AMCG00011059


Basic Information

Item Value
gene id AMCG00011059
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 9239361 ~ 9249868 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00011059
TGCAGTGCTGAACAGAAGCAGCTGAACCTGAAAAACCAGTTTACATTGGAATTACGCTGTCATGGCGTTCGCAAGTCAGTCGCAGCTTCACCTTTTCTGGTTGCAGGAAGAGGATTACTGATTTGTGTTATTGTGGCTGGTTCtttcttcagtttttattgttgttttggtaTTATCTTCTTCACGCTCCTTAACTCCAGGTTGGACTATGTCTGTGTCACTCCTGAAAGAGTGTAACTGAATCAGAGAAGATCTGCCCCGAGTTCAGATGAAGGCACTAGCTCAGCTTCGGCTGGGAGAACAGACATTCCTGGAGATGACAAGCACAACAGCATCACCAGTGACAAACTCCACCACCACCAAATCCAGAGAACAAATGATCTATCAAAaaaaaCACGCACATCGCGGATACTGGGAACCACACGCCGCAAAAAGACAACGTCCTCCACAGCTCAGACCAACTTAGCCATGAGTAATTTAAGAGCGGGCACCCCGGCTCCGGCAGGCCCTTTTCCCTTTACAAGCAGCTCCATGGAGAATGGCAGACAGCTGCCCACGCCGAGcatatacaataataactaTAACGTGTTTGCCCCGGCGAACTCAAACGGGCAGCCGGCCGTTGTGACCATACATATGGCAAATGCAATGGACATCAGCTAGCATCCTGACTATACACAGCTTATATACAGTTCATTAAGACTGAAAAAACGATTGCCCTGGGGAGTTTCTTATGTTCAACCGAGGACGTAAGGACAGGAGAACAGGCAGCAGGTGTGACGAGGAGCTGGCAGAGGACGGGCACAGCTGGGGCTCTGTGACTGGCACACACGATAGCCTTGTGGTCTCCTTCTTGCAGCTCAGATTTCCGaggttctgcgcagatctgcagagtTCCACCGTTCCCATTGGCAGAGCAGCGCAGAACGAAAGCGCCTTGTGTTATAAGATTGTGCTGCCGCTCTCTGTACACAgtcagtattgtgtgtgtgtccatgtgtcgaGCTTACAGGGTATATGCTGTACATGATTTATTGAAAGAGTCGTGTAGTTGTGTTTGAAATTGCTATTTGTGTGGGTCTTTTTCCATTTCTGATATATAGCCTATAGTTCTGGCTTTTAAAAGTGATATAAAAATACTAGGAATCCATTCAGTATAAGTGTCCTTGTCACTTTGGTCGTGCTGATTTTAAACGGACCTGGTTCTCATAtctaattattaaaacaataattgtgtTACCTCCAAGAAGGTTTCACCTCATTTTTCTCTGGTTTCATGTCAATTCTATAATCCCTCATTCTGTCAATGGCGCTTTTCTTGAATtcaccttttttatttgtttttttttttttcaggtggaGTTGGGTTTCCTTTTAACAATGGCCTTCTGTGTCCTATAAAGTGCAATAAAGCACATTCAGCAGAGTTCTGCTATTATGTACTTTATTTAGCCTCTACTTTAAAAACAAGGGAGACTGTctagagaaaatatatttatttcctgataAAAGTTTTGTgacattgttaaagaaaaaagtttgaTCGATTTTGTTAACATGGCTGTGCAATATGTTATATAGTGTACCAATAACATAAGACTGAAAATGAGATATTAAAGAGAATTCCTAAGTGTAGTATATGAATATGCACTGCCAGAGTACCTTCCAGAAGGTGATTTCACATATACATGCGGGACTTGAttgtctttctttattattattcacgacacttgttaataaaatatgccAAAGCAGCTGGACACTGCTTTTTAATGAAGGTTTGATAGATGTTTGCGCTCACAGGTACAGCtttgataaatgtttaaacttgACTGAACCATCCTGAAAGGACTTATATGTCCTGAAAAACTTGACAATCTGCTTTCCTTCCCTGAAAAACCTTTATCTGCTCTTAATTGTatttggggtgggggttgtttCTGTATTATTGATATTCATGagatgtgtatatgtgtatgtatatatatatatatatatatatatatatatatatatata

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00011059 True 2019 mRNA 0.41 3 9239361 9249868

Neighbor

gene id symbol gene type direction distance location
AMCG00011057 clic4 coding downstream 38694 9187710 ~ 9200667 (-)
AMCG00011054 NA coding downstream 268589 8965817 ~ 8970772 (-)
AMCG00011052 NA coding downstream 286612 8941116 ~ 8952749 (-)
AMCG00011050 tmem57,tmem57a,LOC106610893,LOC107584286,LOC107687072 coding downstream 308763 8913441 ~ 8930598 (-)
AMCG00011049 ldlrap1,arhb,LOC106579967 coding downstream 352656 8866341 ~ 8886705 (-)
AMCG00011060 rcan3,LOC104955544 coding upstream 4265 9254133 ~ 9260814 (-)
AMCG00011061 NA coding upstream 50129 9299997 ~ 9309271 (-)
AMCG00011073 NA coding upstream 165214 9415082 ~ 9423743 (-)
AMCG00011068 NA coding upstream 180718 9430586 ~ 9434597 (-)
AMCG00011069 NA coding upstream 189119 9438987 ~ 9444334 (-)
G104055 NA non-coding downstream 273782 8965372 ~ 8965579 (-)
G104054 NA non-coding downstream 274080 8964717 ~ 8965281 (-)
G103999 NA non-coding downstream 428339 8806470 ~ 8811022 (-)
G103929 NA non-coding downstream 776699 8460930 ~ 8462662 (-)
G103903 NA non-coding downstream 896543 8342584 ~ 8342818 (-)
G104126 NA non-coding upstream 160721 9410589 ~ 9412922 (-)
G104272 NA non-coding upstream 1473722 10723590 ~ 10723956 (-)
G104278 NA non-coding upstream 1696133 10946001 ~ 10946274 (-)
G104315 NA non-coding upstream 2166322 11416190 ~ 11420103 (-)
G104319 NA non-coding upstream 2170881 11420749 ~ 11426225 (-)
AMCG00011058 srrm1,LOC107583602,LOC107721297,LOC106579139 other downstream 3133 9222268 ~ 9236228 (-)
AMCG00011051 NA other downstream 375310 8819551 ~ 8864051 (-)
G103832 NA other downstream 1212330 7938137 ~ 8027031 (-)
AMCG00010988 NA other downstream 2594638 6628570 ~ 6644723 (-)
AMCG00010966 NA other downstream 3265054 5965133 ~ 5974307 (-)
AMCG00011084 dlgap3,LOC106933674,LOC106958363 other upstream 351509 9601377 ~ 9619279 (-)
AMCG00011086 NA other upstream 491265 9741133 ~ 9743785 (-)
AMCG00011125 eef1a1l2,LOC107589444,LOC107706209,LOC107654701,LOC100136525,LOC105027913 other upstream 2709370 11959238 ~ 11971002 (-)
AMCG00011140 NA other upstream 2740961 11990829 ~ 11997786 (-)
AMCG00011135 NA other upstream 2816627 12066495 ~ 12069079 (-)

Expression


Co-expression Network