AMCG00011135


Basic Information

Item Value
gene id AMCG00011135
gene name NA
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 12066495 ~ 12069079 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00011135
cactgagaggagagaggaggagtgaCTGAGGTAGGAAGGCAGTGAGGGgggtgagacagagagagagagggagcagccTGGTCGGTGTGACAGCACAGAGCCCCACTGCACGATGTTTGGGCTTTGTCCAAATCAAGCCCTGAACCCAGCATTTGTGGGGGTCGGAGGTCAGGGGTCTGAAAGTGGAGGAGTAGGGGGTGTGTCCTCATCCTCCCTGCATCTCCTGAGCAACCTGCAGTCAGACAGGAAGTGCAGTGTGGCCCCTGACAAGGATGGCAACTTCAACTTCCTGGGTcaagaggaagagcaggagggGAAAAGAGGGATGGAGGGCCTGAGCCTGGTGACCCCGGTGATCCCGCTGACTCGTGATGAGAACCTCAACCAACTGGACCCCCCAGCCCAGAAGCAGCAGAGCCAGCAGAACCACCCGGCCCGGCCCAGTCTGCCTCCCCGCCTGCCTTGCTGGAGGAGTCTGGAGCCAGTGCCTGAGGGGGGAGAGGAAGTGGTGAGAGTGCCGCCCGAGGGAGAGGAGGGCCGAGGCAAAGTGgaccgagagggagagagggaggggctggaggaagggagggaggaggaggaggaggaggaggagggagagggggatgaggAGGacgatgaggaggaggagggggaaagTGGCTCAGAGTTCAGCTGCAGGTCCAGcagctcctcctcttcctcttcctcatcctcctctctGGGCATGGAGAGCGGGACTGAGGAGGGGGGGGCGCTGGGCTGCATTTGGGAGCGTATCTGCAGGGGGGGGCCAAGAGCGGCAGAGCAGCTGGCCAGCTCGAGGACTCCGCTGCAGGAGGGAGACgtagagaaggagggagaggaagggagggaggaggaggaaggggaagTGAAGGGGTCAGACTCTGGAGCAGGAGTGGGTTTGCTGCCACCCCCCCCAGGCCCCCCAGTGTCAGACTCGGACTCAGACCCTAGCCTGGTCCTACCTGAGCTGCTGCAGGCCGTGTGGACACTGCGGGACCGTGAGCGCTTCAAGGCCCAGGAGAAGGAGCGGCACCAAGTCCAGCTCACCATGTACCGGCGCCTGGCCCTGGTGCGCTGGGTCCGTGGGCTGCTGGCACGGGTCCGAGAGCAGCAGGGCCGCCTGCAGGGCAGCTATGACATCATCCTCACACACCGGAGGGAGCTGCTGCGTCGGGGGGGCAGGGCCAGCCAGGCATAGGGGTGgcgtggggagagagggagggggagagagagactgcaggAGGTGGGTAGCACACAGCTCTCTCTGAACCCACAGCCCTGCCCCACAGTGACCCTGACTCCTCCTCTGCCCTTGACTCACACCCCACACTgacacccacactcacacaaacaccccCAAGCCGTGTTATTAAGACACTGTATGCCACTGTATCTCCTGCTGTGCTCTGTACCTACTCAGCCCTCACCATACTCTGTACTTCAGTGCAGCCTGTATGTCTCTCTGCTGTCTGTTTGACTGTGGTTTAATAAACACTGTGATCTGTG
>TU130749
TAAAcactgagaggagagaggaggagtgaCTGAGGTAGGAAGGCAGTGAGGGgggtgagacagagagagagagggagcagccTGGTCGGTGTGACAGCACAGAGCCCCACTGCACGGTCATGTTTGGGCTTTGTCCAAATCAAGCCCTGAACCCAGCATTTGTGGGGGTCGGAGGTCAGGGGTCTGAAAGTGGAGGAGTAGGGGGTGTGTCCTCATCCTCCCTGCATCTCCTGAGCAACCTGCAGTCAGACAGGAAGTGCAGTGTGGCCCCTGACAAGGATGGCAACTTCAACTTCCTGGGTcaagaggaagagcaggagggGAAAAGAGGGATGGAGGGCCTGAGCCTGGTGACCCCGGTGATCCCGCTGACTCGTGATGAGAACCTCAACCAACTGGACCCCCCAGCCCAGAAGCAGCAGAGCCAGCAGAACCACCCGGCCCGGCCCAGTCTGCCTCCCCGCCTGCCTTGCTGGAGGAGTCTGGAGCCAGTGCCTGAGGGGGGAGAGGAAGTGGTGAGAGTGCCGCCCGAGGGAGAGGAGGGCCGAGGCAAAGTGgaccgagagg

