AMCG00011062


Basic Information

Item Value
gene id AMCG00011062
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 9292633 ~ 9297651 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00011062
GCTACAGGGGAACATCACAAACAAGGTGTTACCATGTCAGTCAGTTGACAGGGAGCTgtgataaaaaaacacaaaaaaaaaccccactatgtaaataaaatggtttatagGCAACGGCAGTTAAAAAAAGAGATTAGTTCATAGAGAAGACTGGATGCGGTGGCCAGAGAGTGGGGATATATTCTTATATTCAACCATGGGATGCACAACCAGCACAGAGGTCAATGCACAGCACTCACCAACAGAAGCCCCCAAGGACAATCCAGaaagaaataaaaacccCAACTCCAATGAAGACATGCAGGTGCTTACAGCTGTTGATGATGAAGAAAAGAGTGAGGAGCCTAAATCTGAAGCTGAAGTGGAGAGAATAGAagAGAACGATACATCACAGAATAACTCACACACGGAGGCAGATCCACCTGGAACAATTGACAATGCTGAGGAGAAAGAGGCATAGAACCAAACCTCTGGAAAATCTTTCTTCACTAAACAACAGGGTCAAGAGACAAGGAACAAACTATACTGTACACCGAATATAGATCATTGAATTACAAACATGTAAAGAAGTCAGCAGTAAGAGATTGTGTAATTCCTATTTCAGGTGTAAATGTCACTagaggaaaataaacagttatGGAGTAAAAACTATTTGACAAAATAgcccaattattttaaaaacaagttttccTAATAGAAGCATTAGCATTAGGCTTTGTGCCAGCAACAGTAATGGCCAAACTGGTTCAAATCCATCACCCTCTGAGTCCATCATACACAAGATAAGTGTTGAAGAACAAACCAGAACACTGATGTTATTAAACAGctaaataaaagcacatatgCAAGTATTAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00011062 True 856 mRNA 0.39 5 9292633 9297651

Neighbor

gene id symbol gene type direction distance location
AMCG00011055 NA coding upstream 137454 9141598 ~ 9155179 (+)
AMCG00011056 runx3,LOC106610817 coding upstream 166048 9122397 ~ 9126585 (+)
AMCG00011053 NA coding upstream 332435 8954206 ~ 8960198 (+)
AMCG00011048 NA coding upstream 353849 8935088 ~ 8938784 (+)
AMCG00011047 NA coding upstream 454133 8828317 ~ 8838500 (+)
AMCG00011064 NA coding downstream 28678 9326329 ~ 9344413 (+)
AMCG00011074 NA coding downstream 46880 9344531 ~ 9391101 (+)
AMCG00011065 hpca,LOC105005722,LOC103394251,LOC101072338 coding downstream 93747 9391398 ~ 9409014 (+)
AMCG00011066 NA coding downstream 127531 9425182 ~ 9430080 (+)
AMCG00011067 NA coding downstream 137558 9435209 ~ 9439791 (+)
G104079 NA non-coding upstream 66455 9223185 ~ 9226178 (+)
G104062 NA non-coding upstream 133414 9158321 ~ 9159219 (+)
G104029 syf2,LOC107679146,LOC106610898 non-coding upstream 321863 8967878 ~ 8970770 (+)
G104042 LOC106579881 non-coding upstream 343810 8947773 ~ 8948823 (+)
G104004 NA non-coding upstream 434994 8845966 ~ 8857639 (+)
G104115 NA non-coding downstream 54722 9352373 ~ 9352587 (+)
G104147 NA non-coding downstream 176523 9474174 ~ 9475843 (+)
G104150 pabpc4,LOC107721216,LOC107659242 non-coding downstream 179916 9477567 ~ 9481674 (+)
G104204 NA non-coding downstream 395493 9693144 ~ 9746864 (+)
G104221 NA non-coding downstream 575002 9872653 ~ 9872890 (+)
G103939 yars,LOC107724337,LOC107687080,LOC107709269 other upstream 740028 8548363 ~ 8552605 (+)
AMCG00010994 NA other upstream 2189125 7071433 ~ 7103508 (+)
AMCG00010990 pum1 other upstream 2371702 6892397 ~ 6920931 (+)
G103542 NA other upstream 2650005 6641983 ~ 6642628 (+)
AMCG00010979 NA other upstream 2897149 6387036 ~ 6395484 (+)
AMCG00011076 zbtb8b,LOC107724281,LOC107584246 other downstream 232823 9530474 ~ 9549520 (+)
AMCG00011089 csmd2 other downstream 905966 10203617 ~ 10271863 (+)
G104273 NA other downstream 1521037 10818688 ~ 10819423 (+)
AMCG00011110 zn706,LOC103364770,LOC104931588,LOC101168967,LOC102235987,LOC101064701,LOC103393878 other downstream 2346366 11644017 ~ 11651021 (+)
G104382 NA other downstream 2368547 11666198 ~ 11671340 (+)

Expression


Co-expression Network