AMCG00011136


Basic Information

Item Value
gene id AMCG00011136
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 12071667 ~ 12085428 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00011136
CGCGCGGCTGCGGGATTAACCGCGAATTTATAGGAATTTCGCTTGAATTTGATATACTTACATCTCTACATACTGCATCCGGAGATACAGGCTAGTGGACGTGgcctttaatgatttttaagGCTGTGGAGGTGCTGTctggggacagacagacagctacAGAGGAGAGTGACGTGGACAGTGGGAAGGGAAGTTGTGGAATGGGCTCCCCAGGATGGGCAGAGGGGGGTGCTGTGCCAGTTGTTAGCGCTGAGCAGCAAGACTCTGATGAGGAGGTGACTGTGAACAGGAAGTCTCGCTGCAGGAAGGCGCTGAGAGACAGCGACAGCGAGGCAGAAGAAGGAGTGGGGCTTACTGGGGCTCTTGTCCTATCCGAGTCCAGCGAGGAGGAGCAGATGCAGGAGGGTGATGTCGAGAGTCCAGGGAAGGGGGTGCGCAGAGTTGCTCGGCTCGCTCTAGACAGTGAGGACAGTGAGACGGACAGACAGCCAGATGGGGGCCAGGGTGAAGAGTCCCCTCCCAGGgagaagggaggggagggagcaAGGGAGAGGAAGCCGCAGAGGTCCCAGCGCCGCAGAGAGAAGGCACAGAAGAGGGTGAAGGCTGTGGAGAGGctgaagaagagggagagaggagagCAACTTTCCGCTTCCCTGAATGACAGCGGCTGTCTACTTGGGGACAGTGACCTGTTTGACACGGGCctgggggaggaagaggaggatgaggaggagtcTCTGGAGGCGATCCGGGCAGCCGTGAAGAAGGCGGTCAAGAAACAAAAGGAGCAgggcgaggaggaggaagaggagtcAAAAGGGGACCACAGGGCCGGACGCAAGGAAAGGAAAGCAGCCCGAGCTGGTAGGGAGGCATTGAAACAGCTGCACAGTGAGAGCCAGAGACTCGTCCGAGAGTCGTCCTTGGGGCTGCCGTACCACCTGCCAGAGCCCAAGACCATTGAGCAGTTCTTCAGGAGGAGAGCCCAGCCTGCTGGCCCTGCCATGGCCCTACTGAAGTCCACTAAATACCAGCCCTGCAGCTTAGCTGGTACTTCCCACCCCCAGGAAGACCAGAACCAGCCCAAACAACCCCAGCAGCCTGCGGTGTCGGACCCAGAAGCTCGTCAGGCAGAACCTGAGCCGCATGCGACCTCCCAGAACCCAACTGAAGAGCTGGATCCTGCAGGAGTCCATGAGAGCCCAGCCAGTGTGGATCAGAACCAGGAAGAGCTGGTCACAATGTCAGCTGTCACAGAGCAGAGACTGCTGGTGTGGGAGAACAGCGCTGAAGAGTCCAGTCTGGGGACAGAACCAGTGAAAGAGGGACCTGCAGCTGCTCAGAACCAGGCTGGACAGGAGCTACTGGAACAACAGAGTTTGGAGACAGGGGTGGAAGAGTTGGGGGGCAGGGAGAGTATGCAGGCCACTCCTCTGCCCCCTGCCACCACTGCCCGCAAGGACAGGCTGGCCCGGCTCCGGGAGATGGGGTTGGACCCACTGCCCATGCCCAGACTGTGTCCTGATGATGGTGCCTTCATACAGCTGGAACCCCCTCCTGTCAACTTGGGCCTGGAGAAGCTGAAGCAGAGGTTTCTTCACCACGTCCAGCCTCCCCCACGGGCACGGTCAGAGCGCAGCCTGCAGCTCAGCGTCCTGCGCAAGGACACCACCCCCTCCGGGCAGCTGCAGTTGCTGACCGACACACTGACAGTCACTGTCACTGAGGGAGATGAGGAGCTGCTTTTGTTGAAGTCTCGACTGCAGCTGGCAATGGCCCAGAAGCGTCAGGAGGAGAGGCAGCGGCGGGCAGCTCTGCAGCGTCTGGACAATGAAGAGtgtgaggaagaggaagaggaggaggaagagatgaCAGACGAGTCCGAGGGAGAGCTGCTGGAGACGGGAGATGCAGAGAGTGCCTGTGTCTCTTATAGGGAGCAGACTGGGGATGCATTGAGGAGAGCTGGGCCAACAGGGCTGGAGGGAGACTCCAAAATGGtctcAGAGGAAGATGACTCCCTGCCCAAGGACAACAGCCACAACAGCAGCTTTGAGCTGATTGGTTCCATGATCCCATCCTACCAGCCAGTGAACAGGGCAGCTGGTAGGGGTGTGTCTGCCGGAGTGTTCCGCTCGCCGTCCCCGGGATTCTATAGGCCCAGCTTCCTCAGCTCCACCTCCAAGAGCTCAGGGAAGTTGTCAGacccctccctgtctctgtccctgccAGTGGAAGACTCCCAGGACCTGTATGCCCCCCCATCTCCTGCTGAGGCTGGTCCTGGGCCCCTGGGAGCCGGGGACTCACAAGGCCGCTTCTCCCTGGAGGAGGACACCCACAGCCAGCTGCTGGATGCTGACGGCTTCCTGAACGTGGGCCCACGAGGTGCTGGGCCAGGCCAATACCGCAGCCTGGGCCAGAACCACAAGCGGCAGTTGCTGCTGGACAGTCTGGACGAGAACGCCATGGATGCCAACATGGGCGAGCTGCTAGGTCTCTGCTCTGGCGGCTTTGGCACACGGCACCACTCCGGCCCTGGCCACAGTGGGGAGCCAGCCACCACTAGCCAGGACAGCACTGTGGGTGAGCTGCTGGGGCTCTGCTCAGGTGGCTTCGGCACACCGGACTGTGCCACGCAGCGGGGTAGAGCAGAAGAGGCCCCGCCACGGGACATCCCTGTGCTGGGGCGGCAGGAGGAGCCTGGCTCAGACACGGATAGGGATGAGCTGCTGGCTCTGTGCTCTGGGAAATTCATGACTCCAGAATGCTCACCCTCCCATTCCTCCTCCAGTGCTTCTGCACAGACTGAGACTGGCCCCAGAGACAGGAtggagcagagagaggaggaggaggagcaggaggaggaagactgCGAGTTTCACCTGCTGTCAGATGTGGGCAGCCTGAGTGACCAGGAGGGGAGCGAGGAAGAGGAGCAGGCAGAGGAAGATGATGGAGAGAacgagggagaggaggaggaggatgaagaggagGCTATGGCCCGACGAGGAGTGAAGCGCAGGATgcgTCTGGCTCAGTtcctggaggaggaggcagagctgTCGGGCAGTGAGCTGGGCAGTGAGGATGAGGAGGACGAGGGCGAGGGCAGTGAGTACGAGGAAGAGGAGTTGCAGGAGGAGCTGCCTTCAGATGAGGAGCTCCAGGACCAGGTCAACAGGATCCACATGAAGCAGGTGCTGGATGATGACAAGCGACGACTGCGTCTGTATCAGGAGCGCTATCTCGCAGACGGGGACCTGCACTCTGATGGGCCGGGCCGGGCCAGGCGCTTCCGCTGGAAAAACATTGATGAGCTGCTAGAGGCAGGGCTGGCGGGGGGTGatgagcaggaggaggaggaagaggaggatctGGACGAGGCTGAGGTGCAGAGGAGGAAGAACAGGCTGGAAAGAGAGCAGTGGTTGCgagagcagAGCTCCAGCACAGAGGCacagaaggaggaggaagaggaggaggaggaagacatcGGCGAGGAAAGTCAGTTCATGAAGTTGGCCAAGAAATTTACCACCAAGAAACTGCAGCAGAAAGAAGCACCCCTGGTACCCAAGGAGACGAAGgtgCGGAGAGGCTCTTTGCTCAGTCAGCCCCGGGCCGTGCTGCAGAAGCTGGCCTCCCTGTCTGACCTGGCCCCCGGCGCCCCGCGCAGCTCTCGCGGCTTCCTGTTCCACACACTGACGCctgagaaggagggaggggccGAGCGCCTGGCCGCACAGGGGAAGAAACGCAGTAAGATGCACAGTGGAGCCCCTCCAGCCAAAAAGCCCTGCATAGAGGCCCCCACCGCCTCCAAGCTCAGCATCTTCCGCTATCTAGAGAGCTGAGGAGCCCAGGATGTGGGTGGGAGGGGTGTGCACTGAGCACTGGACAGAAAGCAGGAGACAGTGTGGCTGTGCTGAGGAGGGTCAGGAGGTCAGAGAGAGATACCaaatacacgcacacactcaaTGTCACACTCGCTTCAATACAAACATGCTCTCGCTCATACACATAGCACTTATCTCTGCTTTCTGTCACACTTGAGCTCTCGCACAGAACCTGGGCTGCCCTGTGCCCCCCGCCCTGCTGCTCAGAACCACAGTGTTGACCACAGGACCCCACTGCTCCTAGGGGGCAGTGATTGTCAGACTTCCAGAACATGTACACCACCCCCTATAAGAACCCTCGCTGGACCCCTAGGAACCTCCTTGgtagaattttttttaatcagattttaatgttcagttttatttttaaattgtaaatggcTATAGTTATTTTCTATTGTGTTTTCAAGCTGTATAttaaagattttaataaaaaaatatatatgtaaaaa

