AMCG00011114


Basic Information

Item Value
gene id AMCG00011114
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 11665124 ~ 11694330 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00011114
ATGGGCAAGCCCCTGAGCCGACCGGACTGCCTGCGCCAGAGCCCCCGCTGCCTGGGAaagggtgaggaggaggagggctaCATCGAGGACTGCTATGTGCCCCAGCGCTCCATCTATGACACCATGCGCATCAATGAGCAAATCGACCAGGGCGGAGCGGGCAAGTTGGGGCAGCCCTCCCGCAGCACACTGGGCTCGGCTGGGGGTGTGGCAGTGGGAGCTGGTGGGGGCGATGGCAGCACCCTGTCCAGCAATGGGACGCTGGGGGGTGTTTTCGAGGCTGCCCAGgagcccccccctccccgaaAGCTGGATGAGAGGCAGATCTTCGATGCGCTGAAGCTGACGGGTGACCCCCAGAGCAAGCCGCCGCCTCTCCtgccctccgtctcctcctcctcttcctcctgctcctctgCCACCACCTCCATcattccctcctcctcctcctccaccacgGTCTCCGTCTGCCCCGGTTTGCCAGCAGTTCCCAAGCGGCGCCAGCAGGGTGGTGACCGGAAGGACAACAACCCCCATCGCCGCTCCTGGAAGTCCTTCCTTCCGCCCTCCTACCCAGAATTCGTCGAGAGGCTGGAGCTGTCCCCGGGGGACTCTGGCGAGAAGCGCCTGTCTGGAGTTGGCATCCCCCTGTCCCCTGTCCTACCTCTGTCCCCTGTCCTGCCTCTATCTCCTGCCCTGCCCTTGCCATACCTTGTCCCCCAGCCACCCCCCGTCCCTGCTCCGTCCATCCCCCCTCGCATCCCaaacctccccctcccctctacCACCACCTCTACCTCCTCCTCtagttcctcctcctcctccccactcCGTGGGCCTGGGGGCCTGCTGCCTGCGCTGATGCAGCACCAGAAACAGAACCTCAACACCGGCCTGGGTCAGGGGCACAATCCGCCGCTGCAGGACAGACAGACCCAACAGCCCAGGCCCAGACCCAAACCCACGCCACCCCTCTTACCACCCAGCCTGGCTCaaggcagggagagggagagagagggagaaagagggaaggaggaaaggagagaggcagcagtagcagcagcaacCCCCCCAGTCTGTGTCACAGGTGCTTCTCTGTGGCAATCAGAGCAGGACGAATGTGGGGCCAAAGCCAGGGAGCAGGAGAGCAACCCCCTCTTACCTTCAGGGGATGCCTTCCCCCCCTCACCAGTGCAACGGACCAAGGCCCCCCCCGGAGCCCCCAAATCTCGCACCTGGCCCCGCAGCTTGAGGGGAGGGGCCAGCAAGCTTCCTGCCCGCCACCACAACTACCACATCCTGCCCCCGCTGCCCCCACACCTAGGGGAGGAGAGTGAGGAGGAGGCAGGAGGGCTGGGCGAGGAGGGAGAGGGCGACCTGTACCTGCTCGACCCCCCGTCACCTTTCCTGCTGGACGAAGTGGGGGGCTACAGGGGCCTGCCGCTCTCACCCTGCCTGAGCCAGGAGGGGGGCGAGGGGGGGCTACTGGGGGGGCTGCTGGGGTGGCCCCCCGCAGCCGGGGAGTTGCGGGAGAGGACGGCCTCCGAGCTGAAATTCGAGGAGGACGAGAGGAagatcctgcaggagctggaggcagaggaggaagaggaggaagaggaagcaAGGAGGGAGcaagatggagagagggagcaggaggagagggagcagagagaggaaagagggtGGGAGGCTGTGCTAAAGATGGAGAGCAAGGAGAGGCCAGCTGGGAGCAGCCTGGGAGAGCCCTGGCAATACCAGGAATTTCAGAGCTACCAGcagtgggaggaggagggggagggggaggaggaggaggaggaggaggaggagggtgagaGCTCCCTGGGCTGCTGGCCTCTACTGGCACCTCCTACAGGCTTTGGGGAGCCAGAGCTGCAGCCCCCCCATGCCAAAGCCACCCCACGCCCCCCCTCCGTGGCTGGCAGCTCAGAGCCCGGCTCAGACGACCTCTTCCTGGAGCTGGAGAGGCAGTGCCTGCAGGAGGAGGATGAGCAGGGCAAGGCTGGCACAGAACCATCAGACGGGCAACCCACAGCCAACACACAGCCTGAGCTGGGGGTCGCCACAGACACAGGCTGCTCTGCTCCCTCTGAGGCGGGCaccctgggggtggggggagcagaCAGGTGGAGTGCACCCTCTGAAGCAGATTCTAACCCcagcagagaggaggaggacagcAAGGGAAATGAGGGAGAGGAGCTGGCAAACGACAACGTCTTGGTAACGCACAGTGAAGACGTGGATACTGCGTTTGTGGTGACTGACAGTTTTGTGTACCTGGCGGTTTCTGCGCCACCACTTGCCTCCTcttccacctccacctccccaTCTCCCTCACCTGACCCTCCCTGCAGCCCGATGCCACCCTTCCCCCCAAAGCTGGACCTCGACCCCACTGAGGGAGGGGCCCTCCTGGCTTCAGACAGTTTTGTGTACCTGGCGGCTCCTGAGCGCATCACCCTGTCCCGggacaatgacaatgacaacgataacaacaacaaccaccccCACGTCGTACTGCCACACGCTCTCTCCCGCCAGGACTCCTGGGAGTGCGTGTCCGGCCCCCAGAGCGGCCGTCCAGGTGAGGTGTCCTTTGTGCTGGGCGGCTCACTTTCTGGGGATGAAAGTGACTGGGACTCCCGCTCCGATGCCCTGGAGTCGCCGTCAGAATCCGAGTCGGAATCCCCATCTCAGTCGGAATCAGAAATTCGATCCAGTTGCGACTCCAGCTCTGGCTCCAGCTCTGGGTCGGGAGGGGATTACTGGGACCATCTGGAACCAGGCTTTCTCTGGACTCTGTTCCCAGAGCTCTCGGAAGTCCGTGACCTGGACGGCACTCTGTCCGAGGTGGAAGACGGGAATGTTTTGGGAATGTTGTGCCCAGAGCATACGGATCAGGGCTACCAGCCAGAGGCGCTTGAGAGGGAGCAGGTGGAGAGTGTGCAGGGGCGTCTGCAGCAGGTGAATGCGCTGGGCCAGGGCCTGATCCAGAGCGCCGGCCAGCACAGCGACACACATGGCCTGGAGCAGCAGCTGGACAGCACCAACCTGCGCTGGAACGCCCTCAACAAGAGGGTGGCGGAGCGTGTGGCGCAGCTGCAGGAAGCCctgttgcattgtgggaagTTCCAGGATGCACTGGAGCCACTGCTCAGCTGGCTGGGTGACACTGAGGAGTTGATAGCCAATCAGAGGCCACCGTCTGCGGAGTACCGTGTCGTCAAGGCCCAGATACAGGAACAGAAGCTCTTGCAGCGGCTGCTAGAGGACCGGCGCGGCACGGTGGAGATGATCCGCGTGGAGGGCCAACGTATTGCCATTGCTGCGGAGACCGCAGACAGGGACAAGATCCGTCGGCAGCTGGACAGCCTGGGCGAGCGGTGGACAGCACTGCTGGACCAGGCACAAGCCAgGCAGTGCCAGCTGGAGCAGCTGCTGGAGCTGGCACACCAGTTCCATGAGGCGCTGGAGCCACTGGGTGAGTGGCTGGGCACAGCGGAGAAGAGGCTGAGCAGCGCAGAGCCAACCGGCACCCAGACTGCCAAGATCTCCCAGCAGATCGCCCGGCACCGGGAGGAGGTGGAATCTCGGGGGCCAGAGGTGGAGCGTATGGAGTCCCTCAGCCATTCGCTGTCCCTGCTGAGTTGCGAGGTGGACCGTGATTGGCTGAGGGAGCGGGTTGGGGCGGTGCGTGGGGGCTACGGGGAGCTCAGCGATTGGTGCAAGCGGCGAGCAGCCATACTGGAGCAGGCACTGGCCAACGCACGCCTGTTCGGCGAAGATGAGGTGGAGGTGCTGAACTGGCTGGCAGAGACGCAGCAGCGCCTCCCAGTGGTCACTGTGCCTCACTACAGGCAGGACCTCCTGCAGGAGCAGCACACCTTGCTACTGtcTCTGAATGAGGAGATCCTGAGCAGGAAGAAGACTGTGGACCAGGCAGTGAAGAATGGTCAGGAGCTGCTCAAACAGACCACAGTGCTAGACACGGTGGACGAGGTGGGTAACGCCCTGCTGGAGCTGGTGCCCTGGCGTGCCCGTGAGGGGCTGGACCGCTTGGTCGCCGATGCCAACCAGCGCTACCGCTCTGCCAGTGATGTCATTGCCCAGCGGGTGCAGCAGATCGACGCTGCCATCCAGAGGTCACAGCAGTTTGAGCAGGCTGTGGATGGAGAGCTGTGCTGGGCCGGGGAGACGCAGAGGAAGCTGGCATCGCTGGGGCCACTGGGGTTGGAGCCCGAGGTGGCTGGGGCTCAGCTGCAGGTGCAGAAGGCCTTCACCATTGACATCATCCGGCACCGGGACACTCTGGACCAGCTACTCGCCTCGCGGGCTGAAATCCTGGACAGTTGTACCCCCGAGCAGAGACAGGCACTGCAGGATAAGGTGGACTCTCTGAGTGAGCGCTATGAGGAGCTGGCCGCCCTAAGTGACCAGGGGGGTGCGCAGGTGAGCCAGCACTACGAGGAGGCTGACCGGCGCTACAGCAACATCAAGGACGAGGTCAAGCGCAGGGCGGCTGCACTGGACGAGGCCGTGTCGCAGTCCGCACAGTTCCACGATAAGATAGACCCCCTGCTGGAGACGCTGGAGGGGGCGGTGTCCCGGCTACGACAGCCCCCACAGATCCCGGCGGAGGTGGAGAAGATCCGGGAACAGCTGGCCGAGCACCGGTCCTCTGGGCTGGAGCACGACAAGCTGCTGCCTAGCGTCACGGCCCTGTGTGCCCGAGGGGAGGAGCTGGTGTCCCGCTCTCAGGGCTCAAACACTGACCCCGCCGCccaggTGGTGGAGGCCGGGGTGGCCCGTCTGCGGGCGCTGTGGTCGGAGCTACGTGGGCGAGCAGAGGAGCGAGAAGGGAAGCTGCTGGACGTGCTGGAGCTGGCCGGCCGCTTCTGGTCCGACGTGGCAGCGCTGCTCAGCACGCTGCGCGACTCTCAGGACATCGTGCGTGAGCTGGAGGACCCCAGCCTCGACCCGTCCCTCATCAAGCAGCAGATCGAGGCGGCTGAGgcCATTAAAGGGGAGACTGACGGCCTGCGTGAGGAGCTGGAGTTTGTCAGGACCTTGGGGGCTGACCTCATCTTTGCCTGCGGGGAAACGGAAAAGCCCGAGGTCAAGAAGACCATCGacgagATGAACGCCGCGTGGGAGGGTCTGAACCGGacgtggagagagagaatggagcGCCTGGAGGAGGCCATGACCGCCTCACTGCAGTACCAGGATGCACTGCAGggtATGTTTGACTATCTGGACAACGCAGTGATTAAGCTGTGTGACATGTCCACCGTGGGGACAGATCTCAGCACCGTGAAGCAGCAGATCGAGGAGCTCAAGctGTTCAAGGTGGAGGTGTACCAGCAGCAGATCGATATGGAGAAGCTCTGCCACCAAGGGGAGCTGCTGCTGAAGAAGGTGGTGGACCAGGCAGACCGAGACATGATCCAGGACCCACTCACTGAGCTCAGACACCTGTGGGAAAACCTGGGGGACAAGATCACTCACAGACAGcacaAGTTGGAGGGGGCTCTGCTGGCTCTGGGTCAGTTTCATCACGCCCTGTCCGAGCTGCAGGCCTGGCTGAGCCACACGCAGCGCACCCTGGACAGCCAGCGGCCCGTCAGCACTGACCCTAAGGCCATCGAAATTGACTTGGCCAAGCACAGCgtgctgCGGAACGATGTCCTGTCCCACCGCTCCACAGTGGAGACGGTGAACAGGGCAGGGGAGGAGCTGCTGGAGTCCAGCCCTGGGGAGGAGGCGGGCACGCTGCACAGTCAGCTGTCAACTGCCCGGCCCACAGGGGGCCTTCCCGAGACCGCCCGcgagcagctgcagcagcacatGGAGCTGCAGTCCCAGCTGGCAGGCCGATTGGAACAGCACCACCGGCTGCAGGATCAGGGTCAGGCCATGCTGCTGGCCCGTGGGGAGGAGGCCATGTCCGGCTCCAATACCCAGCAGAACTTGGCGCTGCTGGAGGCCAAGTGGACCAGCCTGAACACCAAGATGGAGGAGAGAAGGGCTAAGCTGGAGGAGGCGGTTTCCTTGGCGACGGGCTTCCAGGCATCTCTGCAGGACTGTATTAACTGGCTGACGCAGGCGGAGCAGACTgtGTTTGTGAACGAGGTGAACTCTCACAGGGAGCAAGTGCTTTACCTGGAGAAGGTGGGGGCGCAGATCCGGCTGGCCAGCCAGAAGCAGGATGTGGTTCTGATCCGAAACCTGCTGCTGAGCGAGTTCCAGAAGGCCCTGGGCTCGAAGCAGCCTGTGTACGACACCACAGTGCGCTCGGGCCGCGCCATGAGGGACAAGAGCACGCTGCCCGGGGATGGACAGAGACTAGATACCCTGCTGGGAGAAATCAGAGACAAGTGGGACACTGTGTGTGGGAAGAGTGTGGAGAgGCAGCATAAGCTGGAAGAGGCGTTGCTATTCTCGGGTCAGTTTGCGGACGCTCTGCAGGCGCTGGTGGACTGGCTATACCGTGTCGAGCCACAGCTCAGCGAGGACCAGCCGGTGCATGGGGACCTGGACCTGGTCACCAACCTGATGGATGCCCACAAGgtgtTCCAGAAGGAGCTGGGGAAGCGCACAAGCAATGTCCAGGCGCTGCGCCGGTCTGCCCGTGAACTCATGGACAGTTCCCGAGACGACACTGCGTGGGTGCGAGTGCAGATGCAGGAGCTCAGTCACCGCTGGGACACTGTGTGCGCCTTGTCCGTGTCCAAACAGACACGCCTGGaacacgcactcacacagGTGCTAACATGGGCCAAACAGCACGAGCAGAGACTGGAGTCCGCCCTGGCTGAGCTGTTGAGCAATGCTTCGCTATTGGAGGAGCTCTTGTCATGGCTGCAGTGGGCGGAGACAACCCTGGTGCAGCGCGACACAGAGCCCCTCCCCCAGAATATCGACCAGGTCAAGGGGCTAATTACAGAGCACCAGGTGTTTATGGAAGAGATGACTCAGAAACAGCCGGATGTCGATCGTGTGACAAAGACGTACAAGAGGAAGAGCACGGAGCCACCAGGCGGGCTGGCTGACAAGCCACGCACACGAGGTCCACGGGTCATCCAGCTCTCTGGCCGCTGGCAACAGGTCTGGCTGCTGGCTCTGGACCGGCAGCGCAAGCTCAACGATGCCCTTGACAGGCTGGAGGAGTTCTTCCTTGGAAACCAGtttggGGACTCTCAGCAGCTGCGTCTGGTTCGTATTCTGCGCAGCACAGTGATGGTGCGCGTGGGTGGGGGCTGGATGGCACTGGATGAGTTCCTGGTGAAAAACGACCCCTGCCGAGGTTCAAAGCTGAAGCGCCCTGCCTTCCACTCCAGCCGTGGCTCTCTGTCCGGGGAGAACGGGGCCCAGGGCACCCCCACCTCCACCAAGCCTGGCCGCATAGACTCTAAACGGACAGGTACCTCTGCCAGTGGTCCAGCGAGCCGTGCGGGCAGTCGGGCGGGAAGCCGGACGGGCAGCCGGGCCAGCAGTCGCAGAGGCAGCGATGCCTCGGACCTGGAGCAGCTTGAGACGCAGTCCGCCTGCTCCGACGCCTCCGAGCACAGCACTACGGGGGGGCGGCGGCACGGGcgATTCAATCACCACGACAACAACGACACCACCACCCAGGAGATCTGTGAATGAACGaccacaacaacaaccataACGACGACAACAAGAGCTGCAATTGCACTGCATGAGCTGAAGGCAGCGACGGGCCCAGAGGGACTCACGGACTcgaggacagacagacagactgcgGCATGAAGCCGGAGCTGCAAGACtgccctccccccaccccccacccccacccgcG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00011114 True 7843 mRNA 0.63 35 11665124 11694330

Neighbor

gene id symbol gene type direction distance location
AMCG00011112 NA coding downstream 3825 11653002 ~ 11661299 (-)
AMCG00011104 NA coding downstream 230743 11431706 ~ 11434381 (-)
