AMCG00011110 (zn706,LOC103364770,LOC104931588,LOC101168967,LOC102235987,LOC101064701,LOC103393878)


Basic Information

Item Value
gene id AMCG00011110
gene name zn706,LOC103364770,LOC104931588,LOC101168967,LOC102235987,LOC101064701,LOC103393878
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 11644017 ~ 11651021 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00011110
GAGACAGCCGACGTCGCATATGAGTAACTGTTGTTTATAATGTTACTATAGATCATCTAGCCCCCACGTTTAGAGCAGAGCTAAAGCACAGCAATGTGATTGATTGTGAAGTAAGCCTGCTTTAAGACATGGGCAATGTCACTGTTAGACTTCGTACGTGTATATAACAGCAAAAACAGTCCTGTCTATCAAGTGACACGTACATGATGGGGACACACTCATAGTTTTAATATCTTCTAATCTTCTGAATTGTATAGTTGCAGTGGTAGTATGTACTTGAAATCACAAATATGGTTTAGGTTCATTCATTAATtaccttattattttataacctACATTACCATAACAACGAACGAAAAAACCTCGTCTTATATGTGAATACTGTTATTACCATAATGCCCCCTGCAAACTCCCCACATGATGTTAATATTATATTCTCCAGATGCACGTTGCTGCACTTATATTTAGggattatttaataaagcagatATAGCTATCTTAACATGAACTACAGCCTATTAAGCCTAGCTATATCACATTACTGCGTACAGGCTCGCCACGAATCGCTTCGTTTTGTGACGTCACCTTCGGCAGCTCTCGGCTGTCTCTGCGAGCAGCGAGGCATTATGGGAAATATTCACCAGAAAAGTCCGTATAGTCTCACCCACAGgaagagggagacagacagagtgagaACGAGAAAGAGATTCGCTAAGCTGTATCCCGATGAAAGGCTCTGTATGAGCGCCATGGCTCGCGGGCAGCAGAAGATTCAGTCCCAGCAGAAGAACGCCAAGAAGCAGGCGGAGAAGAAGAAGCAACAGGGGGCCGACCAAAAGACCGCAGCCAAGGCTGCACTCGTCTTCACCTGTCCTGTGTGCCGGccccctattgtaacaggaTGCAGCTGTGTTAAGCAGCAGGAGAGACCCAGATGCCGGACCCAAAGACCTTCAAGCAGCACTTCGAGAGCAAGCACCCCAAGTCTCCCATGCCCCCCGAGCTGGCGGATGTGCAAGCCTGAGCCCACAGACCCCACAAGACTTCACTGCCAGGACACTGACACAGAAGACCCGACCAAAGAGATCAGAACTTGGCGCGTCGGGTCGCCAAATGCCTTGGTACTGCGCTTCGGACCTGGGGAGGGGCgggagggtgggagggggtAG
>TU130484
CGGGTCGGTGGTGGATTTACACAAAGTGGGGTGACACTATACGGACTTTCCTGGTGAACATTTCCCACAATGCCTCACTGCTCACGAAGACAACCGACAGCCGCCGAAGTCTCACCCACAGgaagagggagacagacagagtgagaACGAGAAAGAGATTCGCTAAGGAGCGCCATGGCTCGCGGGCAGCAGAAGATTCAGTCCCAGCAGAAGAACGCCAAGAAGCAGGCGGAGAAGAAGAAGCAACAGGGGGCCGACCAAAAGACCGCAGCCAAGGCTGCACTCGTCTTCACCTGTCCTGTGTGCCGGACCCAGATGCCGGACCCAAAGACCTTCAAGCAGCACTTCGAGAGCAAGCACCCCAAGTCTCCCATGCCCCCCGAGCTGGCGGATGTGCAAGCCTGAGCCCACAGACCCCACAAGACTTCACTGCCAGGACACTGACACAGAAGACCCGACCAAAGAGATCAGAACTTGGCGCGTCGGGTCGCCAAATGCCTTGGTACTGCGCTTCGGACCTGGGGAGGGGCgggagggtgggagggggtAGTAATGTGAGCTGGGGGGGTAATAACTTGTCTCTACTGATGCTAGAGCTAGGTTGTCACCTCagactattttttattttgtcatttcctttatatttttgtctctcGAAAATGAGAGCACCATCGACAACGTTCCCTTTCAATTCTCGAACCCCGACTCTGCCAGCACCCCCCTCCTACAggcacatgcaaacacacacttccCTTTCCTGCAGCTGGCACCATCACTCCCAGCTGTAGGGTATCCTGTCTTTCTCCCCGCTcctgtcagtttgttttaagttgTCCACTAAAATGATCGATCTTTGGCAGCaggaccaattaagtaattaaaggaGTTAAAAGTGTGGGATGgctggttggtttgttttctaagaaAATGGTGTTTGCAATGGGGTTGGATGTGTGAGAGGCAGGATGCTCTGGTCCTGGACACTGGTGGTCTATTCTGGAGGGACTTCTTGAGCCCTTGATTGAAGATGCCTATTAAACCTGAAGAATTGTCTGTCTCCAGGACCGGCGCTGGGGACCCTGCTGTTCTGTACTGTAAAATATTGTCCAGGGCTGGCGGCTTACTGCAATTCCACTTTTTATTCTAACTTCCTCTCCATTAACTTAATCTAATTACTTTTGATTAATTGATGTTAATTATGTGTTGGTTGTGATTTagtgaataatacaaaacaagaatgaaaaaagcACTTGGCtaaatttaagatttttgttttttaaagtagtGGCGATGAATTGAATGATTAGACCTGGTTATGTTCATGGAGAGCTCAAGGTGGACTGAAAAGTACTGAAGTTACTGAATCCCATTCAAGGCatgtgagtgtttttttttttttttttttaactttttcctCTGCTGTCCTGTCATTTATGTTTTCCATCTAACAACTGTATAAATGTCCTCGTGTTACAGGTAATATGAGACACAAACCCAAACCACAATCCCTCACTTTctccctctgtgtgtttttgtcgtCTCTGCTGGGGCCCGTGACCTGCAAGGCCAGGTGGGGGGTGTTTCCCAGTCTGACCCAGTTCTGGTGCTATAGAGTCCAATTCATAAGATGTTAACACTGCAACTCTGAGTGGAACACAGATACTTatgctggggtggggggggggtgaggaaGGGGGTAAATGCTGgggtttttgttggtttgttttaaacaaacgAAAAGCAATACGATTATCGACCACTGACACAATCTGCTTGCTTACCTCACTGGACTAAAACTCTggctttaatttctttttttttaattagtttggaGGTTAGGGtgattgggggtgggggggtaggtAGGGAATGCAATCCTGTGTCTTTGATCCCATGTACATatcaattgcaaaacaaaaaataaaataagttccCTACCTGAGATTTTTAATGACTACTAACTTGTATGGTAATAAATGATTGAAACAAATCAAAGGAAGAGTCTGTTTTCTGACAATGTGTTGCATCACAGCCTTGAACCCAGACTGATCCTTAAAAACCACAAAACTctgcttgtatttatttatataaatacaaattgacaattgtatttatttttttaattttaattttgtaaatggaAGGCCATGTCATAAGTGTTTTATATATGGGCCTGTTGACATCTGTTTTGGAGTTTAGTGCAAATTGTAAGAAGGGAAACGGTGCCCTATGTACGATGtgtatgtgtaaaaaaataaataaaaaaaatagaccaTATTAAGTGCCGAGATAAGCAGCCTATCCCATAGACTTATTTTGAGTGATTCTTGGGATAACTGAGGATTTCTGTGTATCAaggataattgtttttttaaaatagaaatgcaagAATAGAAAGATGGGAGGGGTCTGTGCTTTGACCAAAGAGAGGGAAGTCTTGTGTCTCAGCTGAGGAAGCTCCATCCTTCTTCCGCTGCCTAGACAAGCCTCCAATCAGGCCTTACCGTCTTCTTAAGGGGACTAGGGACCGTCCCTGCACGGCCTCCTCACCCTCGACTCCAATAGACGAGTCTGGTGTCAAACTCGATGACCAAACGGCGTTCTTTTC

