AMCG00011008


Basic Information

Item Value
gene id AMCG00011008
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 7529457 ~ 7551615 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00011008
TCGCTTTGTAAGGTAACATCTGCAGGAGAACTCGATTTAGGTCGCGTTGTtgcagcgcagatttccgcagctctgcgccCTAGTTACTGCGCCGGACGCtgcccttttcttttcttctttctttttttctgaggTAGTTTTCGGAAAATGCTTGGTCATCCGAAAGTACGGAGTGCCTGTCATACTATGAATGAGATCACGGCTCACAGTACTCTCGGGAAGGCAGCAGATGTCGCAAGTCGCTGCTGCACTCCGCCGGCGAAGTTTGCGCAGGGGCGGGCCTGCTGGGAATGGGAATGTGCGCCTGAACAGCCGCGCTACCTGAGGAATTGCAGGAACATGGCTGCGCTGCGGACGCAAGGTGTGCTGACCTGAGACGCGCACCCTTTGGCCCATTTGTGTATCTCTGCAGAGACACTGGACGGGACATGGAGGCTTCCGAGCAGAGGACGGACCTCCACAACGACCCGAAGAGAGAGCACGGCAGGGTGTCCGCCGGCAGCTTCTGGCAGGACCCGCTGGCTATAGAGTTGAGCCACTCCAGCAAGAGCGCGGTCTCCCCCCGCAGCCGGACCCGGGCCGTGACGGTGGTGTTCATCGCGGTGGAGGACGCGTCTTTGCCGCAGACGGAGGGCAACCTGTCGTTGAAATGCCTGGCAGAAGCCTGTGCCAGTGCCCACGCCGCGCTCCTCACCATCCCGTTGGAGAGGCTTGCGCTGGGAAGCACGGATATTCTGGACAGCTTCTATAACGCAGatgttGCTGTGGTGGAGATGAGCGACTCGTTCTGCCAGCCTTCTCTCTTCTACCACctgggtgtgagagagagcttCAGCATGACCAACAACGTCATCCTCTACTGCAACAGACAGCAGACTGATCTCCAAGCATTGAAGGAGCAATGTGGAAGCTACACCTTTATTCCCTACATGGTGTCGCCCCAGGGGAAGGTGTTTGCCTGCGACATAGGCTTGATGAAGTGCCTCAACGAGATCCTGCAGCCCAGCTTCATGATTGAGCCTCTGTTCACCCCGCTGGTCGATCGTCTGGTGAAGCTGTTAGATAGCACTCACATTCACTCGTGTGAATATTTCCGAGAGACGATCCGGCACAACATTCGAACAGCGAGGGAGAGGTACAGTGGGAAGGAGCTGAGTCTGGAACTGGGCCGGATCCAGCAGCGACTGGACAGTGTAGAACTGCTGAGTCCAGACATCATCATGAACCTGCTGCTGTCCTACAGGGATGTGCAGGACTACGACGCTATTATTAATCTAATTGAGACCTTAAATAACCTACCGACGTGCGTTGCAGCTATGCAGCAGAACATAAAGTTCCACTACACCTTTGCACTAAACAGGAGGAACCATCCTGGGGATCGGGAGAAAGCCCTGTCTGTCATCCTGCCCGTGGTGGAGTCCAGGGAGCGCGTGGCCTCGGACCTGTACTGTCTCTGCGGCCGTATCTACAAGGACATGTTCATCAGCTCGGGTTTCACTGACCACGTTAAACGAGACCAGGCCTGCTACTGgTACAGTAAAGCTTTTGAAAGTGAGCCCACCCTGCACTCAGGAATCAACAATGTGGTTCTCTTAATGGCAGCAGGCCACGACTTTGAAACCTCAATTGAGCTGCGAAAAATCGGGGTGAAGCTCAGCAGTCTTCTTGGCAGAAAGGGTAGCCTGGAGAAGATGCAGTTCTACTGGGATGTGGGGTTTTATCTAGGAGCCAGCATCCTGGCCAAGGAATCAAAAAAAGTCATTGAGTCCTCCGAAAAACTCTACAGGCTCAATGTACCAATATGGTACTTAGGATCAGTTATGGAGACATATCTCATGTTTAAGCAATTCTACAAACCCTCTGAGGAGAAGTCCCCCAAGCAGGAAATCGTGGACTTCTGGATGCAACTGTTAATGGAGGCGTGTAAACCCACAGTGTGCAACGACAGATGCCCTGTTCTCATATTAGAGCTCACTAAAGTGTTTCAGCCAGCTGTCTTGAGTGTGATTGAAGAGGAAGGCAACACGACCATAAAGCTAAAACACATTTCTCCTTCAGAAGAGaaaGGGTTGCACCACTGGACATTTCCGTCCTCCGCAATCCGAGGAGTGAGCGTTTCAAAGTTCGACGAGCGCTGCTGTTTCCTGTATGTTCTGTATAATTCGGATGATTTCCAAATCTATTTTCCAAGCGAGCTGCACTGCAAAGGGTTCTGTGACGTGGTGAACTCTCTCGTCGAGCAGAATGAAGCCAGTCTTGAAGACCCAGGGGTGCGGTCCAGTGAGGTATTGGAATTTGCATATGAATATGACGAGGCAGATCAGAGGGTAGTGCTGGGAAAGGGGACGTACGGAGTCGTGTACGCCGGCAGGGATCTCAGTAACCAAGTGCGAATTGCCATCAAGGAAATCCCAGAGAAAGACAGCACGTACTCTCAGCCGCTCCATGAGGAGATCGCCCTGCACAAGCGCCTGCAGCACAGGAACATCGTGCAGTACCTGGGCTCTGTCAGCCAGGACGGCTTCATCAAAATCTTCATGGAGGAAGTCCCTGGAGGAAGCTTGTCTTCGCTCTTGAGGTCCAAATGGGGGCCTCTGAAGGACAACGAAGCCACCATTGTTTTTTACACCAAACAGATCCTCGAAGGGCTCCGGTATCTCCACGACAACCAGATTGTTCACAGAGATATTAAGGGTGATAATGTCTTGATTAACACTTACAATGGTGTCCTGAAAATCTCAGACTTTGGGACTTCCAAGAGGCTGGCTGGAATCAACCCTTGCACAGAGACTTTTACAGGTACTCTGCAATACATGGCACCAGAGATTATTGACCAAGGCCCAAGAGGCTATGGGAAGCCAGCTGATATCTGGTCACTGGGCTGCACTATTATTGAGATGGCCACAGGGAAACCTCCCTTCCACGAGCTGGGCAGCCCTCAAGCTGCCATGTTTAAGGTGGGGATGTTTAAAATCCATCCCCAAGTCCCAGATTGCATGTCTGAAGGAGCCAAGGACTTCATACTGTGCTGTTTTGAGCCAGATCCAGACAAAAGGGCCTCCGCTGCCAAACTGCTGAAGGACTCCTTTCTCAAGACCCCCAGCCGCAGGAAGGCCAAGTCTCCCGCTGAAGCCTCGCCTTATGACCCCGGGTCACCAGGTGAATATCAGAGAAGCATGTCTGTGCCGGTGTTGGTGCGAGTGGAGGACACCTGCACCAGCGAGGAGATCGATCTGTCTTGCTCCTTGGACCTGCGGAGGACCCAGGCTGTTCGGCAGAGGAGAGAACCCACTGACAGCACACCCAGCACCAGCTTCCTCCCCGTTCCCGAGGAGCCCTTCTATGACGTCAGCAGCCCTGCCAGCCCGGACGAGAACATGGGCCTGTTCATGTTGAGGAAGGACAGTGAACGGAGGGCCACTCTGTACTGGATCCTCACTGACGACATCGACACTGTGGTCAGCAGCGTACAGGAGGGCCTGCGTCAGACTTCTAAAGGGCCGCAGTTCACAGCCGAACACGTCCATCAGCTGATCACCTGCTTGGGAGAGAACATCCACTCCCCTGACAAGAAGAAACTCAACCAGAGTCTTCTCAAGTTCAGGGCGAACCTGGTGGGAGCTGGAGTTCCCCTTGATAACCTGCAGGTGGTGCTGTTCAGCTTTCAAGATGCTGTGAAGAAGGTCCTAAAGAAGCAGAACGTGAAGCCCCATTGGATGTTCGCCCTTGACAACCTCCTGAGGCGGGCAGTGCAGGAATCCATCACTGTGCTCCTCCCAGAGCTCAAACTGCATCTGCAGTCCTCGTTTGAGTCGGAAGAGCAGGAGTTCACCACCCATGAAAGTCCTCAAGAGCACCAGGTGGAGAGGGCAGGTTCTCTCAAGGACCAGGATGTAGTTGCCACTGAAAGTCATGACGTAGAGACGTCAGGGGTGAGCACGCTCAGCTCCTGCACACTGAGTGACTTCCGCTACAATAGCTGTCACTTGGTTCAGCAGCTCAGACAGCTCCGCATGGAGACCACTCGCCTGCTGACCCAGCTCAACGAGAAGGAGATGGAGTACCAGCATCTGCTCAGGGAGTCCGTGCTGAGGAAGCAGGAGGAAATTGAGTTTCTCAAAGCCAGAGTGTCGTCGGAACCCATGGATATTTCTCCTCGTGCCTCGTGCCACCAAAAGACTGATCCTGATGATTCTGCGCTGATCCAGTGGTTACGGTCCATCCGCACTGATGAGGACACCATAGACAGATTACTTGCACATGGGTTCACTCTACAAAGCCTGGTTTACATTGCTTCAAGGGATGACTTGAAATACTCTGGGATAAGGGGCAGTAAGCTTTGTAGAATATGGGCAGCTATCAAAATGCAGAGAAAATCCCACATCAAACACCATGGACTGCCAAATGCTTCATATGAAAACACAACTCTTTGACGCATCCTTCTGGATCCATCTATCCTTCAGCACAGCAGCTGCACTCCAACTCCACACTTCAGCTTCCAAATCGGAGGGAAGTGTTTTGAAGCGCAGTCCCTCAAATGCCTGCAGATCCTTCTGGTGCAAAGCAGGGTAATTCAAGGTACTGACATGATGATTAACATGATGATCAATCAAAACAAGTTTGATTTAGTTCCATGCAGTATCCTGGTCCTATTTCAAAGGGATggtttttaaaaaagtattatgtCCTGAAAGTTgctggagaaagaaaacaacatgttCTGACTGACCTGTAAGCATCAaggttgttttaatttttgttagAAATTGATTGACAGCTATGTTTGTCCTACTGTAGCTGCTGATTCAAGATGTATTGATGGGGGAGAGAATAAGTGAGTTTACATATTTATCACTGTGGTAACTGGAAGGAAATGAAGCCTTTAAATAGAGTTTACCGTATGGAGATACTGTCATAGAAATCAATAGCCCCTCCGACTTTGACTGTAGTGCAATCCGTTTTTATGCACCGTGGTACTCTAATCAATCGGTGTTGCGTCGATTAATTGCTGAGAATCATTTCTGAGTGTAACCCACACCTTTTAAGCTAAGCAAGAGAGAATGAGAGGCGTTCCCTGCAGTCTCAGAGGGGAGGTGTCAGGTCAGAATGGAGGCAGTGGGCTGAGGTTCAACAATGATGCTACATAGAGGTAGCACCGAGTGCAAGTGGGAATACAGTAAAAGCAGGACAGTATGTGCATTAAGACTGAACTAGGAGTCTGCTTTTGGCTGCTCTGCACTTTGAGGCATTTTGCATCCAACTGTGAGCTCACGGGTCCCATTACAATAAGCGCTCTGAGTTCAGGGAAAGGGCAAAGGGAAGAGCTCCAGTTTTCCTTGGGAATTTCAGGGGCTCCTTTGGGAAGCTAGAGTTAAAATGATCTTCAGCCAACCCAGGCGtttcgcacacacacacactgtatgtataggcaactttaaaacaaatcacgCACACTAATTGCTTTCTTCCAATGCACCATGACAAGCATTTATTGGTCAACTATAAGGGGAGGGTTTGAAGCCAGGTcattctgatttgttttgttagtaGTGCTTTCAAAAGGGCCTGTGTCTTGTATCGGGCCCTGCTCAGGGGCATCTGTAGGGAAGAagggaattaaaatgtaaagcaggGTTGAAGCAGTCGTTTGCCGAGATGCTTGCCACTGGATGCTGAAAGAAATAATGTAGGCAGTGTGTATCGCCTGCGACTAATATATGTAGCAACAACGTCCTCAGTCTGGAAGTGTTCCCCATATTTATGTTTCTAATAAAACCCTGTCAGGAGACCCAATAGGCGTGACTGGGTTACATTTATGTACTGCCTTTTGCACAGATTTGTCAATTGAAACAGGCATCCAGGACTCAGGTGGTTAAGACAGCATAGGTACACATGTCTTGTAAACAGTCTTCACATGCATCCAGTATGTAAAAGTGGTACCAACTGCTGAATTTGAATGTCttgtatttctgttcttttttatcCCCTCTGtaataattacatgtattaaatcTGTTGCTCATCCTGTCAtattactgtacacacacaatgTCTGAACTATCTGACTACTAATGTGTACCagctatattttaaatttaatattttgttttgatacagaatatatattggACAAgttcttatattttattaaaaaaacaacaacaacaacatcaaaaa

