AMCG00011073


Basic Information

Item Value
gene id AMCG00011073
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 9415082 ~ 9423743 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00011073
gagggaggaggacagagagagagagagagagagagagagagagagagagaaaactgtttaaaatgcaccaaattctctctttttaaaaaacaaaggcaaaatgGTCAACTTGGgtgtgtgctgtgctgacCTGGAGGATGAGAAGTCCCTGATGAAGATGGGGCTGGGCCTGGTGCTGGTGGGGCATGTCAACTTCCTGCTGGGGGGGCTGGTGCACGGGGCCGTTCTGCGGCACATGAGCCTGTACGAGCAATCCAAGACCCTGGAATATGCCGTCTCCAACATCATCGCCCTCGTCTCCGGCCTCGTGGGAGTGATCACGGGGATCTCTGCCATCGTCCTGTCCAAAAACAAGAAGAACAGGAGTTTGATGTGGGCGCTCCTGGTGCTCAGTGTAGTAAGTGGGCTGCTGTCAGTCGCCTCCATTGTGGGCCTCACTCTGTCAGTGGTGAAGGCAATCTTACACGAAGGGCAATTGCTGTTGTCTCGCTGCAACACCAGTACCCCCCTGGGCTACGATACCATCACACACGTGTGCCCATTCGACCCCACGCGCATCTATGAAACGACTGTTATCCTCTGGGTGCCTCTGATCCTCATGACAGTGGTGGCGTTAGTGTTCGCATTCCGATGCTTCCACGCTTGCCTGCTGTTCCTAGAGCTGCCCTGCAAGACCCGGAAACGCAAGGCAGGGCGGCCTCGTCGGGTGCTGCAGCACGTAGACTCCACGGACTCGCCCGCGGCTTGCGAGCAGGGGTCTATGCCCAGCCTACCCAGAAAAAAATGTCAG

Function

GO:

id name namespace
GO:0006269 DNA replication, synthesis of RNA primer biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00011073 True 790 mRNA 0.56 6 9415082 9423743

Neighbor

gene id symbol gene type direction distance location
AMCG00011061 NA coding downstream 105811 9299997 ~ 9309271 (-)
AMCG00011060 rcan3,LOC104955544 coding downstream 154268 9254133 ~ 9260814 (-)
AMCG00011059 NA coding downstream 165214 9239361 ~ 9249868 (-)
AMCG00011057 clic4 coding downstream 214415 9187710 ~ 9200667 (-)
AMCG00011054 NA coding downstream 444310 8965817 ~ 8970772 (-)
AMCG00011068 NA coding upstream 6843 9430586 ~ 9434597 (-)
AMCG00011069 NA coding upstream 15244 9438987 ~ 9444334 (-)
AMCG00011070 NA coding upstream 32148 9455891 ~ 9460295 (-)
AMCG00011072 ppie coding upstream 44933 9468676 ~ 9473075 (-)
AMCG00011071 pabpc4,LOC107659242 coding upstream 50814 9474557 ~ 9488647 (-)
G104126 NA non-coding downstream 2160 9410589 ~ 9412922 (-)
G104098 NA non-coding downstream 149595 9237791 ~ 9265487 (-)
G104055 NA non-coding downstream 449503 8965372 ~ 8965579 (-)
G104054 NA non-coding downstream 449801 8964717 ~ 8965281 (-)
G103999 NA non-coding downstream 604060 8806470 ~ 8811022 (-)
G104272 NA non-coding upstream 1299847 10723590 ~ 10723956 (-)
G104278 NA non-coding upstream 1522258 10946001 ~ 10946274 (-)
G104315 NA non-coding upstream 1992447 11416190 ~ 11420103 (-)
G104319 NA non-coding upstream 1997006 11420749 ~ 11426225 (-)
G104341 NA non-coding upstream 2087480 11511223 ~ 11593619 (-)
AMCG00011058 srrm1,LOC107583602,LOC107721297,LOC106579139 other downstream 178854 9222268 ~ 9236228 (-)
AMCG00011051 NA other downstream 551031 8819551 ~ 8864051 (-)
G103832 NA other downstream 1388051 7938137 ~ 8027031 (-)
AMCG00010988 NA other downstream 2770359 6628570 ~ 6644723 (-)
AMCG00010966 NA other downstream 3440775 5965133 ~ 5974307 (-)
AMCG00011084 dlgap3,LOC106933674,LOC106958363 other upstream 177634 9601377 ~ 9619279 (-)
AMCG00011086 NA other upstream 317390 9741133 ~ 9743785 (-)
AMCG00011125 eef1a1l2,LOC107589444,LOC107706209,LOC107654701,LOC100136525,LOC105027913 other upstream 2535495 11959238 ~ 11971002 (-)
AMCG00011140 NA other upstream 2567086 11990829 ~ 11997786 (-)
AMCG00011135 NA other upstream 2642752 12066495 ~ 12069079 (-)

Expression


Co-expression Network