AMCG00011053


Basic Information

Item Value
gene id AMCG00011053
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 8954206 ~ 8960198 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00011053
agagagagagagagagagagagagagagagagagagagagagagagagagagagacacacacgcatacattgTGATTggggtttctttctttctttctttattgttgATGCTTGTTTCCCAGAATTTCATCTCATTTGAAATGGCGGTTACAAGCGACTTTTCCTGCGTCAATTCAGCGCAGACTCCTAACAAGAAAACGGATCCGACTTCGTCCCAAAACGAAGGGAATGTTCAAAAAGACCCCCACAGCAATGGGGACGCCAGCCGCACTGATGCTACATGGGATAAACTCTGGGATTGCTACGATCAAGAGAACACCCAGAATCAGGCGGATGAAGCGGGACCGACTGTGGAGCAAGGAAGGCTTGTGAAGGCCATGGTGCAGAAGTCCCCCGGAGAGAAGAGTGCCAACGAGAAGAGCCCGGCGGAGGCGATGAGCAGCTGCATGGACGACCTGCGCCTGTGCTCCCCCATGGAGAAAAACGCCGCCTCCACCACCAACAGGAAGTCTCGCTCCCGATCCCCCTCAGTCTGGTCTGGCAGCTCCCGCTCATCTTCTGCTTCTTCGGGCAGATCttgcagctccagctccagtgccagctccagctccagcagctcctATTTCAGCAGAAGCCGGTCCAGGTCCAGGTCTAGGTCTAGGTCTAGGTCCAGGTCCAGATCTTGCACCCGCTACAGAAGGTCTTATGGGCACCGGCGCCACAGCAGTTACTCGCGCTCCTTCTCCAGGAGCAGGTCCCGATCGCACCCGCGCTGCCACCGGACGAGGTCCCGCTCCCGTTGCAGGCGCCACAGGTCCCCTCGCCGCTTCAGATCCCGCTCCAGGTCCTACAGCCCCATGCCCCGGCTTTCCAGGTCCTACTTCAGGAGGTACAGGTCCAGGTCTAGGTCCAGGAGGTCGTGGTCCCGAGGCCGAAGGTACTACGGGTTTGTGGACAGGAGCCGAGGAAAGCTTTCATACGAGCGTTACGGGAGCAGAAGCCGGTCGCGGTCCCCCAGCCGGCCCAGCATCCGTCTGAGCAAGAACGACAAAAGGGAACTCCTTGAGATTGCGAAAGCCAACGCATCGAAGGCGCTCGGGGTGGACAACCTGGAACTGCCCAAAAGCGTGGAGAAGGAGCTGCTGgccccagagagagaggaacgGGTGAGCCGAGAAGGTACTGCTCTGAAGGGTCTGAATGAGCACTATAACAAGACGGATGCAGAAGAGGAGAGTCCTAACAGTGAGACATCGCCTAAAACCAGGTTCATCACATTCAGCCAAAATtag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00011053 True 1292 mRNA 0.57 6 8954206 8960198

Neighbor

gene id symbol gene type direction distance location
AMCG00011048 NA coding upstream 15422 8935088 ~ 8938784 (+)
AMCG00011047 NA coding upstream 115706 8828317 ~ 8838500 (+)
AMCG00011045 hpcal4,LOC107691524,LOC107091490,LOC102228321,LOC107562761 coding upstream 147829 8804751 ~ 8806377 (+)
AMCG00011044 NA coding upstream 260684 8669059 ~ 8693522 (+)
AMCG00011043 NA coding upstream 299828 8644323 ~ 8654378 (+)
AMCG00011056 runx3,LOC106610817 coding downstream 162199 9122397 ~ 9126585 (+)
AMCG00011055 NA coding downstream 181400 9141598 ~ 9155179 (+)
AMCG00011062 NA coding downstream 332435 9292633 ~ 9297651 (+)
AMCG00011064 NA coding downstream 366131 9326329 ~ 9344413 (+)
AMCG00011074 NA coding downstream 384333 9344531 ~ 9391101 (+)
G104042 LOC106579881 non-coding upstream 5383 8947773 ~ 8948823 (+)
G104004 NA non-coding upstream 96567 8845966 ~ 8857639 (+)
G103987 NA non-coding upstream 232429 8718948 ~ 8721777 (+)
G103959 NA non-coding upstream 363608 8584130 ~ 8590598 (+)
G103868 NA non-coding upstream 844971 8102395 ~ 8109235 (+)
G104029 syf2,LOC107679146,LOC106610898 non-coding downstream 7680 8967878 ~ 8970770 (+)
G104062 NA non-coding downstream 198123 9158321 ~ 9159219 (+)
G104079 NA non-coding downstream 262987 9223185 ~ 9226178 (+)
G104115 NA non-coding downstream 392175 9352373 ~ 9352587 (+)
G104147 NA non-coding downstream 513976 9474174 ~ 9475843 (+)
G103939 yars,LOC107724337,LOC107687080,LOC107709269 other upstream 401601 8548363 ~ 8552605 (+)
AMCG00010994 NA other upstream 1850698 7071433 ~ 7103508 (+)
AMCG00010990 pum1 other upstream 2033275 6892397 ~ 6920931 (+)
G103542 NA other upstream 2311578 6641983 ~ 6642628 (+)
AMCG00010979 NA other upstream 2558722 6387036 ~ 6395484 (+)
AMCG00011076 zbtb8b,LOC107724281,LOC107584246 other downstream 570276 9530474 ~ 9549520 (+)
AMCG00011089 csmd2 other downstream 1243419 10203617 ~ 10271863 (+)
G104273 NA other downstream 1858490 10818688 ~ 10819423 (+)
AMCG00011110 zn706,LOC103364770,LOC104931588,LOC101168967,LOC102235987,LOC101064701,LOC103393878 other downstream 2683819 11644017 ~ 11651021 (+)
G104382 NA other downstream 2706000 11666198 ~ 11671340 (+)

Expression


Co-expression Network