Function

GO: NA

KEGG:

id description
ko05032 Morphine addiction
ko05033 Nicotine addiction

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00011135 True 1530 mRNA 0.62 2 12066495 12069075
TU130749 False 567 TUCP 0.61 2 12067465 12069079

Neighbor

gene id symbol gene type direction distance location
AMCG00011139 psmb2,LOC107591978,LOC107592948,LOC107688376 coding downstream 6870 12053638 ~ 12059625 (-)
AMCG00011137 LOC107589451,LOC104962793 coding downstream 33096 12015153 ~ 12033399 (-)
AMCG00011138 NA coding downstream 57542 12004096 ~ 12008953 (-)
AMCG00011129 NA coding downstream 81687 11978953 ~ 11984808 (-)
AMCG00011128 NA coding downstream 108187 11952116 ~ 11958308 (-)
AMCG00011136 NA coding upstream 2588 12071667 ~ 12085428 (-)
AMCG00011150 NA coding upstream 196428 12265507 ~ 12275549 (-)
AMCG00011149 NA coding upstream 231706 12300785 ~ 12306207 (-)
AMCG00011151 NA coding upstream 319184 12388263 ~ 12402070 (-)
AMCG00011159 NA coding upstream 428268 12497347 ~ 12499099 (-)
G104545 NA non-coding downstream 27119 12039169 ~ 12039376 (-)
G104513 NA non-coding downstream 88207 11977351 ~ 11978288 (-)
G104449 NA non-coding downstream 369436 11663592 ~ 11697059 (-)
G104376 NA non-coding downstream 409662 11649005 ~ 11656833 (-)
G104342 NA non-coding downstream 472153 11587058 ~ 11594342 (-)
G104568 NA non-coding upstream 7649 12076728 ~ 12144122 (-)
G104591 NA non-coding upstream 66889 12135968 ~ 12142015 (-)
G104598 NA non-coding upstream 87363 12156442 ~ 12156731 (-)
G104660 NA non-coding upstream 305988 12375067 ~ 12379667 (-)
G104665 NA non-coding upstream 333285 12402364 ~ 12402564 (-)
AMCG00011140 NA other downstream 68709 11990829 ~ 11997786 (-)
AMCG00011125 eef1a1l2,LOC107589444,LOC107706209,LOC107654701,LOC100136525,LOC105027913 other downstream 95493 11959238 ~ 11971002 (-)
AMCG00011086 NA other downstream 2322710 9741133 ~ 9743785 (-)
AMCG00011084 dlgap3,LOC106933674,LOC106958363 other downstream 2447216 9601377 ~ 9619279 (-)
AMCG00011058 srrm1,LOC107583602,LOC107721297,LOC106579139 other downstream 2830267 9222268 ~ 9236228 (-)
G104629 LOC100194717,LOC107660902,LOC107754487,LOC107655673 other upstream 257018 12326097 ~ 12328282 (-)
AMCG00011152 kcnip1 other upstream 358914 12427993 ~ 12457327 (-)
G104715 NA other upstream 479210 12548289 ~ 12548993 (-)
G104749 NA other upstream 565777 12634856 ~ 12640227 (-)
AMCG00011169 NA other upstream 751946 12821025 ~ 12826880 (-)

Expression


Co-expression Network