AMCG00011037


Basic Information

Item Value
gene id AMCG00011037
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 8537494 ~ 8546945 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00011037
atgtctctgtgtgctCTCTTTACCTCAGCACTGTCAAAGCCCGAGGATGACAACAAACTGACGGTGCACTTCACAGCCTCTGAGCACTTCCAGGAGAATGTGTTCATCGAGGGCAGCCGGCCTCAGTACCTGGAAGCGCTGCACACCGAGGCCCAGGAGGGGCTCAAATGTCTCCAGCAGGAAGaaaatgGGAATGGACTTGAACATGGGGACAACCAAAGTATCCATTCGACGATAACGCTGCAGCCCGAGCATGAGGCCGGCTTCAGAGGGAGAAAAGGATCACTGGAGTCGGAGAGCACCACTGCAGACACCGTCTCCACTGTGTCGGCCCGTTCCGCACTGCTGCGCACTGGCTCTACCTTCAAGCCATACAATCAGCCTAAAAAGCCAGAGAAGACCAAAAAGAGAAGCAGAAGAACCACTATAATGGGAATACCGCAGCATGTACAAAAGGAGCTAGGGATTGAGAGAGCAACCATGATAAAGCACAATGCAGATGGCACAAACTCTGTCCGGCTGGCAAATGGAGGGGATGGCTCTGTGGTCATACCAACTGTTGATGGAGAGTTGCCAAGACCTAATCATGAAGGTGCCAGGGTCCACTTGCAGGCCATCGAGTTCATGCAGTCCTCCCATGAAGAGAAGCTCCTCAAGCATCACATTAAGGCTGTTTACAAGGATGACTTTGCCCTGCACCACAAGGTGGGCCCCAGGTTCTCTCCCATGCAGAGGCCCAAGTCGCTGGCTGTACCGGGAATGACGACACACAACTACATAAACGAGCCCCAAAGCCCCGTCATGTCCATGTCACCACAGGCCACCTACTTGTCCAAGATCATCCCCAATGCCATCTTGCCAGCCTCTGTGGATGTCATCGAGATCAGCAGAAGCCGCAGCAGGAACAGCGTCCGCACTGTGAGCAAGAGCAGTCTGGTATCTGCTAGCCCGGCCTCCACACGCTCCAGCATGCGCTCGTCTGCCCGCAACTTCAACATCAGTGATCTCTCTTCCAACAGCTCCAACTGGAGCCACTCCCAGTCTTCCGAGACCATCGTGTCCAACTCCTCTACCATCTCCTCCAAGGGCAGTGCAAAGAAAGTTCAGACCCTGAATGGGGCAGGTGAGCCTGCTCCCAGGAAGACAGATAAGGAGACCAACAGGCCAGGACCTGATCAGATGAGTGTCAACAGCTCCGTCAGCTGGGCAAGCGCTTCCTCTGCAATGGCCCAGAATGGCAGCGGGCATGGCAGCAAGCAAAAGGGCAGCCCAACGTCACCATCTTCTAGCACAGAGAGTGGGGCAGATAGCTATGACACCGCAAGCATCCAAAGCGCCAGCTCTTTCAACCGGAGCATGTCTgtgatgaagatgaagaggCCACCAGCTCCCCCGAGGAGGACCTATTCCCTGCACCAGGATAAGCTTAAGCGTCGCTCCAGAGAGCTGCAGGACAGTGGCAGCGCAGAGACCAGACAAGACAATGTCAAGGTCCCCCACCAGGAAACATGGGTGGTTGGAGGAGGGAAGCGCAGTATGATTGTGGATGAGGTTTTTTCACCTGGTACGCCAGGCAGTACCCAATCAGGGAGCCCAGCCTACTCTGCAGATTATAGCTCTCCAGACGACTCCAGGTCTTCCGCAGCTGCCAGTCCACTCACTCCAGAAACGATGGCAGCCAGGGAAGCTGTTCTCAAGGAGCAACCAGGGTCAAGTGATTCTTCCCCCCAGAAACCCCCCTTCCTCGTGAACAAGTTTGAGAGGACTATGTCTCCCTCAAGCGGCTACTCCAGCCAGAGTGGTACCCCGACGCTCCCCACCAAAGAAATTCCTGTTTTCCCATCCTCACCTGGGAATAACAAAACCAAGCCAGCAAAACCTGAGAGAACGGTCTCTCGGACGTCCCCTAATGCATCTGTATCCTCTTCCGTGACCTCTCTGTCATCTGCGCCCTCCGAGCCTCTTTCTCGAGAGGCTTCAGCCAATTCCCAGCCTGCTGGGAAGTCTTTCCCTCCTGTTGCAGCTGTGAGCAACAAGGCAGCCCCTGCCCCTCCCACAGTTTTACTCAGAGAGGCATTTAACATTCCACCACCACCCAAAGTAAAAGCACCTTCTCCTCCACCCCCTGAGACATGGATGAACAAAAAACGCATCTTCGAGGTGCTATATGGCCAAAATGCCACTGCAAACAGGTTTTCAGCAGAGAAACGGGGGACTCTCTTGATGCAAAAGAATGAGACTCAAACTGCAGAGAAGCAGCAGAGTCCATTAACAGATAAAATAGAGATTCTGTCTGTAGAAAAGGGGAGTCCGTTACAAAGTAAGGAGACTGTCCAGAAAGCAGAGATTCTATTACCAAGTACAAAAGAGGTTCCGGCAGTCCAAAAGCAGGAGAGTCCAGTGGTTGCAAAGAAAGAGCCACCTCCAGTTATGAAAAAGAGCAGTCCACTGGTTCATAAGAAGGAAGATGGACCTGTACAGGAAAGCCCCCAAGTAAAGAACCAGATTTCAGTAGAAGAAAAGAAGCCAAGTCCTCGGGTAGAGAAAAAGACCATTCCACTGGCACAGAACCCTACAGCTATAGTTATTGTGCAAGCACGTACTTCACCCCCACCATCTCCTCCCCCCGCCCACCTGCCTCCCCCACCTCCTGCTAAGAAGACCTCAGATTCATCAGTTTCATCTCCCCCTCCCGAAGCATCCCAGGTGAACCCAATAGCAGAATCTGCCTGgccacccccacctcctcccctGGAGGAATCTGGACCTGTATTTGCAGTGCAGGATGAGGTAGATTTCTCCTTCCCTCTGCCACCTCCTCCTATGTCTCAGGAAACTGTCACAGAGGTGGTGAGCTCTCCTGCTGTTTCTGAGATCCTGGAGAATTCGGGGGCTTCCACAACACCTATGGCACCTGTTACAGTTATTCTGCAACATGAACAAGCAATGCCTTCTATAGCCACTGTGGCCGTGATGGCTGCATCAGCAGCAAAGAATTTGAAGGAGGAATCTGTGAAAATAGCAGAGCCTGCATCACAACCACAGCCAGAAGAAAGGgctcccccacctcccccacctcccccagctCCCCCTTTGCCAGTGGCTATTGTCAAGCCCAGTGACCCATTGGTAGTTACCACTCCCTCCTTGGATAAGTCTGCATCAGCTCAACTGTCTTCCACTCAAGCACAACCTTCCCAAGATAAGCCAGCTGAAGTTTCCTGCCCTCCAACAGCATCTGACGTCATCCCTCCTGCACCCCCATTAACTGTGGAGAAACAGGTCCCTGGGAACTTCAGAAAACAGTCAAGCCTGGCAAGTAAGGAGCCACTGTCACGGCCCAAAAGCACACCTGCTCCCAAAGAGGATGCCAACATCCCCCTGGTCACGCCTTCCCTGCTCCAGATGGTACGGTTACGATCTGTGAATGTTGCAAGTGAGCAGACTCTCACTGGTGACATCAAACCGAGCGATGAAAACGGATCCGGCCAAGAACAGAGCCCGAGCCTGAGCCCAAACCAGACTGTACCCCAGAAGCCCATCCGCAAATCCCTCTCTCTGAAGTCGCCTCCTGCCTCGGCACCCCTTCCTTCTATGAGGCTCCAAGAAGCCATTCGCTTGAAGACAGCTGCCATGTCTTCCAAGGATGGCAAGCCTGCCAGGCTCAGCTTACGGACGTCCACATCCGCCACTGCCAGCGGTGAGCTGGGAGTGCCTTCCCCCAGGTCGCCAGATGAGGGCGCCCTGCATAAATCTCCAGCCTCCACTGCCAGCTTCATCTTCTCTAAAAGCACGAAGAAGGTAGTCATCGAGACACCATCATCTCCGGAGGCTCAGACCGATCTCAAAAAGAACCTCGTGGCAGAACTGATGTCTGTGTCCAGCCCAACAAAGCCCATGACCAGTCCGCCCCCAATCAACGGGAAACCAGCAGCCATGAAGAAGCCAAGCAAGGTGCCACCACCGGTGGCCAAAAAACCACCTCACGTTGCGAGCAACCCGGCTAAGCCTTCGAGCCCAACCACAAAGACAGAGAGCTCCCTGAGTGAGCAGCACCCCTCTACTCCCACAGAAGGGGGGCAGAAAGGGACTGAGACACATGGGGAGGCTGGGAGTGTGCAACCTGCAGGCCAGCAAGCACAACCAAAGCAGGATGCAGAGTCAGCAAATGGTCCTGAAACTGATAACACCGTGACATCGTCTGcttcatgaaagaaaaatacagcatCTTTGAAGACTGACCAATCAGAAATTCAGGAATTATCTCTCAGGGACCTGgacaggtcaaaggtcaaatgaGAGTAAGAGAGAGCAAGTTGAAGATAAACAAGACTGGAGATACTCAAAGGGAGAACTCTTATGATAAGCCTTAGCCTTATAATGGCCTTCatatttatgcaaaaaaaaaatggtgttgGTCTTTAATTTCTTTACTATAATAGCTTTATtttggagattaaaaaaaataaataaagaaaacatagaAGGACTTTCTGCTTtggcaaaacattaaaaaaatgtaaaagctctAATAAGACGACCTTGGAACATGGTCACAGGTTGATTGGAGTTCACTGCTTGACTGCAATGTTAGATCGCCACCTAGTGGTCTTAATGGGTACAAACCACTGCGGCCATGTTTGGAAAGATAAAGATACCTATAAGAGTCGGCCAATACTTTCAAGTATGTAATACCTGgaagctgtatttttttataaaattaaaacatgcactaTTCCTTTTTGGAGTGTAGCtgaaaatactactactaatatccCCTTCCAcaattttttataattattcagTGATTGAAAATTCAGCGGTTTCCCCTCCCCTAAAGGTCCCAATAAAATAGCCATTCCATATGGTAAGAAAAGATTAATCAATctttaaataacacaacaaatatattAGAAAGCTGTCAATCGATTAAGCACTTTGGTAAGGTTATGATATAAGCCTGTTATTAAGCAGTTCCAAGTTTTGGGAATCTGCAAGGCAGTGTTTCAGATGAGACTACGGTCCAGTAAAGTCCATATTAGACTGACAAAATCAAATTAGCTGCTTCTTGTTGAACTCCAAGGCAGAAGTTTATGAGGCATTATTGCAGTGTTCTCATACCTAATTTACAGGATACTGGCAAACCTTCAACCCATCTCAAGCTCCAAGCCCATAACCTGCTGGTCGCTTTCTAGTGATCAAACACAAGGAAGTCTGGCAAGCAAGAAGGTGCTACTAAGAGAGGTGTTTGCTGTAAGCAATTTGGTGGGTGGGTAGAAAGTTTTAACTTAAGTCTTGATTTAGGCCATCACCTGTACCTTTCCAACAGGAAACTGcagttgtcttttttaatatatatgtctAATTTCACCTGAAATGTCCCAGTAAGCTGTTAGTGgctgggacacacacacacagaccccccAGAATACCAACTTGAATCTCCAATTCTgggggatttattttaaaaaacaaaactaaactgttCAACATTGTCGTTCACCAAACAGCACGACCAAAGGTTGATATCTATAATCTCTACCTATGGcaatcataaaaagaaaattagttCTGGGATTAACAAGTTGCTATCTAGGACTGAAAATGTTGTTTCCAGCATCCTAACACTTGAATCTCATTAAGCTGGCACTATTTCCTGTACATTTGTAAAGGCTAGTTGCTTTAATCATTGTTACTGTTCTAGCAAGGGTCAATGCTGGTGTTAAACcgggtgttttttgtttagtttttttgctgcTTTCAGAGATACAGGAGAAAAATGCAGGTACTGAGATGCCTTTCGTGTCCTGTACAGAACACTGGCAAAGCTGACGCACATTCCCAGGGAATCTGTGTTGCACATGTAGCCCGTGCTCAGACATGGCACTCCTTGTGGAAGTGTTGGCAGGACGTCAGCTGGAGTCTGTGGCAGACATTAACAGTGCTCTAGTTCCTGACAGATGCATTTGGAAAAGCATGCGTGTAACACTGGAGGCCACAACTGATTCCTATAAGACTATAGTTACAGTGCACACAAGTATGTCCTGTGTTAACATAAAAGATGCACACTCTGATGGAAAAAGTCTGAATTGGTCAAGCAAATCCGTTCATATTTTGCAAAAACAATtttgctttctatttttttttatggccaGTACCAGAGAGTTGTGTCAACCGGACATTGTTAAAGTACATGACACGGCCAACACAGGTCAATTACAAATACTTCCCTGCTTGGCTCATGAATCAATTTTACTAACTTTATGCCAGGGATGATTTGTTAAAGTCTTACTCTAATAGTGATGTGACCTTGGTTATGAACCCATCTGTGTTGCGAACTGTAGAGTAAATCGAAATGGCATATCCTGGTGTTGGGTGTTTAATTGACCAGAATGCCATTCAGATTTATCAGTAAATCAGCTGCCAAAAAGTTTGCCACATGAAACCATAGTAATGCTATCTGCCAAGAATTGCTCCAAGGGTGACAAGAAAGGTTGGGCATTGTGCTCAGTTTCATGTTCAGAACTGTTTAAGAAGAGTCCCATTGGAGCTGATGTTCCTTTTATGTAGGAAAACCCACATTTAATTTAGGCAAGGTCCCGAACAATCAATAGAATTCACTGCTGCGGATCACAGGGGGTTCCTGCTTGGTTTAACCGGATTATACACCTTTAGAGCAGTGCAGATGCCTGTACAGAGTAGAGATTACTTTTAAGATACAAATACCCTGCCCAGCACACAAGAGGTCCCGCAGTGATCTTCAAAGCAGGGTTTGTGGTGTTCACTGTAAGTATTAATTCCAAACTCACTTCTACTGTATATCCACTGCTGTGTcttagtgtatatatatatatatatatatatatatata

