AMCG00011068


Basic Information

Item Value
gene id AMCG00011068
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 9430586 ~ 9434597 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00011068
CCCAGTTCCTCACAGTTGCCAAAGACAGACCACTGATTGGATTCAGTTAAAAACTGCAGCTGTGCGTCATGTtatctttctttaattttccCCACAACCTTAATTCCCAAATTGAAGCTATAGATGTCTCCCTACGGCTTCGGTTGGTTGTTTTAGGAGAATGCATGTCATGTTGCGTTATTGCGTCCTGGTGATTTTGGTAAGCACTTGGGTTTATGCAGCGCAGGTTAGAAAACCAGTCAAAGCGGAGAGTCTATCGGGCAGGTCGGTGCCCAGTGCGCTTTCACCACGGGGGAGCAGAGGCAACACCCCCCGCAAGAGCAGCAACATGGCAAGGCGGCCGACTGTCCAACGACCGCGGTTAAGGCTGCCCGAATTTGGGAACCCAGATGACCAGCGCCCCGACGTCGCAGCGGTCAAACCCGTGCCGGTGCGCAGCCCGGCGGCTCCTCTGCCTGCCAGCGTCAAAGATCTTCTGATTCCGCAAATCGCCAGCCTTCCCAAGCGTCCCGGCGGCCCTGTCCCAGAGGTGTCCCTGACTTGTTTGGACACCAAGATGATCGTGCGGGTCAAGAGGACATTCTACGGACTCGGTGCCACGTCTGCGCAGCTGACCCTCGGCAAGGGGTGTAAGAACAACGGCATCCTGCGGGGCTCCGGAGACTTTCTCTTTAGGTACTCGCTGCAGGATTGTGGGACGCGCCGACTGTCTACCCCTGGGTACATCGTGTACAGAAACGTTATTCGCTATGTCCCAACAAAACGATGGGGTCCAGTCCGGAGGTCTCAGAGTATTGACGTGGGAGTTAAGTGCCGTTATAAAAGGTTTCATTACTCCTACAAGCTTGCTGTTCATCCAACATGGCAACCAGCAACCCTGGTGAAGACCTTGGAGGGTGAGGAGGGCCATTTTGGACTGAAGATCATGAATGATGATTGGACAGCATATGCGGTGTCCAATGTATACACCCTGGGGCAAGTGGTCAACTTCCAAGCCAGAGTGAATCGGGGAACAACAGGAGGAGAAGCAAAGCTGTACCTCAAATCTTGCTATGTGACACCATCGTACTATCCCAATTCCAAGCAGGCTTTCTCTGTGATTCAGAACTATGGTTGCATGGTGGACAGCAAGGTGAGAGGCAGTCGTTCCAAGTTTGTACCCCCCAGAACTGTCAGTACAATAAACTTCTCCATTGATGCTTTCCAGTTTAGAAAGAGGTCCTCCTATAAGGTCTATCTTCACTGCACAATGTTCATTACGAAAGATGCCATCAGTCCCACTGCCAAGGCCTGTACCTATAACCACAAAAGAATAAGGTGGGAAGAAGTAGAAGATATTGAAAGCAGGGTATGTGAATGCTGCAACTCCAAATGTACTGCTCCAGAGGCTTCACCTGTGGCTATGGACGTGCAGTCCAGTGGTCCTGTCATAGTTGATGGCAGCAGGCCAATGCAGGAGGAAGACCAGTTTCCCAACATCTCGGTCTCTGAAGATGCCCAGCTTCCTTCTGCTGAAGAGTGGAAGTCTACGAAGCATGATGAAGACTTCGGTCCTGTGTCTGAGAGCTACATGGAGATGCTTCCAAATGAGCACCAGCagcaggaggagaggagggataAGGAGGAGAAACTCTTAGAGTATGGCATCTAAAATTAAACTGGTTGCATTGAAGAACTTGATCTGTTGCCGACTTATTGCTTCTCTTTAGGATCTCTCAGGTACAGATCTTTATTCCACTGATTCAAGCAACATGTGCTCGTCTGTGATAAACTCTACAAAGTTGTCCTACAAAGCCTGACTACATATCCTAGATGTGCTGAGAATCTTGAATCCACATCATAATAAAAGTGGATGCAATCCTTTCATCCTAATTCATTGATCTTTTTCCTTGTTGATAATATAAATCTTGCCTGTCTATCCTATGATTTCTGAGCTGTACATTAATGCAGGGATATTGGTGAGTTTCCCACAAACTATACCTTTTGAACAATGGGTTTAACATTGTTTTGCTAATTAGAATATCCTTCACTCTGATAAAGTGGAAAGTAACTATTGCCATTTAGTCAACAATTGCCAAATGTATAAATCTAGTACACAAAACCATATGAAAGTATACTCCTAttcatatattacatttttaaccaggaaaaaatatttccaaCCTGTAAGGAATCTACAGGACTAGagtgaatcaataagatgtttgtCTAATGGTAATTTAATAATCTAGAGAAACCGGTGCAGGAGATCTAGAGGATCCCTTAGCTCTGTGTAGGTTCTGAGCCCAGAGCAAAAATTGGTGTGGTTATTTATAGATTAAGTGAACAAAGAAAAGCCTGtatatgggaataattaggaag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00011068 True 2361 mRNA 0.47 8 9430586 9434597

