AMCG00011128


Basic Information

Item Value
gene id AMCG00011128
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 11952116 ~ 11958308 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00011128
gaTGAAAATTTGCTCATAGCTCAGTTCTGGGAACagacatgcaaacaaacatcaaCTGATTAAGTCACCACAACTGTTTGGCGCTTTCCCTGACTGGGCTGGAGAGAGAAAGGCGGTTCGACACACAGATAGAGAGAATGTCAGCACCCAGGAAAATGGAGTCCCCACGGGGCAGGCAGCGTAGGATGACGCAGCCCAGCCCAGCGTCCCAGGACTCCCCCGTCAGGAAGAGAGCAGCCAGGACCCTGCTGGAGAGAGGTGCCTCTACCCCTCCTGCCTCCCTAGAGCTCAGCCTCATTCCTGAGGTCAGTGAGCGGGCAGAGCTTGcaaaggaagaggaggagaactTCCCAGCCCCCCAGCCACCCATTGGGACTAAATTGCAGGATGGGTCTGACCCGCAGCCCTTGGACCTGGGGCCACACTGTGAGAACTGGGAGCTGACCCCTGAGCTGAGCCGCAGGGTGCGAGAGACGGCAAACAGCTTGCCCCTGCAGCGCGAGGACACACAGTCGGCCTCCAAGCTCGTCAACCACCTGTTGAGTGAACTCATGAGCTTCCTGAAGGAGAACAAGGAGCAGCCTTTCTTCCAGGAGGCAAAGAGGATGGGCAGCGGCAGCTACTATGAGCTTGTCAAGATCTCTAACCCCAACGAGTTTGACGTGATGTTGCTGCTGCCAACACCGCGGCTGCAGTGGGAGGAGCTCAAGGGGCACAACGGGCTCTTCTACCACGTCTCTGTGGAGCGGCCCACCCGCATGTCGATTCGCCACTTCCTGCTGGAGGATGGCAAAACTGTGTCGGCCACAAACATCCTACAGGAGGCACGCGACCTAGTGAAGAAGTTCATCAGGACCTACACGGGCCCTTGCCCCCATGTCCGCTGGACCATTCAGAGGAAGAAGGCCAGTTCTCCCGCATGCGGGGGACCAGGGGGGCCGATCTCCCTGGATGTGGTGCCTGCACTGGAGGTGCCTCCCTCGCAGGGCTGGCCAGAAGCCGCATTGGAGGGGATGCCGGTGCAGAACTGGCTGGGCAAGAAGGCAAGACGCAACTTCGCCAAGCAGGCTTTCTACTTCGTGCCTAAGCAACCAAGTGGCCGAGGGCTCAGCGATCATGATAAGGAGAGCTGGCGGATCTCGTTCTCACACACCGAGAAGGAGATGATCTGTAACCACGACAGCAACAAGACCTGCTGCGAGAGCTACGCTCGGAACTGCTGCCCGTCCCTCAGTCTGCCCGTGGAAGTAAAGCGCTGTCTGCGAGTGTTGAAGTTTGTGGTGGAGCGCCTGCTGCAGTGCTACCCCCAGGAGCTGGCACCGCTCTGCTCCTACCACGCCAAGACAGTCTTCCTGCACACGCTCTGTGTGCATGGCGATGATGCACAGTGGGTGCCCCGCCACCTGGCCACCCGTGTGCTGGGGCTGCTGTCCGACCTGGAGCACCATGCTCTGACCGGGTGCCTCCCCCACTTCTTCATCACCTCCTGCAACCTGTTTGCTCCCCCTGCCTTCCACCGCCGCGCCCTGGTCTTCCTTCAGGGGAAGTTGATGGAGCAGAGGAAGCTGGGGCTGCCCCTCTTGCAGCAGCCCGCCCCCCCCTCACCTCTGCCCTCTGACCCCAGCccagcccccccagcccccccagccacactcctcccctcctcctcctgcctccCTTTCTCCGTCTGCCTCGGGATGCTGAGTGCACTTCTGGCCCTCCTGTGGGCAGTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00011128 True 1733 mRNA 0.61 8 11952116 11958308

Neighbor

gene id symbol gene type direction distance location
AMCG00011131 rpl11,LOC106570028,LOC107589447,LOC107591640 coding downstream 1116 11948240 ~ 11951000 (-)
AMCG00011127 NA coding downstream 14583 11930396 ~ 11937533 (-)
AMCG00011132 NA coding downstream 22243 11927100 ~ 11929873 (-)
AMCG00011126 lypla2 coding downstream 27657 11918704 ~ 11924459 (-)
AMCG00011123 sfpq,LOC107558579,LOC107706594 coding downstream 35095 11907461 ~ 11917021 (-)
AMCG00011129 NA coding upstream 20645 11978953 ~ 11984808 (-)
AMCG00011138 NA coding upstream 45788 12004096 ~ 12008953 (-)
AMCG00011137 LOC107589451,LOC104962793 coding upstream 56845 12015153 ~ 12033399 (-)
AMCG00011139 psmb2,LOC107591978,LOC107592948,LOC107688376 coding upstream 95330 12053638 ~ 12059625 (-)
AMCG00011136 NA coding upstream 113359 12071667 ~ 12085428 (-)
G104449 NA non-coding downstream 255057 11663592 ~ 11697059 (-)
G104376 NA non-coding downstream 295283 11649005 ~ 11656833 (-)
G104342 NA non-coding downstream 357774 11587058 ~ 11594342 (-)
G104341 NA non-coding downstream 358497 11511223 ~ 11593619 (-)
G104319 NA non-coding downstream 525891 11420749 ~ 11426225 (-)
G104513 NA non-coding upstream 19043 11977351 ~ 11978288 (-)
G104545 NA non-coding upstream 80861 12039169 ~ 12039376 (-)
G104568 NA non-coding upstream 118420 12076728 ~ 12144122 (-)
G104591 NA non-coding upstream 177660 12135968 ~ 12142015 (-)
G104598 NA non-coding upstream 198134 12156442 ~ 12156731 (-)
AMCG00011086 NA other downstream 2208331 9741133 ~ 9743785 (-)
AMCG00011084 dlgap3,LOC106933674,LOC106958363 other downstream 2332837 9601377 ~ 9619279 (-)
AMCG00011058 srrm1,LOC107583602,LOC107721297,LOC106579139 other downstream 2715888 9222268 ~ 9236228 (-)
AMCG00011051 NA other downstream 3088065 8819551 ~ 8864051 (-)
G103832 NA other downstream 3925085 7938137 ~ 8027031 (-)
AMCG00011125 eef1a1l2,LOC107589444,LOC107706209,LOC107654701,LOC100136525,LOC105027913 other upstream 930 11959238 ~ 11971002 (-)
AMCG00011140 NA other upstream 32521 11990829 ~ 11997786 (-)
AMCG00011135 NA other upstream 108187 12066495 ~ 12069079 (-)
G104629 LOC100194717,LOC107660902,LOC107754487,LOC107655673 other upstream 367789 12326097 ~ 12328282 (-)
AMCG00011152 kcnip1 other upstream 469685 12427993 ~ 12457327 (-)

Expression


Co-expression Network