Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00011105 |
| gene name | kcnq4 |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030133.1 |
| NCBI id | CM030133.1 |
| chromosome length | 32682731 |
| location | 11542988 ~ 11552978 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| symbol | description |
|---|---|
| kcnq4 | Predicted to enable calmodulin binding activity and delayed rectifier potassium channel activity. Predicted to be involved in potassium ion transmembrane transport. Predicted to act upstream of or within potassium ion transport and regulation of ion transmembrane transport. Predicted to be located in membrane. Predicted to be part of voltage-gated potassium channel complex. Predicted to be integral component of membrane. Is expressed in brain; heart; inner ear; and rhombomere 4. |
| description |
|---|
| PREDICTED: potassium voltage-gated channel subfamily KQT member 4 isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00011105 | True | 789 | mRNA | 0.61 | 5 | 11542988 | 11552978 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00011107 | NA | coding | upstream | 12259 | 11527210 ~ 11530729 (+) |
| AMCG00011109 | kcnq4 | coding | upstream | 42718 | 11499565 ~ 11500270 (+) |
| AMCG00011106 | LOC106588897 | coding | upstream | 52957 | 11472799 ~ 11490031 (+) |
| AMCG00011102 | NA | coding | upstream | 130036 | 11399849 ~ 11412952 (+) |
| AMCG00011101 | NA | coding | upstream | 173291 | 11351902 ~ 11369697 (+) |
| AMCG00011108 | NA | coding | downstream | 21562 | 11574540 ~ 11587206 (+) |
| AMCG00011111 | NA | coding | downstream | 85024 | 11638002 ~ 11642227 (+) |
| AMCG00011116 | NA | coding | downstream | 280866 | 11833844 ~ 11839029 (+) |
| AMCG00011122 | NA | coding | downstream | 390621 | 11943599 ~ 11946001 (+) |
| AMCG00011121 | eef1a1l2,LOC107589444,LOC107706209,LOC105892153,LOC105027913 | coding | downstream | 409420 | 11962398 ~ 11966995 (+) |
| G104310 | NA | non-coding | upstream | 122922 | 11418666 ~ 11420066 (+) |
| G104307 | col9a2 | non-coding | upstream | 165903 | 11372554 ~ 11377085 (+) |
| G104271 | NA | non-coding | upstream | 819098 | 10723550 ~ 10723890 (+) |
| G104255 | NA | non-coding | upstream | 925792 | 10555729 ~ 10617196 (+) |
| G104221 | NA | non-coding | upstream | 1670098 | 9872653 ~ 9872890 (+) |
| G104443 | NA | non-coding | downstream | 291432 | 11844410 ~ 11844623 (+) |
| G104444 | NA | non-coding | downstream | 291708 | 11844686 ~ 11845805 (+) |
| G104445 | NA | non-coding | downstream | 293010 | 11845988 ~ 11846253 (+) |
| G104479 | NA | non-coding | downstream | 361516 | 11914494 ~ 11917031 (+) |
| G104480 | NA | non-coding | downstream | 364710 | 11917688 ~ 11918147 (+) |
| G104273 | NA | other | upstream | 723565 | 10818688 ~ 10819423 (+) |
| AMCG00011089 | csmd2 | other | upstream | 1271125 | 10203617 ~ 10271863 (+) |
| AMCG00011076 | zbtb8b,LOC107724281,LOC107584246 | other | upstream | 1993468 | 9530474 ~ 9549520 (+) |
| G103939 | yars,LOC107724337,LOC107687080,LOC107709269 | other | upstream | 2990383 | 8548363 ~ 8552605 (+) |
| AMCG00010994 | NA | other | upstream | 4439480 | 7071433 ~ 7103508 (+) |
| AMCG00011110 | zn706,LOC103364770,LOC104931588,LOC101168967,LOC102235987,LOC101064701,LOC103393878 | other | downstream | 91039 | 11644017 ~ 11651021 (+) |
| G104382 | NA | other | downstream | 113220 | 11666198 ~ 11671340 (+) |
| AMCG00011115 | NA | other | downstream | 255868 | 11808846 ~ 11810822 (+) |
| G104435 | NA | other | downstream | 289151 | 11842129 ~ 11844089 (+) |
| G104550 | NA | other | downstream | 513516 | 12066494 ~ 12067337 (+) |