Function

NR:

description
PREDICTED: zinc finger protein 706 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00011110 False 1169 mRNA 0.48 6 11644142 11648963
TU130484 True 2608 lncRNA 0.45 5 11644017 11651021

Neighbor

gene id symbol gene type direction distance location
AMCG00011111 NA coding upstream 1790 11638002 ~ 11642227 (+)
AMCG00011108 NA coding upstream 56811 11574540 ~ 11587206 (+)
AMCG00011105 kcnq4 coding upstream 91039 11542988 ~ 11552978 (+)
AMCG00011107 NA coding upstream 113288 11527210 ~ 11530729 (+)
AMCG00011109 kcnq4 coding upstream 143747 11499565 ~ 11500270 (+)
AMCG00011116 NA coding downstream 182823 11833844 ~ 11839029 (+)
AMCG00011122 NA coding downstream 292578 11943599 ~ 11946001 (+)
AMCG00011121 eef1a1l2,LOC107589444,LOC107706209,LOC105892153,LOC105027913 coding downstream 311377 11962398 ~ 11966995 (+)
AMCG00011120 ppt1,LOC107696568,LOC107591677,LOC107697049,LOC107706207,LOC107589449 coding downstream 335841 11986862 ~ 11988912 (+)
AMCG00011133 NA coding downstream 383276 12034297 ~ 12038373 (+)
G104326 NA non-coding upstream 50023 11532920 ~ 11593994 (+)
G104310 NA non-coding upstream 223951 11418666 ~ 11420066 (+)
G104307 col9a2 non-coding upstream 266932 11372554 ~ 11377085 (+)
G104271 NA non-coding upstream 920127 10723550 ~ 10723890 (+)
G104255 NA non-coding upstream 1026821 10555729 ~ 10617196 (+)
G104443 NA non-coding downstream 193389 11844410 ~ 11844623 (+)
G104444 NA non-coding downstream 193665 11844686 ~ 11845805 (+)
G104445 NA non-coding downstream 194967 11845988 ~ 11846253 (+)
G104479 NA non-coding downstream 263473 11914494 ~ 11917031 (+)
G104480 NA non-coding downstream 266667 11917688 ~ 11918147 (+)
G104273 NA other upstream 824594 10818688 ~ 10819423 (+)
AMCG00011089 csmd2 other upstream 1372154 10203617 ~ 10271863 (+)
AMCG00011076 zbtb8b,LOC107724281,LOC107584246 other upstream 2094497 9530474 ~ 9549520 (+)
G103939 yars,LOC107724337,LOC107687080,LOC107709269 other upstream 3091412 8548363 ~ 8552605 (+)
AMCG00010994 NA other upstream 4540509 7071433 ~ 7103508 (+)
G104382 NA other downstream 15177 11666198 ~ 11671340 (+)
AMCG00011115 NA other downstream 157825 11808846 ~ 11810822 (+)
G104435 NA other downstream 191108 11842129 ~ 11844089 (+)
G104550 NA other downstream 415473 12066494 ~ 12067337 (+)
AMCG00011141 LOC567622,LOC108413244,LOC103367052,LOC101466533,LOC107379323 other downstream 416430 12067451 ~ 12140465 (+)

Expression


Co-expression Network