AMCG00011097


Basic Information

Item Value
gene id AMCG00011097
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 11039056 ~ 11093828 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00011097
ATGTCCGTCCGCGATGCGCCGTTTAAGAAGGAAACAATGATCCTCTTAAGCGACCAAAGCCTGGACATGAAAAATGGCTCTGATAATATGTTTACATCAGTTGAACTGTCACTGCTGGTGCAGCACATGTCACCCCGAGACACAGAGGCTCGAATTTTCTCACACACGAGGGACGGTACATGGATGCCGGAGTGTGTGGAGTGCAACCATGTCGAGGTCAACATCGCGCTGCTCCTGAGCAGAACGGCGTGGATCGCATCAGACAAATGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00011097 True 270 mRNA 0.51 5 11039056 11093828

Neighbor

gene id symbol gene type direction distance location
AMCG00011094 tp4a2,ptp4a2,LOC107564493,LOC107653869,LOC107670276,LOC107710550,LOC105012508 coding upstream 387629 10640780 ~ 10651427 (+)
AMCG00011093 col8a2,LOC106570550,LOC107724334,LOC107565043 coding upstream 428174 10608957 ~ 10610882 (+)
AMCG00011095 NA coding upstream 435942 10601480 ~ 10603114 (+)
AMCG00011091 trappc3,LOC107653823,LOC107564495 coding upstream 535590 10498477 ~ 10503466 (+)
AMCG00011090 csmd2 coding upstream 846815 10139461 ~ 10192241 (+)
AMCG00011096 NA coding downstream 7 11093835 ~ 11124053 (+)
AMCG00011098 adgrb2 coding downstream 42888 11136716 ~ 11171971 (+)
AMCG00011099 adgrb2,LOC106931923,LOC107082735 coding downstream 126060 11219888 ~ 11252848 (+)
AMCG00011100 NA coding downstream 209236 11303064 ~ 11347011 (+)
AMCG00011101 NA coding downstream 258074 11351902 ~ 11369697 (+)
G104271 NA non-coding upstream 315166 10723550 ~ 10723890 (+)
G104255 NA non-coding upstream 421860 10555729 ~ 10617196 (+)
G104221 NA non-coding upstream 1166166 9872653 ~ 9872890 (+)
G104204 NA non-coding upstream 1292192 9693144 ~ 9746864 (+)
G104150 pabpc4,LOC107721216,LOC107659242 non-coding upstream 1557382 9477567 ~ 9481674 (+)
G104307 col9a2 non-coding downstream 278726 11372554 ~ 11377085 (+)
G104310 NA non-coding downstream 324838 11418666 ~ 11420066 (+)
G104326 NA non-coding downstream 439092 11532920 ~ 11593994 (+)
G104443 NA non-coding downstream 750582 11844410 ~ 11844623 (+)
G104444 NA non-coding downstream 750858 11844686 ~ 11845805 (+)
G104273 NA other upstream 219633 10818688 ~ 10819423 (+)
AMCG00011089 csmd2 other upstream 767193 10203617 ~ 10271863 (+)
AMCG00011076 zbtb8b,LOC107724281,LOC107584246 other upstream 1489536 9530474 ~ 9549520 (+)
G103939 yars,LOC107724337,LOC107687080,LOC107709269 other upstream 2486451 8548363 ~ 8552605 (+)
AMCG00010994 NA other upstream 3935548 7071433 ~ 7103508 (+)
AMCG00011110 zn706,LOC103364770,LOC104931588,LOC101168967,LOC102235987,LOC101064701,LOC103393878 other downstream 550189 11644017 ~ 11651021 (+)
G104382 NA other downstream 572370 11666198 ~ 11671340 (+)
AMCG00011115 NA other downstream 715018 11808846 ~ 11810822 (+)
G104435 NA other downstream 748301 11842129 ~ 11844089 (+)
G104550 NA other downstream 972666 12066494 ~ 12067337 (+)

Expression


Co-expression Network