AMCG00011103 NA coding downstream 269377 11369700 ~ 11395747 (-)
AMCG00011092 NA coding downstream 1185976 10459562 ~ 10479148 (-)
AMCG00011085 LOC103394203,LOC106611221,LOC107679991,LOC107081232,LOC101155527,LOC107101634,LOC103461506 coding downstream 1911634 9752696 ~ 9753490 (-)
AMCG00011113 NA coding upstream 9759 11704089 ~ 11767942 (-)
AMCG00011119 NA coding upstream 106431 11800761 ~ 11805757 (-)
AMCG00011118 NA coding upstream 144930 11839260 ~ 11853897 (-)
AMCG00011117 ak2,LOC106570014 coding upstream 160901 11855231 ~ 11860000 (-)
AMCG00011124 NA coding upstream 178274 11872604 ~ 11891098 (-)
G104376 NA non-coding downstream 8291 11649005 ~ 11656833 (-)
G104342 NA non-coding downstream 70782 11587058 ~ 11594342 (-)
G104341 NA non-coding downstream 71505 11511223 ~ 11593619 (-)
G104319 NA non-coding downstream 238899 11420749 ~ 11426225 (-)
G104315 NA non-coding downstream 245021 11416190 ~ 11420103 (-)
G104513 NA non-coding upstream 283021 11977351 ~ 11978288 (-)
G104545 NA non-coding upstream 344839 12039169 ~ 12039376 (-)
G104568 NA non-coding upstream 382398 12076728 ~ 12144122 (-)
G104591 NA non-coding upstream 441638 12135968 ~ 12142015 (-)
G104598 NA non-coding upstream 462112 12156442 ~ 12156731 (-)
AMCG00011086 NA other downstream 1921339 9741133 ~ 9743785 (-)
AMCG00011084 dlgap3,LOC106933674,LOC106958363 other downstream 2045845 9601377 ~ 9619279 (-)
AMCG00011058 srrm1,LOC107583602,LOC107721297,LOC106579139 other downstream 2428896 9222268 ~ 9236228 (-)
AMCG00011051 NA other downstream 2801073 8819551 ~ 8864051 (-)
G103832 NA other downstream 3638093 7938137 ~ 8027031 (-)
AMCG00011125 eef1a1l2,LOC107589444,LOC107706209,LOC107654701,LOC100136525,LOC105027913 other upstream 264908 11959238 ~ 11971002 (-)
AMCG00011140 NA other upstream 296499 11990829 ~ 11997786 (-)
AMCG00011135 NA other upstream 372165 12066495 ~ 12069079 (-)
G104629 LOC100194717,LOC107660902,LOC107754487,LOC107655673 other upstream 631767 12326097 ~ 12328282 (-)
AMCG00011152 kcnip1 other upstream 733663 12427993 ~ 12457327 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location