AMCG00011109 (kcnq4)


Basic Information

Item Value
gene id AMCG00011109
gene name kcnq4
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 11499565 ~ 11500270 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00011109
ATGGTAGGAAGACCATCCAACAACGGCGGCATCAGGATGCTCTCTGTGCCGCCTCCCAGCGATGACAGGCGGGTGGAGTTCGTTGCCCTCACCGCCGTCCAGACCGAGCAAAGCGAGCCGTCCACCCCGGAGCGAGGACATCCCGGCCACCGGACCGGGCTGCTGGGAACCCCGCTGCCAGCACCGCCCGGCCCCCGGCCCAAAGTTTCTGCAACCAGTAAGCGctacagaaaactacagaactgtctCTACAACGTCCTGGAGCGACCGAGAGGCTGGGCGTTCATATACCACGCTTTCATGGGAACACCTCCTGCAAGCGCTGCTCGTGAGTGA

Function

symbol description
kcnq4 Predicted to enable calmodulin binding activity and delayed rectifier potassium channel activity. Predicted to be involved in potassium ion transmembrane transport. Predicted to act upstream of or within potassium ion transport and regulation of ion transmembrane transport. Predicted to be located in membrane. Predicted to be part of voltage-gated potassium channel complex. Predicted to be integral component of membrane. Is expressed in brain; heart; inner ear; and rhombomere 4.

NR:

description
PREDICTED: potassium voltage-gated channel subfamily KQT member 4 isoform X10

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00011109 True 336 mRNA 0.63 2 11499565 11500270

Neighbor

gene id symbol gene type direction distance location
AMCG00011106 LOC106588897 coding upstream 9534 11472799 ~ 11490031 (+)
AMCG00011102 NA coding upstream 86613 11399849 ~ 11412952 (+)
AMCG00011101 NA coding upstream 129868 11351902 ~ 11369697 (+)
AMCG00011100 NA coding upstream 152554 11303064 ~ 11347011 (+)
AMCG00011099 adgrb2,LOC106931923,LOC107082735 coding upstream 246717 11219888 ~ 11252848 (+)
AMCG00011107 NA coding downstream 26940 11527210 ~ 11530729 (+)
AMCG00011105 kcnq4 coding downstream 42718 11542988 ~ 11552978 (+)
AMCG00011108 NA coding downstream 74270 11574540 ~ 11587206 (+)
AMCG00011111 NA coding downstream 137732 11638002 ~ 11642227 (+)
AMCG00011116 NA coding downstream 333574 11833844 ~ 11839029 (+)
G104310 NA non-coding upstream 79499 11418666 ~ 11420066 (+)
G104307 col9a2 non-coding upstream 122480 11372554 ~ 11377085 (+)
G104271 NA non-coding upstream 775675 10723550 ~ 10723890 (+)
G104255 NA non-coding upstream 882369 10555729 ~ 10617196 (+)
G104221 NA non-coding upstream 1626675 9872653 ~ 9872890 (+)
G104326 NA non-coding downstream 32650 11532920 ~ 11593994 (+)
G104443 NA non-coding downstream 344140 11844410 ~ 11844623 (+)
G104444 NA non-coding downstream 344416 11844686 ~ 11845805 (+)
G104445 NA non-coding downstream 345718 11845988 ~ 11846253 (+)
G104479 NA non-coding downstream 414224 11914494 ~ 11917031 (+)
G104273 NA other upstream 680142 10818688 ~ 10819423 (+)
AMCG00011089 csmd2 other upstream 1227702 10203617 ~ 10271863 (+)
AMCG00011076 zbtb8b,LOC107724281,LOC107584246 other upstream 1950045 9530474 ~ 9549520 (+)
G103939 yars,LOC107724337,LOC107687080,LOC107709269 other upstream 2946960 8548363 ~ 8552605 (+)
AMCG00010994 NA other upstream 4396057 7071433 ~ 7103508 (+)
AMCG00011110 zn706,LOC103364770,LOC104931588,LOC101168967,LOC102235987,LOC101064701,LOC103393878 other downstream 143747 11644017 ~ 11651021 (+)
G104382 NA other downstream 165928 11666198 ~ 11671340 (+)
AMCG00011115 NA other downstream 308576 11808846 ~ 11810822 (+)
G104435 NA other downstream 341859 11842129 ~ 11844089 (+)
G104550 NA other downstream 566224 12066494 ~ 12067337 (+)

Expression


Co-expression Network