AMCG00011017


Basic Information

Item Value
gene id AMCG00011017
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 8066837 ~ 8068364 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00011017
ATGCATGACAACAACAAGTCGATTGCCAGTTTAAACTACAGTACCGACAGTAgacatttacagctttctttggCAGCCCATAACGCATGCCTGTGCTCTTCCTGGGCTGCAGCGGAGGTGCTGTGTCTGTGCGCTGTGGCGGCACTGTGGGGGGGCACCAACCCTTTCCTTAAGAAGGGCACAGAGGGGATTGAACGGGTGGAGAAGGGCAATATCGCCCTGCAGGTTATAGCAGAAATCAAGTTCCTCTTCCTGAACATTAAGTATTTGGTGCCATTCCTTTTCAATCAGAGTGGATCACTAGTGTATTACCTTACACTCGCCAGGACAGATTTGTCATTAGCTGTGCCTGTAACCAACTCCCTCACCTTCCTGTTCACTTTGCTGACTGGGAGGCTTCTAGGTGAAGAGATAGGTGGGAAAAACGCTGTTTTGGGAATGTGTCTCACCATGCTTGGCGTCACTCTTTGTGTAGTTAGTTCTGTCGGTGAGAGCAGCCACACTGTCGAACATTAAACCTCTAGGAATGGATGCCTGGAATAATAAGGTGACTGTTTGGATAGGTAGCTCATCGCCTCCATTGGCAAACCTGAAATACTCAGGGGCCTTCCAGACCGTGCTTGGATGCCAGTCCCATGGGGCAGCCATTTCTTATGATTTCTTGCACTGGCGACTCGGTTTCCTTTTCTACAATACAGGCCCCCTGGGCATGCAGAGAAAAATGGTTTGGAAAGCTGCTGGTTGACAATCTGAACTATGTATCATGTTTGTGAAGAGCAAGAATATACtgttcatgaaaacaaaatgtatatacactcacctaaaggattattaggaacaccatactaatactgtg

Function

GO:

id name namespace
GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00011017 True 856 mRNA 0.47 5 8066837 8068364

Neighbor

gene id symbol gene type direction distance location
AMCG00011020 NA coding upstream 7905 8054877 ~ 8058932 (+)
AMCG00011018 NA coding upstream 15551 8040821 ~ 8051286 (+)
AMCG00011019 NA coding upstream 55619 7995345 ~ 8011218 (+)
AMCG00011016 NA coding upstream 93110 7967340 ~ 7973727 (+)
AMCG00011015 NA coding upstream 288745 7769018 ~ 7778092 (+)
AMCG00011032 NA coding downstream 359342 8427706 ~ 8433383 (+)
AMCG00011033 rbbp4,LOC107568807,LOC107584269,LOC105015627,LOC107709266 coding downstream 383964 8452328 ~ 8460860 (+)
AMCG00011037 NA coding downstream 469130 8537494 ~ 8546945 (+)
AMCG00011039 NA coding downstream 490836 8559200 ~ 8567070 (+)
AMCG00011038 NA coding downstream 500349 8568713 ~ 8577634 (+)
G103823 fam167b,LOC108234384,LOC101067225,LOC105925981 non-coding upstream 32144 8032729 ~ 8034693 (+)
G103800 hdac1,LOC107562876,LOC108272688,LOC107745719,LOC107584281 non-coding upstream 78924 7985084 ~ 7987913 (+)
G103797 NA non-coding upstream 216808 7849794 ~ 7850029 (+)
G103761 NA non-coding upstream 438920 7624453 ~ 7627917 (+)
G103698 NA non-coding upstream 605684 7456761 ~ 7461153 (+)
G103873 NA non-coding downstream 22602 8090966 ~ 8101018 (+)
G103868 NA non-coding downstream 34031 8102395 ~ 8109235 (+)
G103959 NA non-coding downstream 515766 8584130 ~ 8590598 (+)
G103987 NA non-coding downstream 650584 8718948 ~ 8721777 (+)
G104004 NA non-coding downstream 777602 8845966 ~ 8857639 (+)
AMCG00010994 NA other upstream 963329 7071433 ~ 7103508 (+)
AMCG00010990 pum1 other upstream 1145906 6892397 ~ 6920931 (+)
G103542 NA other upstream 1424209 6641983 ~ 6642628 (+)
AMCG00010979 NA other upstream 1671353 6387036 ~ 6395484 (+)
AMCG00010922 NA other upstream 3424434 4634472 ~ 4642403 (+)
G103939 yars,LOC107724337,LOC107687080,LOC107709269 other downstream 479999 8548363 ~ 8552605 (+)
AMCG00011076 zbtb8b,LOC107724281,LOC107584246 other downstream 1462110 9530474 ~ 9549520 (+)
AMCG00011089 csmd2 other downstream 2135253 10203617 ~ 10271863 (+)
G104273 NA other downstream 2750324 10818688 ~ 10819423 (+)
AMCG00011110 zn706,LOC103364770,LOC104931588,LOC101168967,LOC102235987,LOC101064701,LOC103393878 other downstream 3575653 11644017 ~ 11651021 (+)

Expression


Co-expression Network