AMCG00011133


Basic Information

Item Value
gene id AMCG00011133
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 12034297 ~ 12038373 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00011133
CGACCCCACATGCTGTACTAGCCTCCATGTGATTGGCCTATTGAGCGTCGGGGAGGGCGATTTGCCAAGTGTAGGAACGTAGCTTGTGCGGAAAACAGATCCATGTGTGTGACAGAGGGAGTCTGAAccagGGCTGCAGTGATGATGTCAGATGGGAAGAGTTCCCCCAGGAGTGTGGGTGATGAGGCACCCCTCCCCAGCGTGCCCCCTGAGGAGGGAGCAGATGGAGTGGACAGTGGAGCTGGAGCGGGAGCgggagcgggagagggagagggtgccGGGCTGTCAGAGGCCCAGCGAGTGCTGTTGGAGCGCTGTCTGCAAATGCTCAGTAACGCCCCAGATGACAACCAATCACTGGCCTGCCTGCTACTGatTACCCGGTTCTGTCCGGCGGCTCAGTTGGGCCGTTCCACTCTGCGCAGGGTGTTTGAGGCCGTGGGGTTCTCCCTGCCGACACGGCTGCTGGTCTCCGCAGCGAAGGGGGATGGGGGTTGCCCCCCTGAGGTGCTGCTTGGTCTGGCGGTGTCACTGCTGGCTGGGTTCAGTTCTGACCCGGAGCTCGTCACCCATCCCCAGCTCCTCAAGACAGTACCGCTCCTGCTGGACCTGGTCTCACAGCAGCAGGACCTGCACTGTCAGAATCCAGACAGGCAGCCCCAGGCCAAACAGGGCCCAGAGTCAGCAGGACAAGACCACGATGGGTCAGAACCACAACCAGAGGAAAGGCTTGAGCAAGCTTTGCCACTTAGCCCTGGTGTGCCGGGTCACAaccaggagagaggagaggagcctgctgaaacagacacagcagATCAGAACTGTCCGACCCCTAATGATCCTGGAGGGCCTCTGGTTCAGGACTGCTATGAGGTGCTGTGGGGGGTGTGTGGGTCGGCCCATGGGCCAGCACTGCTTCTGTCTCGTGAGGCAGTACCGGCACTGTGTCGGGCCTACTGTCAGAGCCAGGCCCTAAGCAGGGAACGTGGACTTCCTCTGCTGGCCCAGCTGATGTCCGGCCCGACCCGCAAGCGTGCCTGGGAGAGACATGCAGCGCAACTGACTGCCCTGCTCGACCGCCTGACCACAGAGTTCTGCCAGGCCCCTGAACAGGACCGCCTGCAGCTGTGCACCCACCTGCCAGCCTTCTTGCCCCCAGTGGGGGGTAGCATGGAGGTAGGGGCCAACATGGTGGCACTGTGGGGAGGGCTGCGCCCCCTGCTCCAGGCTCGGCTCAGCCCGGCCCAGCTGGGTCTGGTACTGGTTCTGGCTGCCTGCCTGCTGGACCTGGCAGGCTGGGCACCACTGGGCTCGGCACGGCTGGGCTGTCTGCTGGTGAACCGGGCCTGTGTGGAGGTCAGGATGGGCCTGGAGGAGCCTCCTGGTGCTGTTGTCACTGAGATGCAGCAGCATATTCTCACAGCCTGCTACCGGATCCTGGAGGCCGCTCTGGAACAGGCCTGTAGCCTGGGGCTCGCTAAGGACTCTTCCCAGTCGGGGAGCCCTGACACCCAGATTAGCCTGCAGCAGGGCAAGCAGTTGGTGGGAGTTCTGCAGGAGGCCTTCTCTGCTACTATCTACTACCTAcagcagGTAACACCGAGTCGCTATGGTGACCCCTTTGTGTTCGTCACATTCCGTGCCCTCTGCGCCTGGCTGGCTGAGGAGACTTCCTGTCTAAGGCAGGAAGTGACCACCCTGCTGCCCTTCCTGATTGGCTACGCCAAGGCCCATCTGGAGGAAGACAGGCGAGACCAGGGCCTGGCCAACTGGATGGCAGAGATGTCTGTGGGTGACAGTGCAGAGGACGGGGCCTGGTCAGGGGAGGAGCCTCTGAGACTGCTCCTCCCTGCACTGTGTCACCTGACAGCGGAGGAGGGGCCGCGGGGTGTTCTGTTGTCTCTGGGGACACCAGCCCTGCTGACACACTTCCTGTCTCTGCGCTGGGGAGCTGGGGGGCGGCAGGAGGGATCTGGGGACCCCAGCATGGAGACGGCCTGCTCTGCCCTGCTCAATATCACtgtcactgagaaacacacCGTCAGgacagACCCCTCGTTCACGTCTCTCCAGTCCCTGCTGGTTGACGCAGTCCCTGCCCTTCTGCACAAGCCTCGCCTCCTCATGCTGGCTGTAAACTTCTGCACGCTGGGGCTTCTGATTACCCGGCTGAGGCCCACCCCACCTGgTGTTCGTGGGGAGGTGCGAGTGAGGCGGTTCATTGGCTCTTCCCTGCAGTTTCTCTTGGGGGCACTTTGCCCTGGGGGTGTGAGCACGGAGTGGGCAGTGCTGTGGGCAGAGGGGGCGGCGGAGCTGTGGCGGCTCAGTCTCCAGGCGCTGGCGGGCAGCATTGCCGCATTGCCGTGGTTACCTGACATGGCGCGAGACGGGGGCTGGCTGCGGGACATGCTGGAGCTGCTGACCGGCTGCGCTGCGCTGCCCGATTCCGACACACTGGAGGCGCTGCAGGAATTCCTCACTGTGCTGGCACAACACTGTCCCCACTGCAGGCACGATATCGCACAACACTGGGGTGGAGCCCTAAGCACCATGACACAGTTGCACACGGCCCTGCAGCACTGACGCACTGTGACATACTGGAACACTGAATGCCATACAGTCTGTAGACCCCTAGTCAGTATTTTTCTATGATGATTATCGAGAGACTGGAATCTGTTTATCTCTCTGTGCTTTTTATACCAATAAAGAACCAACACACTGC

