AMCG00011043


Basic Information

Item Value
gene id AMCG00011043
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 8644323 ~ 8654378 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00011043
CACAGCTTTCCCGAGCTGCTGCCTGAACCGCGGGCTGCTCGCACAACCCGGCCGTGCACCCCACTGTCCCGCTGCCCGGGATTAGGATCTGAGCTCGATGCAAAGATTGGGAGACAGTGTCCTATCcgagcccccccaccccgaccCCCAATAACCCCGCAGCCACCAATGCCTGGGATTAATTCAAGCGCGCCTCGGTATGAAAACTGGGAGATGGAGTACGACCGACTGGATGATGACATGATCCCCATTCACAGACGCACCtgtgtgagtgggtgtgtgAACTGCGCTGCGTTTCCACGGAGACACGCCGTGGACCGCTCTCTTCTCCATGGCAACAGCATCTTCCACGTCCCCTGCTCGGCTCTATGGGTTTCTATGGAAACCGAGCTGGTTCTACCGGCTGAAAGTGTTGCTGCTCGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00011043 True 423 mRNA 0.59 3 8644323 8654378

Neighbor

gene id symbol gene type direction distance location
AMCG00011038 NA coding upstream 66689 8568713 ~ 8577634 (+)
AMCG00011039 NA coding upstream 77253 8559200 ~ 8567070 (+)
AMCG00011037 NA coding upstream 97378 8537494 ~ 8546945 (+)
AMCG00011033 rbbp4,LOC107568807,LOC107584269,LOC105015627,LOC107709266 coding upstream 183463 8452328 ~ 8460860 (+)
AMCG00011032 NA coding upstream 210940 8427706 ~ 8433383 (+)
AMCG00011044 NA coding downstream 14681 8669059 ~ 8693522 (+)
AMCG00011045 hpcal4,LOC107691524,LOC107091490,LOC102228321,LOC107562761 coding downstream 150373 8804751 ~ 8806377 (+)
AMCG00011047 NA coding downstream 173939 8828317 ~ 8838500 (+)
AMCG00011048 NA coding downstream 280710 8935088 ~ 8938784 (+)
AMCG00011053 NA coding downstream 299828 8954206 ~ 8960198 (+)
G103959 NA non-coding upstream 53725 8584130 ~ 8590598 (+)
G103868 NA non-coding upstream 535088 8102395 ~ 8109235 (+)
G103873 NA non-coding upstream 543305 8090966 ~ 8101018 (+)
G103850 NA non-coding upstream 574628 8061279 ~ 8069695 (+)
G103823 fam167b,LOC108234384,LOC101067225,LOC105925981 non-coding upstream 609630 8032729 ~ 8034693 (+)
G103987 NA non-coding downstream 64570 8718948 ~ 8721777 (+)
G104004 NA non-coding downstream 191588 8845966 ~ 8857639 (+)
G104042 LOC106579881 non-coding downstream 293395 8947773 ~ 8948823 (+)
G104029 syf2,LOC107679146,LOC106610898 non-coding downstream 313500 8967878 ~ 8970770 (+)
G104062 NA non-coding downstream 503943 9158321 ~ 9159219 (+)
G103939 yars,LOC107724337,LOC107687080,LOC107709269 other upstream 91718 8548363 ~ 8552605 (+)
AMCG00010994 NA other upstream 1540815 7071433 ~ 7103508 (+)
AMCG00010990 pum1 other upstream 1723392 6892397 ~ 6920931 (+)
G103542 NA other upstream 2001695 6641983 ~ 6642628 (+)
AMCG00010979 NA other upstream 2248839 6387036 ~ 6395484 (+)
AMCG00011076 zbtb8b,LOC107724281,LOC107584246 other downstream 876096 9530474 ~ 9549520 (+)
AMCG00011089 csmd2 other downstream 1549239 10203617 ~ 10271863 (+)
G104273 NA other downstream 2164310 10818688 ~ 10819423 (+)
AMCG00011110 zn706,LOC103364770,LOC104931588,LOC101168967,LOC102235987,LOC101064701,LOC103393878 other downstream 2989639 11644017 ~ 11651021 (+)
G104382 NA other downstream 3011820 11666198 ~ 11671340 (+)

Expression


Co-expression Network