AMCG00011132


Basic Information

Item Value
gene id AMCG00011132
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 11927100 ~ 11929873 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00011132
ATGTCGGGACATGGACATGGCCACGGCCACGGCCACGGCTGCGGATGCCAGGCGGAGCATGAGCCGGCGGAAAGAGGAGTGGAATTCGGGCTGTACCGCCGCATCGACCTGGACAAACTGCAGTGCCTGAACGAGAGCCTGGACGGACACGGCAGGTTGGTCTTCAAGCCCTGGGAGCAGCGCAGAGACCGAGAGAAGGTGTGTATTCGAGCCCCAGGCTCTAGCGCAAGGCCGtcccgGTTCACAGGCAGTGTGAAGTTGAAGGGTGTGATTATCTCCGGGGAAGACGATGACTCGCACCCCTCTGAGATGCGACTGTATAAGAACATGCCACACATGTCCTTTGATGACACAGGCCGAGAGCCAGAGCAGGTCTTCCGGCTGAACAGAGACACGACAGCAGAGCTGGAGTACCCCACCAAGATCACTCGTTTTTCCAATGTTGAGCATCTCTCTATCCATCTCTCACGAAACTTTGGGGCAGACTCCACCCGTGTCTACTACATCGGCCTGCGGGGAGAGTACTCTGAGgCTCACAGACACGAAGTGACCATCTGCACATATGAGGCTTCGGCTAACCCAGCCGACCATAGAGTGGAGACGATGACCCCGCAGACGCACTTCATCTCCTGATAGATTAAGGGTGGGAGTGGGAAAAGTGGGGTCTTGGGAAACGAGAGAGATTTGATTTGGTGccactgcagacagacagggtagAGTGtgtacagacacagacagacgggcagaggcagagagagacagaccgaGACTGGAAGTGCAGCTAGCACCGAGGGAGGCGTTATCTAACTGGTCACAGACCCATTTTACTCTGGGGAAACGAGCCCAATTGGTCCCGTGGCGGTCGTTGCtgagctgctgtctgtgtgttactgtggAGAATAAACCCGTGACCTCGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00011132 True 917 mRNA 0.56 5 11927100 11929873

Neighbor

gene id symbol gene type direction distance location
AMCG00011126 lypla2 coding downstream 2641 11918704 ~ 11924459 (-)
AMCG00011123 sfpq,LOC107558579,LOC107706594 coding downstream 10079 11907461 ~ 11917021 (-)
AMCG00011130 NA coding downstream 27852 11891687 ~ 11899248 (-)
AMCG00011124 NA coding downstream 36002 11872604 ~ 11891098 (-)
AMCG00011117 ak2,LOC106570014 coding downstream 67100 11855231 ~ 11860000 (-)
AMCG00011127 NA coding upstream 523 11930396 ~ 11937533 (-)
AMCG00011131 rpl11,LOC106570028,LOC107589447,LOC107591640 coding upstream 18367 11948240 ~ 11951000 (-)
AMCG00011128 NA coding upstream 22243 11952116 ~ 11958308 (-)
AMCG00011129 NA coding upstream 49080 11978953 ~ 11984808 (-)
AMCG00011138 NA coding upstream 74223 12004096 ~ 12008953 (-)
G104449 NA non-coding downstream 230041 11663592 ~ 11697059 (-)
G104376 NA non-coding downstream 270267 11649005 ~ 11656833 (-)
G104342 NA non-coding downstream 332758 11587058 ~ 11594342 (-)
G104341 NA non-coding downstream 333481 11511223 ~ 11593619 (-)
G104319 NA non-coding downstream 500875 11420749 ~ 11426225 (-)
G104513 NA non-coding upstream 47478 11977351 ~ 11978288 (-)
G104545 NA non-coding upstream 109296 12039169 ~ 12039376 (-)
G104568 NA non-coding upstream 146855 12076728 ~ 12144122 (-)
G104591 NA non-coding upstream 206095 12135968 ~ 12142015 (-)
G104598 NA non-coding upstream 226569 12156442 ~ 12156731 (-)
AMCG00011086 NA other downstream 2183315 9741133 ~ 9743785 (-)
AMCG00011084 dlgap3,LOC106933674,LOC106958363 other downstream 2307821 9601377 ~ 9619279 (-)
AMCG00011058 srrm1,LOC107583602,LOC107721297,LOC106579139 other downstream 2690872 9222268 ~ 9236228 (-)
AMCG00011051 NA other downstream 3063049 8819551 ~ 8864051 (-)
G103832 NA other downstream 3900069 7938137 ~ 8027031 (-)
AMCG00011125 eef1a1l2,LOC107589444,LOC107706209,LOC107654701,LOC100136525,LOC105027913 other upstream 29365 11959238 ~ 11971002 (-)
AMCG00011140 NA other upstream 60956 11990829 ~ 11997786 (-)
AMCG00011135 NA other upstream 136622 12066495 ~ 12069079 (-)
G104629 LOC100194717,LOC107660902,LOC107754487,LOC107655673 other upstream 396224 12326097 ~ 12328282 (-)
AMCG00011152 kcnip1 other upstream 498120 12427993 ~ 12457327 (-)

Expression


Co-expression Network