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00011037 True 6871 mRNA 0.48 6 8537494 8546945

Neighbor

gene id symbol gene type direction distance location
AMCG00011033 rbbp4,LOC107568807,LOC107584269,LOC105015627,LOC107709266 coding upstream 76634 8452328 ~ 8460860 (+)
AMCG00011032 NA coding upstream 104111 8427706 ~ 8433383 (+)
AMCG00011017 NA coding upstream 469130 8066837 ~ 8068364 (+)
AMCG00011020 NA coding upstream 478562 8054877 ~ 8058932 (+)
AMCG00011018 NA coding upstream 486208 8040821 ~ 8051286 (+)
AMCG00011039 NA coding downstream 12255 8559200 ~ 8567070 (+)
AMCG00011038 NA coding downstream 21768 8568713 ~ 8577634 (+)
AMCG00011043 NA coding downstream 97378 8644323 ~ 8654378 (+)
AMCG00011044 NA coding downstream 122114 8669059 ~ 8693522 (+)
AMCG00011045 hpcal4,LOC107691524,LOC107091490,LOC102228321,LOC107562761 coding downstream 257806 8804751 ~ 8806377 (+)
G103868 NA non-coding upstream 428259 8102395 ~ 8109235 (+)
G103873 NA non-coding upstream 436476 8090966 ~ 8101018 (+)
G103850 NA non-coding upstream 467799 8061279 ~ 8069695 (+)
G103823 fam167b,LOC108234384,LOC101067225,LOC105925981 non-coding upstream 502801 8032729 ~ 8034693 (+)
G103800 hdac1,LOC107562876,LOC108272688,LOC107745719,LOC107584281 non-coding upstream 549581 7985084 ~ 7987913 (+)
G103959 NA non-coding downstream 37185 8584130 ~ 8590598 (+)
G103987 NA non-coding downstream 172003 8718948 ~ 8721777 (+)
G104004 NA non-coding downstream 299021 8845966 ~ 8857639 (+)
G104042 LOC106579881 non-coding downstream 400828 8947773 ~ 8948823 (+)
G104029 syf2,LOC107679146,LOC106610898 non-coding downstream 420933 8967878 ~ 8970770 (+)
AMCG00010994 NA other upstream 1433986 7071433 ~ 7103508 (+)
AMCG00010990 pum1 other upstream 1616563 6892397 ~ 6920931 (+)
G103542 NA other upstream 1894866 6641983 ~ 6642628 (+)
AMCG00010979 NA other upstream 2142010 6387036 ~ 6395484 (+)
AMCG00010922 NA other upstream 3895091 4634472 ~ 4642403 (+)
G103939 yars,LOC107724337,LOC107687080,LOC107709269 other downstream 1418 8548363 ~ 8552605 (+)
AMCG00011076 zbtb8b,LOC107724281,LOC107584246 other downstream 983529 9530474 ~ 9549520 (+)
AMCG00011089 csmd2 other downstream 1656672 10203617 ~ 10271863 (+)
G104273 NA other downstream 2271743 10818688 ~ 10819423 (+)
AMCG00011110 zn706,LOC103364770,LOC104931588,LOC101168967,LOC102235987,LOC101064701,LOC103393878 other downstream 3097072 11644017 ~ 11651021 (+)

Expression


Co-expression Network