AMCG00011108


Basic Information

Item Value
gene id AMCG00011108
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 11574540 ~ 11587206 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00011108
ATGCACACTCCAGTActgttgctgtgctgtgccCTGGGGCTCTTCCTGTTGACCGGGGAGGGTGTTGAGGGGCGCAGGGTTCGGAGCCGTCGGCAGCTGAACAACCCACTGCACCGGGGGGGCATCCGGGACCCCTATGGCTCGTACTGCCTGCAACGGGGTGGCTGCTGCGCCGGGCGAGATGACCAGTGCACCGTGCCCTACCTGGACACCATTTGCTACTGCGACTTGTTCTGCAACCGCACAGTGGCCGACTGCTGCCCTGACTTCTGGGGGTGGTACTGGCTGGCGGCCAGtacCTGTGGCAGGCAGGGTCAGTGGCAGTGTGAGCAGCATGCCTGCCTGATCGAGCCAGACATGATCCACGCCATCAACAGGGCAGACCACGGCTGGCATGCAGGTAACTATAGTCAGTTCTGGGGGATGACCCTAGAGGAGGGGCTCCGCTACAGACTGGGCACACAGCACCCGCCCCGGGCCGTCATCAACATGAACGAGATGAAGAACCTCATCTCCTGTGATACACGGAACCAGGGGGGCTGTGCAGGGGGGCGCATCGATGGGGCCTGGTGGTTCTTGCGCAGACGCGGtgtGGTGACAGAGGAGTGTTATCCGTTCTCGCCCCCCCAGTCGGGGTCAACCACCCCCTCCAGAGAAAGAAATCATGAAGGAGATCATGGAGAATGGGCCAGTGCAAGgtggggagaggagaggacgTACAGCGGCAACACACGGAAGTACTGGATTGCTGCCAACTCGTGGGGCAAGGCATGGGGCGAGGGCGGCTTCTTCAAGATCGCACGCGGGGAGAACGAGTGCGAGATCGAGACCTTTGTCATCGGGGTGTGGGGACGTGTCACCATGGAAGACAtgcaccaccaccatcaccaccacagGAAATAG

Function

GO:

id name namespace
GO:0008152 metabolic process biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00011108 True 903 mRNA 0.62 9 11574540 11587206

Neighbor

gene id symbol gene type direction distance location
AMCG00011105 kcnq4 coding upstream 21562 11542988 ~ 11552978 (+)
AMCG00011107 NA coding upstream 43811 11527210 ~ 11530729 (+)
AMCG00011109 kcnq4 coding upstream 74270 11499565 ~ 11500270 (+)
AMCG00011106 LOC106588897 coding upstream 84509 11472799 ~ 11490031 (+)
AMCG00011102 NA coding upstream 161588 11399849 ~ 11412952 (+)
AMCG00011111 NA coding downstream 50796 11638002 ~ 11642227 (+)
AMCG00011116 NA coding downstream 246638 11833844 ~ 11839029 (+)
AMCG00011122 NA coding downstream 356393 11943599 ~ 11946001 (+)
AMCG00011121 eef1a1l2,LOC107589444,LOC107706209,LOC105892153,LOC105027913 coding downstream 375192 11962398 ~ 11966995 (+)
AMCG00011120 ppt1,LOC107696568,LOC107591677,LOC107697049,LOC107706207,LOC107589449 coding downstream 399656 11986862 ~ 11988912 (+)
G104310 NA non-coding upstream 154474 11418666 ~ 11420066 (+)
G104307 col9a2 non-coding upstream 197455 11372554 ~ 11377085 (+)
G104271 NA non-coding upstream 850650 10723550 ~ 10723890 (+)
G104255 NA non-coding upstream 957344 10555729 ~ 10617196 (+)
G104221 NA non-coding upstream 1701650 9872653 ~ 9872890 (+)
G104443 NA non-coding downstream 257204 11844410 ~ 11844623 (+)
G104444 NA non-coding downstream 257480 11844686 ~ 11845805 (+)
G104445 NA non-coding downstream 258782 11845988 ~ 11846253 (+)
G104479 NA non-coding downstream 327288 11914494 ~ 11917031 (+)
G104480 NA non-coding downstream 330482 11917688 ~ 11918147 (+)
G104273 NA other upstream 755117 10818688 ~ 10819423 (+)
AMCG00011089 csmd2 other upstream 1302677 10203617 ~ 10271863 (+)
AMCG00011076 zbtb8b,LOC107724281,LOC107584246 other upstream 2025020 9530474 ~ 9549520 (+)
G103939 yars,LOC107724337,LOC107687080,LOC107709269 other upstream 3021935 8548363 ~ 8552605 (+)
AMCG00010994 NA other upstream 4471032 7071433 ~ 7103508 (+)
AMCG00011110 zn706,LOC103364770,LOC104931588,LOC101168967,LOC102235987,LOC101064701,LOC103393878 other downstream 56811 11644017 ~ 11651021 (+)
G104382 NA other downstream 78992 11666198 ~ 11671340 (+)
AMCG00011115 NA other downstream 221640 11808846 ~ 11810822 (+)
G104435 NA other downstream 254923 11842129 ~ 11844089 (+)
G104550 NA other downstream 479288 12066494 ~ 12067337 (+)

Expression


Co-expression Network