Function

GO:

id name namespace
GO:0061982 meiosis I cell cycle process biological_process
GO:0006950 response to stress biological_process
GO:0051321 meiotic cell cycle biological_process
GO:1903046 meiotic cell cycle process biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00011133 True 2722 mRNA 0.62 7 12034297 12038373

Neighbor

gene id symbol gene type direction distance location
AMCG00011120 ppt1,LOC107696568,LOC107591677,LOC107697049,LOC107706207,LOC107589449 coding upstream 45385 11986862 ~ 11988912 (+)
AMCG00011121 eef1a1l2,LOC107589444,LOC107706209,LOC105892153,LOC105027913 coding upstream 67302 11962398 ~ 11966995 (+)
AMCG00011122 NA coding upstream 88296 11943599 ~ 11946001 (+)
AMCG00011116 NA coding upstream 195268 11833844 ~ 11839029 (+)
AMCG00011111 NA coding upstream 392070 11638002 ~ 11642227 (+)
AMCG00011134 NA coding downstream 6662 12045035 ~ 12050580 (+)
AMCG00011142 NA coding downstream 105489 12143862 ~ 12148439 (+)
AMCG00011146 NA coding downstream 246499 12284872 ~ 12300928 (+)
AMCG00011147 dock2 coding downstream 275111 12313484 ~ 12322097 (+)
AMCG00011143 etf1,etf1b,LOC108437808 coding downstream 287724 12326097 ~ 12332753 (+)
G104512 NA non-coding upstream 55932 11977236 ~ 11978365 (+)
G104477 NA non-coding upstream 84585 11948240 ~ 11949712 (+)
G104489 NA non-coding upstream 102011 11930208 ~ 11932286 (+)
G104488 NA non-coding upstream 104283 11929213 ~ 11930014 (+)
G104483 NA non-coding upstream 113100 11919874 ~ 11921197 (+)
G104596 NA non-coding downstream 112992 12151365 ~ 12151633 (+)
G104603 NA non-coding downstream 211886 12250259 ~ 12254820 (+)
G104609 NA non-coding downstream 221239 12259612 ~ 12259861 (+)
G104627 NA non-coding downstream 294955 12333328 ~ 12334214 (+)
G104666 NA non-coding downstream 391123 12429496 ~ 12434556 (+)
G104435 NA other upstream 190208 11842129 ~ 11844089 (+)
AMCG00011115 NA other upstream 223475 11808846 ~ 11810822 (+)
G104382 NA other upstream 362957 11666198 ~ 11671340 (+)
AMCG00011110 zn706,LOC103364770,LOC104931588,LOC101168967,LOC102235987,LOC101064701,LOC103393878 other upstream 383276 11644017 ~ 11651021 (+)
G104273 NA other upstream 1214874 10818688 ~ 10819423 (+)
G104550 NA other downstream 28121 12066494 ~ 12067337 (+)
AMCG00011141 LOC567622,LOC108413244,LOC103367052,LOC101466533,LOC107379323 other downstream 29078 12067451 ~ 12140465 (+)
G104694 NA other downstream 486987 12525360 ~ 12527031 (+)
G104719 NA other downstream 571756 12610129 ~ 12619055 (+)
AMCG00011163 reep2,LOC107557670,LOC107588406 other downstream 632003 12670376 ~ 12679429 (+)

Expression


Co-expression Network