AMCG00011111


Basic Information

Item Value
gene id AMCG00011111
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 11638002 ~ 11642227 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00011111
ATGGACCAAGAGGGAGTCAATGGGACGGGGCTGGGTTCAGGTGCGGGGTTTTGGGGGGGCAGGGGTCAGGAGCCCAATGTGACAGCAGAGGTGCGGGGAGGGAGGCATGTGGACTATGAGGAGGAGATCCTGCGCTACTTGTGGAGGGATTACCTGTTCCCACGGCAGTACGATCTGGTGGTGGACATCACGGAGAGCTGGTTCTTTGGACAGACGCTGTGCAAAGTCATCCCCTACCTGCAGacagtATCGGTGTCTGTCTCAGTGCTGACTCTGAGTTTCATTGCTCTGGACCGCTGGTACGCCATCTGCCACCCACTGCTGTTCAAGAGCACCGCTCGCCGTGCCAGGCACAGCATCCTGCTCATCTGGGTGCTGTCCCTTACCATCATGGTGCCCCAGGCCATCGTCATGGAGACCAGCAGCATGATCCCCGAGCTGGCCAATCACAcgctgctgctgtctgtgtgcgACGAGCGCTGGGGCGgGGAGGTGTACCCCCGCGTGTATCACATCTGTTTCTTCATGGTGACATACCTGGCGCCCCTCTGTCTGATGTTCATCGCCTACTTCCAGATCTTCAGGAAGCTGTGGTGTCGCcagATCCCAGGCAACTCCGGCGGCACAGTGTCCAGGCAGTGGGTGCAGGGAGCGTGGCGCAGTGAGGCGGGGCCGGGGCCAGGCCTGGGGGCGGGGCTGTGGGGGGCGTCATCGCGGCGATGCACTGCCCTCAGTGCCGAAATCAAGCAGCTCAGGGCGAGGCGGAAGACTGCCAGGATGTTGCTGGTGCTAAGAGTCCTAGCCTCCGACCCCAACCCTGACTGTCAGAACCAGTACCAACCCAGCGCAGTACTGGCCCAGAGACTCACTACACCGCAGGAACAGAACTGA

Function

GO:

id name namespace
GO:0007610 behavior biological_process
GO:0004930 G protein-coupled receptor activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00011111 True 891 mRNA 0.61 6 11638002 11642227

Neighbor

gene id symbol gene type direction distance location
AMCG00011108 NA coding upstream 50796 11574540 ~ 11587206 (+)
AMCG00011105 kcnq4 coding upstream 85024 11542988 ~ 11552978 (+)
AMCG00011107 NA coding upstream 107273 11527210 ~ 11530729 (+)
AMCG00011109 kcnq4 coding upstream 137732 11499565 ~ 11500270 (+)
AMCG00011106 LOC106588897 coding upstream 147971 11472799 ~ 11490031 (+)
AMCG00011116 NA coding downstream 191617 11833844 ~ 11839029 (+)
AMCG00011122 NA coding downstream 301372 11943599 ~ 11946001 (+)
AMCG00011121 eef1a1l2,LOC107589444,LOC107706209,LOC105892153,LOC105027913 coding downstream 320171 11962398 ~ 11966995 (+)
AMCG00011120 ppt1,LOC107696568,LOC107591677,LOC107697049,LOC107706207,LOC107589449 coding downstream 344635 11986862 ~ 11988912 (+)
AMCG00011133 NA coding downstream 392070 12034297 ~ 12038373 (+)
G104326 NA non-coding upstream 44008 11532920 ~ 11593994 (+)
G104310 NA non-coding upstream 217936 11418666 ~ 11420066 (+)
G104307 col9a2 non-coding upstream 260917 11372554 ~ 11377085 (+)
G104271 NA non-coding upstream 914112 10723550 ~ 10723890 (+)
G104255 NA non-coding upstream 1020806 10555729 ~ 10617196 (+)
G104443 NA non-coding downstream 202183 11844410 ~ 11844623 (+)
G104444 NA non-coding downstream 202459 11844686 ~ 11845805 (+)
G104445 NA non-coding downstream 203761 11845988 ~ 11846253 (+)
G104479 NA non-coding downstream 272267 11914494 ~ 11917031 (+)
G104480 NA non-coding downstream 275461 11917688 ~ 11918147 (+)
G104273 NA other upstream 818579 10818688 ~ 10819423 (+)
AMCG00011089 csmd2 other upstream 1366139 10203617 ~ 10271863 (+)
AMCG00011076 zbtb8b,LOC107724281,LOC107584246 other upstream 2088482 9530474 ~ 9549520 (+)
G103939 yars,LOC107724337,LOC107687080,LOC107709269 other upstream 3085397 8548363 ~ 8552605 (+)
AMCG00010994 NA other upstream 4534494 7071433 ~ 7103508 (+)
AMCG00011110 zn706,LOC103364770,LOC104931588,LOC101168967,LOC102235987,LOC101064701,LOC103393878 other downstream 1790 11644017 ~ 11651021 (+)
G104382 NA other downstream 23971 11666198 ~ 11671340 (+)
AMCG00011115 NA other downstream 166619 11808846 ~ 11810822 (+)
G104435 NA other downstream 199902 11842129 ~ 11844089 (+)
G104550 NA other downstream 424267 12066494 ~ 12067337 (+)

Expression


Co-expression Network