AMCG00011055


Basic Information

Item Value
gene id AMCG00011055
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 9141598 ~ 9155179 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00011055
GGCACAGACAGAAGATGGAAGACCAACAGAAGCCAACGCTCTTTTCTGATCGGTTGAGCGAGTTGGAGAGATTCCAGCGAGCTAGCATGAGGGTCGcTCTGTGGACTGAACAAATTGACACTCCCAGTTTacctttaaaaacatgcaagGTGGAAGATGATCTAAGATGGTCAGGAACCTCTGACCTCTTCAGCAACACCCGGCAATATGACCGGCAGTTCCCCTCACTGTCCACCCTCACAGATCCCCGCTTCTCGGACCCACGCATGCACTACCCCGGGGCCTTCACCTACTCCCCCAGCCCCTCCAGCGCAGGGATCGGGGGCATCAGCATGTCCAGCATGTCAGCATCCTCCCGCTACCACACTTACCTGCCGCCCCCCTACCCCGGCTCCCCCCAGAACCAGAATGGGCCTTTCCAGACCAACACCTCCCCCTACCACCTGTACTACGGCACTGGTTCAGGATCGTACCAGTTTTCCATGGTGACCGCCGGAGGGGAGCGCTCACCCACCAGAATGCTCCCGTCCTGCACCAGCGCCACGACAGGCAACAATCTAATGAACCCCAATCTGACGAGCCAGGGCGATGGGGTGGAGGCTGACGGTAGCCACAGTAACTCGCCGACGGCAATGACCACCCCAGGAAGGATGGATGAGTCAGTGTGGAGGCCTTAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00011055 True 677 mRNA 0.58 3 9141598 9155179

Neighbor

gene id symbol gene type direction distance location
AMCG00011056 runx3,LOC106610817 coding upstream 15013 9122397 ~ 9126585 (+)
AMCG00011053 NA coding upstream 181400 8954206 ~ 8960198 (+)
AMCG00011048 NA coding upstream 202814 8935088 ~ 8938784 (+)
AMCG00011047 NA coding upstream 303098 8828317 ~ 8838500 (+)
AMCG00011045 hpcal4,LOC107691524,LOC107091490,LOC102228321,LOC107562761 coding upstream 335221 8804751 ~ 8806377 (+)
AMCG00011062 NA coding downstream 137454 9292633 ~ 9297651 (+)
AMCG00011064 NA coding downstream 171150 9326329 ~ 9344413 (+)
AMCG00011074 NA coding downstream 189352 9344531 ~ 9391101 (+)
AMCG00011065 hpca,LOC105005722,LOC103394251,LOC101072338 coding downstream 236219 9391398 ~ 9409014 (+)
AMCG00011066 NA coding downstream 270003 9425182 ~ 9430080 (+)
G104029 syf2,LOC107679146,LOC106610898 non-coding upstream 170828 8967878 ~ 8970770 (+)
G104042 LOC106579881 non-coding upstream 192775 8947773 ~ 8948823 (+)
G104004 NA non-coding upstream 283959 8845966 ~ 8857639 (+)
G103987 NA non-coding upstream 419821 8718948 ~ 8721777 (+)
G103959 NA non-coding upstream 551000 8584130 ~ 8590598 (+)
G104062 NA non-coding downstream 3142 9158321 ~ 9159219 (+)
G104079 NA non-coding downstream 68006 9223185 ~ 9226178 (+)
G104115 NA non-coding downstream 197194 9352373 ~ 9352587 (+)
G104147 NA non-coding downstream 318995 9474174 ~ 9475843 (+)
G104150 pabpc4,LOC107721216,LOC107659242 non-coding downstream 322388 9477567 ~ 9481674 (+)
G103939 yars,LOC107724337,LOC107687080,LOC107709269 other upstream 588993 8548363 ~ 8552605 (+)
AMCG00010994 NA other upstream 2038090 7071433 ~ 7103508 (+)
AMCG00010990 pum1 other upstream 2220667 6892397 ~ 6920931 (+)
G103542 NA other upstream 2498970 6641983 ~ 6642628 (+)
AMCG00010979 NA other upstream 2746114 6387036 ~ 6395484 (+)
AMCG00011076 zbtb8b,LOC107724281,LOC107584246 other downstream 375295 9530474 ~ 9549520 (+)
AMCG00011089 csmd2 other downstream 1048438 10203617 ~ 10271863 (+)
G104273 NA other downstream 1663509 10818688 ~ 10819423 (+)
AMCG00011110 zn706,LOC103364770,LOC104931588,LOC101168967,LOC102235987,LOC101064701,LOC103393878 other downstream 2488838 11644017 ~ 11651021 (+)
G104382 NA other downstream 2511019 11666198 ~ 11671340 (+)

Expression


Co-expression Network