Function

GO: NA

KEGG:

id description
K04426 MAP3K5, ASK1; mitogen-activated protein kinase kinase kinase 5

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00011008 True 6177 mRNA 0.50 28 7529457 7551615

Neighbor

gene id symbol gene type direction distance location
AMCG00011009 NA coding downstream 22291 7451069 ~ 7507166 (-)
AMCG00011005 NA coding downstream 120761 7392972 ~ 7408696 (-)
AMCG00011006 NA coding downstream 138891 7365242 ~ 7390566 (-)
AMCG00011003 NA coding downstream 220036 7308639 ~ 7309421 (-)
AMCG00010997 NA coding downstream 403091 7113635 ~ 7126366 (-)
AMCG00011012 fndc5b,fndc5 coding upstream 80450 7632065 ~ 7647012 (-)
AMCG00011013 NA coding upstream 181808 7733423 ~ 7742566 (-)
AMCG00011022 hdac1 coding upstream 433666 7985281 ~ 7994619 (-)
AMCG00011023 lck,LOC100136288,LOC100136287 coding upstream 445923 7997538 ~ 8026488 (-)
AMCG00011021 LOC101067225 coding upstream 479562 8031177 ~ 8037256 (-)
G103666 NA non-coding downstream 296143 7230954 ~ 7233314 (-)
G103658 NA non-coding downstream 339874 7189085 ~ 7189583 (-)
G103645 NA non-coding downstream 357652 7115984 ~ 7171805 (-)
G103556 NA non-coding downstream 767318 6755293 ~ 6762139 (-)
G103539 NA non-coding downstream 902005 6624081 ~ 6627452 (-)
G103794 NA non-coding upstream 225393 7777008 ~ 7779941 (-)
G103859 NA non-coding upstream 504866 8056481 ~ 8056683 (-)
G103893 NA non-coding upstream 616080 8167695 ~ 8167924 (-)
G103900 NA non-coding upstream 789748 8341363 ~ 8341588 (-)
G103903 NA non-coding upstream 790969 8342584 ~ 8342818 (-)
AMCG00010988 NA other downstream 884734 6628570 ~ 6644723 (-)
AMCG00010966 NA other downstream 1555150 5965133 ~ 5974307 (-)
G103395 NA other downstream 1780893 5704770 ~ 5748564 (-)
AMCG00010946 NA other downstream 2204033 5284330 ~ 5325424 (-)
AMCG00010939 NA other downstream 2388948 5134053 ~ 5140509 (-)
G103832 NA other upstream 386522 7938137 ~ 8027031 (-)
AMCG00011051 NA other upstream 1267936 8819551 ~ 8864051 (-)
AMCG00011058 srrm1,LOC107583602,LOC107721297,LOC106579139 other upstream 1670653 9222268 ~ 9236228 (-)
AMCG00011084 dlgap3,LOC106933674,LOC106958363 other upstream 2049762 9601377 ~ 9619279 (-)
AMCG00011086 NA other upstream 2189518 9741133 ~ 9743785 (-)

Expression


Co-expression Network