Neighbor

gene id symbol gene type direction distance location
AMCG00011073 NA coding downstream 6843 9415082 ~ 9423743 (-)
AMCG00011061 NA coding downstream 121315 9299997 ~ 9309271 (-)
AMCG00011060 rcan3,LOC104955544 coding downstream 169772 9254133 ~ 9260814 (-)
AMCG00011059 NA coding downstream 180718 9239361 ~ 9249868 (-)
AMCG00011057 clic4 coding downstream 229919 9187710 ~ 9200667 (-)
AMCG00011069 NA coding upstream 4390 9438987 ~ 9444334 (-)
AMCG00011070 NA coding upstream 21294 9455891 ~ 9460295 (-)
AMCG00011072 ppie coding upstream 34079 9468676 ~ 9473075 (-)
AMCG00011071 pabpc4,LOC107659242 coding upstream 39960 9474557 ~ 9488647 (-)
AMCG00011078 NA coding upstream 54945 9489542 ~ 9499083 (-)
G104126 NA non-coding downstream 17664 9410589 ~ 9412922 (-)
G104098 NA non-coding downstream 165099 9237791 ~ 9265487 (-)
G104055 NA non-coding downstream 465007 8965372 ~ 8965579 (-)
G104054 NA non-coding downstream 465305 8964717 ~ 8965281 (-)
G103999 NA non-coding downstream 619564 8806470 ~ 8811022 (-)
G104272 NA non-coding upstream 1288993 10723590 ~ 10723956 (-)
G104278 NA non-coding upstream 1511404 10946001 ~ 10946274 (-)
G104315 NA non-coding upstream 1981593 11416190 ~ 11420103 (-)
G104319 NA non-coding upstream 1986152 11420749 ~ 11426225 (-)
G104341 NA non-coding upstream 2076626 11511223 ~ 11593619 (-)
AMCG00011058 srrm1,LOC107583602,LOC107721297,LOC106579139 other downstream 194358 9222268 ~ 9236228 (-)
AMCG00011051 NA other downstream 566535 8819551 ~ 8864051 (-)
G103832 NA other downstream 1403555 7938137 ~ 8027031 (-)
AMCG00010988 NA other downstream 2785863 6628570 ~ 6644723 (-)
AMCG00010966 NA other downstream 3456279 5965133 ~ 5974307 (-)
AMCG00011084 dlgap3,LOC106933674,LOC106958363 other upstream 166780 9601377 ~ 9619279 (-)
AMCG00011086 NA other upstream 306536 9741133 ~ 9743785 (-)
AMCG00011125 eef1a1l2,LOC107589444,LOC107706209,LOC107654701,LOC100136525,LOC105027913 other upstream 2524641 11959238 ~ 11971002 (-)
AMCG00011140 NA other upstream 2556232 11990829 ~ 11997786 (-)
AMCG00011135 NA other upstream 2631898 12066495 ~ 12069079 (-)

Expression


Co-expression Network