Function

GO:

id name namespace
GO:0005657 replication fork cellular_component
GO:0004329 formate-tetrahydrofolate ligase activity molecular_function

KEGG:

id description
ko04111 Cell cycle - yeast
ko04113 Meiosis - yeast

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00011136 True 4354 mRNA 0.59 23 12071667 12085428

Neighbor

gene id symbol gene type direction distance location
AMCG00011139 psmb2,LOC107591978,LOC107592948,LOC107688376 coding downstream 12042 12053638 ~ 12059625 (-)
AMCG00011137 LOC107589451,LOC104962793 coding downstream 38268 12015153 ~ 12033399 (-)
AMCG00011138 NA coding downstream 62714 12004096 ~ 12008953 (-)
AMCG00011129 NA coding downstream 86859 11978953 ~ 11984808 (-)
AMCG00011128 NA coding downstream 113359 11952116 ~ 11958308 (-)
AMCG00011150 NA coding upstream 180079 12265507 ~ 12275549 (-)
AMCG00011149 NA coding upstream 215357 12300785 ~ 12306207 (-)
AMCG00011151 NA coding upstream 302835 12388263 ~ 12402070 (-)
AMCG00011159 NA coding upstream 411919 12497347 ~ 12499099 (-)
AMCG00011154 NA coding upstream 420386 12505814 ~ 12507945 (-)
G104545 NA non-coding downstream 32291 12039169 ~ 12039376 (-)
G104513 NA non-coding downstream 93379 11977351 ~ 11978288 (-)
G104449 NA non-coding downstream 374608 11663592 ~ 11697059 (-)
G104376 NA non-coding downstream 414834 11649005 ~ 11656833 (-)
G104342 NA non-coding downstream 477325 11587058 ~ 11594342 (-)
G104591 NA non-coding upstream 50540 12135968 ~ 12142015 (-)
G104598 NA non-coding upstream 71014 12156442 ~ 12156731 (-)
G104660 NA non-coding upstream 289639 12375067 ~ 12379667 (-)
G104665 NA non-coding upstream 316936 12402364 ~ 12402564 (-)
G104680 NA non-coding upstream 344537 12429965 ~ 12493101 (-)
AMCG00011135 NA other downstream 2588 12066495 ~ 12069079 (-)
AMCG00011140 NA other downstream 73881 11990829 ~ 11997786 (-)
AMCG00011125 eef1a1l2,LOC107589444,LOC107706209,LOC107654701,LOC100136525,LOC105027913 other downstream 100665 11959238 ~ 11971002 (-)
AMCG00011086 NA other downstream 2327882 9741133 ~ 9743785 (-)
AMCG00011084 dlgap3,LOC106933674,LOC106958363 other downstream 2452388 9601377 ~ 9619279 (-)
G104629 LOC100194717,LOC107660902,LOC107754487,LOC107655673 other upstream 240669 12326097 ~ 12328282 (-)
AMCG00011152 kcnip1 other upstream 342565 12427993 ~ 12457327 (-)
G104715 NA other upstream 462861 12548289 ~ 12548993 (-)
G104749 NA other upstream 549428 12634856 ~ 12640227 (-)
AMCG00011169 NA other upstream 735597 12821025 ~ 12826880 (-)

Expression


Co-expression Network