AMCG00010998


Basic Information

Item Value
gene id AMCG00010998
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 7157490 ~ 7165268 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00010998
ATGCACAACGAGCAGTTCCTCTGGTATTACAGCAGCCGCTTAGATACCCCTCGCTTTCTCCTGTTCAACGTTTCCAAATCGGAGGTGATTGGACCCGCTGGCTCGTCTCTGTGCGATAGAAAGACTATAATCCCCAACAGCTCCTGTCTGCTCATTGAAGCCCCGAGGGAAGTAGACCAAGGGCTGTACTCGTGTGATCACTGCGTCCGTGGCCGATGCAGCAGAAAGATCAACATTTCACTGTTCATCCTGAAGGATATGTCCTTCTTCGCCAATTCCGGACAAACGGTAAGGCTGAGTTGCAGATCCCGCAAATCGATCGTTCTGGATACAGTGCGGTGGTATTACAGCGCAGGCGCGGGACACAACCGCACCAGACTGTTCAATCTGCAACAATGGACTCTGAAACCCGCACAGCCACTGCGGCTACAGATGCTCCCTAACTCCAGCCTGGTCATCAGGGACGTCAGCGCCCAGGACACCGGAATATACACGTGTGATTTTTGCACTGACTCTGTTTGCAACACCATTAAAAGTGTTTCATTAAGTCTTAAGAAAGGCGAAGAAGCAGCCCTTACTCCACTAATGCCCCACAGCCTGCCTTTCCCTCCACAGAGGAAGGAGGTGGAGGGCCATGGCACGCTGGGCCTGGAGGACTCTATGGCCAGGCGGATGCAGAACGTTCCCTTCAGTGCAGGGTTATACAGAGACCTCCCCCAACGAGGCTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00010998 True 729 mRNA 0.53 3 7157490 7165268

Neighbor

gene id symbol gene type direction distance location
AMCG00010996 ppp1r8a,LOC105012537,LOC108441741,LOC105903676,LOC108272406 coding upstream 8594 7144739 ~ 7148896 (+)
AMCG00010995 NA coding upstream 46549 7107285 ~ 7110941 (+)
AMCG00010993 NA coding upstream 134567 7004083 ~ 7022923 (+)
AMCG00010991 nkain1,LOC106570599,LOC107593567 coding upstream 276216 6871823 ~ 6881274 (+)
AMCG00010989 snrnp40,LOC107593559,LOC106588762 coding upstream 374634 6775564 ~ 6782856 (+)
AMCG00011001 med18,LOC106605104 coding downstream 24953 7190221 ~ 7199316 (+)
AMCG00011000 NA coding downstream 37710 7202978 ~ 7203892 (+)
AMCG00010999 NA coding downstream 64102 7229370 ~ 7230701 (+)
AMCG00011002 scmh1 coding downstream 105916 7271184 ~ 7286271 (+)
AMCG00011004 NA coding downstream 126003 7291271 ~ 7295876 (+)
G103599 NA non-coding upstream 195299 6961986 ~ 6962191 (+)
G103567 ppce,LOC107688393,LOC106923076,LOC103154994,LOC107592053,LOC107706142,LOC107654745,LOC106588491 non-coding upstream 230243 6907102 ~ 6927247 (+)
G103541 NA non-coding upstream 520302 6636963 ~ 6637188 (+)
G103540 NA non-coding upstream 527500 6628488 ~ 6629990 (+)
G103538 NA non-coding upstream 530052 6623485 ~ 6627438 (+)
G103670 NA non-coding downstream 143337 7308605 ~ 7309609 (+)
G103684 NA non-coding downstream 208407 7373675 ~ 7384727 (+)
G103688 NA non-coding downstream 224734 7390002 ~ 7452292 (+)
G103678 NA non-coding downstream 230360 7395628 ~ 7398120 (+)
G103698 NA non-coding downstream 291493 7456761 ~ 7461153 (+)
AMCG00010994 NA other upstream 53982 7071433 ~ 7103508 (+)
AMCG00010990 pum1 other upstream 236559 6892397 ~ 6920931 (+)
G103542 NA other upstream 514862 6641983 ~ 6642628 (+)
AMCG00010979 NA other upstream 762006 6387036 ~ 6395484 (+)
AMCG00010922 NA other upstream 2515087 4634472 ~ 4642403 (+)
G103939 yars,LOC107724337,LOC107687080,LOC107709269 other downstream 1383095 8548363 ~ 8552605 (+)
AMCG00011076 zbtb8b,LOC107724281,LOC107584246 other downstream 2365206 9530474 ~ 9549520 (+)
AMCG00011089 csmd2 other downstream 3038349 10203617 ~ 10271863 (+)
G104273 NA other downstream 3653420 10818688 ~ 10819423 (+)
AMCG00011110 zn706,LOC103364770,LOC104931588,LOC101168967,LOC102235987,LOC101064701,LOC103393878 other downstream 4478749 11644017 ~ 11651021 (+)

Expression


Co-expression Network