCAATACAGCAGGTCCAGGCCATTATGCACTTGAGAAAGAACATAGTGAAGTTTCCTTCAAACCTGGAAGTGGATGTGTTGGACGTCACAGAGCAGAGTCAGGATGTCAGCTTCATCACGCCCCTGTCCCTGGAGGAGGTGCTGTCCAAGCCAAATGAGGAGTTCCCCACCGTCTATGAGATCCTGGAGGGACCCAAGAACGGAACGTATTTCAAGTGCCAATGGATGTCCGCCTTAAAGAATGGCCAGCACCTCGTCCTGCACGGCCACCAGAACTGCAACATGGTCCTGGCTTCCAGCATTATGGGCAAGAAAGGCAAACAGCACTTCCTGATCTCAGAGAGCTATGGTGGGCGCCTACGCAGACGACCAAGAGAGTTTACCAATGTCTACGACCTCTTCACTGCCTCGAGCCGAACTTCCGGCCTCAAAGTCAACGTCACCAAGCACTGCGAGTCCCTGGAGGACGATGTGCCTTCACTGAGTGTCGGGGAGACGCTGGAGAAGCAACTAAACTGTGATGGAGAGCAGCAAATCATGGATGTTCTGGTTTGCAACCGGGCACTGGATGAggatgatgaggatgatgagGAGAACCAAGAGCAGAGCGAACAGATCTTCTTGCCCATGTACTTGGAGGGCAACTTTGTTGAAAAGCTTACCGACAACAAGAAGTACAGCCTGGTGGACATCTGCAAGCACTTTGTCTTGCCCATGGATGTCAAGGTGGCAGTGCGAGACTCCAAACTGGAGAAGGACCCTCTGGGGGGATTCTCAGCCTTGCACCTGGAAGAGGTGACTGTGGAGCCCGTGGTGCTGGCCAGCTTCCCCGACAGGCCAGACGTCTGCTTTGAGCTGCCCACCCGCTGGATGTCTATGTCGGTGTCACTCACCAACTATCCCCTCCCCTGGCTGGAGCAGCAACCCCCAGAGATGCACAGGGAGAGCGTCTATGAGATGACGGACGATTTCTACTACGAATTCCGCAAGCGCACCACCTTGGACATGCCCGGTCCTCCACGGCCGCCCAAGAGGAAGAAATCCACCCAACGCATGCAGGACAAGCCATCCTCTACTTCCACAGCTACACAGAAGTCCAAAGCTGTGCCCAATCCCCCCTCTATGAGCACCCTTCCCCCACAACTAGACAGGCTCACCATCAGCCCAGAAACACTGTCAGGTGTTCAGatttgtAATGCTAAGGGCTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00010997 True 1806 mRNA 0.55 6 7113635 7126366

Neighbor

gene id symbol gene type direction distance location
AMCG00010992 ppce,LOC107654745,LOC107710331,LOC105909065,LOC107602379 coding downstream 175409 6925770 ~ 6938226 (-)
AMCG00010987 NA coding downstream 338129 6764826 ~ 6775506 (-)
AMCG00010985 NA coding downstream 500883 6594655 ~ 6612752 (-)
AMCG00010982 NA coding downstream 552711 6556648 ~ 6560924 (-)
AMCG00010983 NA coding downstream 577839 6520570 ~ 6535796 (-)
AMCG00011003 NA coding upstream 182273 7308639 ~ 7309421 (-)
AMCG00011006 NA coding upstream 238876 7365242 ~ 7390566 (-)
AMCG00011005 NA coding upstream 266606 7392972 ~ 7408696 (-)
AMCG00011009 NA coding upstream 324703 7451069 ~ 7507166 (-)
AMCG00011008 NA coding upstream 403091 7529457 ~ 7551615 (-)
G103556 NA non-coding downstream 351496 6755293 ~ 6762139 (-)
G103539 NA non-coding downstream 486183 6624081 ~ 6627452 (-)
G103503 NA non-coding downstream 599512 6513863 ~ 6514123 (-)
G103473 NA non-coding downstream 727031 6384481 ~ 6386604 (-)
G103362 NA non-coding downstream 1497782 5558677 ~ 5615853 (-)
G103658 NA non-coding upstream 62719 7189085 ~ 7189583 (-)
G103666 NA non-coding upstream 104588 7230954 ~ 7233314 (-)
G103794 NA non-coding upstream 650642 7777008 ~ 7779941 (-)
G103859 NA non-coding upstream 930115 8056481 ~ 8056683 (-)
G103893 NA non-coding upstream 1041329 8167695 ~ 8167924 (-)
AMCG00010988 NA other downstream 468912 6628570 ~ 6644723 (-)
AMCG00010966 NA other downstream 1139328 5965133 ~ 5974307 (-)
G103395 NA other downstream 1365071 5704770 ~ 5748564 (-)
AMCG00010946 NA other downstream 1788211 5284330 ~ 5325424 (-)
AMCG00010939 NA other downstream 1973126 5134053 ~ 5140509 (-)
G103832 NA other upstream 811771 7938137 ~ 8027031 (-)
AMCG00011051 NA other upstream 1693185 8819551 ~ 8864051 (-)
AMCG00011058 srrm1,LOC107583602,LOC107721297,LOC106579139 other upstream 2095902 9222268 ~ 9236228 (-)
AMCG00011084 dlgap3,LOC106933674,LOC106958363 other upstream 2475011 9601377 ~ 9619279 (-)
AMCG00011086 NA other upstream 2614767 9741133 ~ 9743785 (-)

Expression


Co-expression Network