AMCG00011149


Basic Information

Item Value
gene id AMCG00011149
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 12300785 ~ 12306207 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00011149
ATGGGGCGACGGGCAGCTGAGCCCTCGTATCCCGTGCCGGCTCTGGGCTTCCCGCTGGCTGGGGGCCAGGGCTGGAAGGCGGGTGGGGAGGTGAAAGGTCAAAGGCAGCGGGCACAGGGGGAgttggaggggtggggggtgatggGGTCACCACAGCAATGGGGTTCACTAACGTTTCCTGGGCTGTGCAGTGTGGGAGTGCAGACCTCCCCTGGCCTCAGACCTCCCCCCAATACACAACACCCCACACCATCAGCCAATCACATCGCACCGGGGGACTGTGGTCGTAGGCTCTCTGCTGATGTCAGAGAGGGCTTGTCATTGGTTGACATAAGGGACGTGACCCACTGTGACTTCAAGAGGGGAGGAGCCTCTACTACCAAAGAGGGTGGGGCTTTGAAAGATATTGTTGAGGGATCAGTGGGTGGAGTCTACAGCACTGTTGGTGGGGGCTCCCAGCCACAAGGGGGCGGGGCTCCAGGTAAAGCAACACGTGGAGTGGCCTCTCTGGACAGAGCGAAGCGGAGCTCTAGGTACACCAATGGGAGTGTGGTTGGCCCGGAGATAGTGGGGGGAGTCTGTAGTGATGGCAATGGAGGGGCCCCAGGGACTCCAAAGAAAGATGGTGGATCTGAAGAGAGTCACAGTGCAGGGGGGCAGAAGAGGGCCGCTGAACGAGCAGCAGAGCCTCCCCCGCCATGCAGAAGCCCCTGCGCCCCACCCCCCCGAAGCTGCGCTCAGTGTGGCAGGAAGCAATCCCTGCCCCCCCCCTGTTTGGTGCTGCACTGCCGCAGAAGGGGGGGGCGTATGAGGAATGGTGCCTCCCCCATGTCCACcacctgcagcacacacagtgcTCCCCAAGACCAGAGCCCATCCCACCCCACTGCCACCCCACCACGAGAATCTGCCCCTCCTCGGAACACACACCAATCTAAACTGCCCTCGAGAGACCTCCACCACCCCAGCACTGCCCCTCCACACACAAACGAACACACCCACCCCATACAGGTAGTCCCCCCCAAAATGGATCATgcaccccccccactccccaagCAGAATGGCCTGACGGGGAAGCGTGTCCGGGGGGGGCAGAGGGGGCAGGGGGGTCTGCATGGGCGACTGCAGAGGGTGGAGGAGAGGCTGCTGTCCAATCAGGAGAAGATCAGGGTGCTGCTGAATGTGATCCAGGACCTGGAGAGGAACCAGGCTCTGAACCAGggACGCTGTTCATACCGGACTGGCCAGGACCTTAACAACTGCCCAACTTGCCAGAAAACAGCCTGCATCATCTACAgtgTGGAGCATGATTTCAGGCAGCAGGAAGGCCGGTTCCAGGGGGTGCTGCAGTGTCTGATGGGCGAGGCAGAGGGCCCCCTCAAACAACCTCCCCCCTCACCCTCACCACCGACGCCACCCCCCCCGCCAACCGCCCCCCATGGAGTCAAGAGCAAAGCCAAGAAACTACGCAGGAAGTGCTTCTGTCCCCACCAGCTCAGCCCCGCTGTGCTGCACCACAggcctgtctctgtccctgctAATGAGCTGGGAGGTctgactcagagagagagatggtgtgtg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00011149 True 1581 mRNA 0.62 4 12300785 12306207

Neighbor

gene id symbol gene type direction distance location
AMCG00011150 NA coding downstream 25236 12265507 ~ 12275549 (-)
AMCG00011136 NA coding downstream 215357 12071667 ~ 12085428 (-)
AMCG00011139 psmb2,LOC107591978,LOC107592948,LOC107688376 coding downstream 241160 12053638 ~ 12059625 (-)
AMCG00011137 LOC107589451,LOC104962793 coding downstream 267386 12015153 ~ 12033399 (-)
AMCG00011138 NA coding downstream 291832 12004096 ~ 12008953 (-)
AMCG00011151 NA coding upstream 82056 12388263 ~ 12402070 (-)
AMCG00011159 NA coding upstream 191140 12497347 ~ 12499099 (-)
AMCG00011154 NA coding upstream 199607 12505814 ~ 12507945 (-)
AMCG00011157 nhp2,LOC107673822,LOC107590037,LOC107684699,LOC107715316,LOC106603897 coding upstream 204617 12510824 ~ 12527131 (-)
AMCG00011156 NA coding upstream 223623 12529830 ~ 12541377 (-)
G104598 NA non-coding downstream 144054 12156442 ~ 12156731 (-)
G104568 NA non-coding downstream 156663 12076728 ~ 12144122 (-)
G104591 NA non-coding downstream 158770 12135968 ~ 12142015 (-)
G104545 NA non-coding downstream 261409 12039169 ~ 12039376 (-)
G104513 NA non-coding downstream 322497 11977351 ~ 11978288 (-)
G104660 NA non-coding upstream 68860 12375067 ~ 12379667 (-)
G104665 NA non-coding upstream 96157 12402364 ~ 12402564 (-)
G104680 NA non-coding upstream 123758 12429965 ~ 12493101 (-)
G104697 NA non-coding upstream 217630 12523837 ~ 12524358 (-)
G104776 NA non-coding upstream 454838 12761045 ~ 12763667 (-)
AMCG00011135 NA other downstream 231706 12066495 ~ 12069079 (-)
AMCG00011140 NA other downstream 302999 11990829 ~ 11997786 (-)
AMCG00011125 eef1a1l2,LOC107589444,LOC107706209,LOC107654701,LOC100136525,LOC105027913 other downstream 329783 11959238 ~ 11971002 (-)
AMCG00011086 NA other downstream 2557000 9741133 ~ 9743785 (-)
AMCG00011084 dlgap3,LOC106933674,LOC106958363 other downstream 2681506 9601377 ~ 9619279 (-)
G104629 LOC100194717,LOC107660902,LOC107754487,LOC107655673 other upstream 19890 12326097 ~ 12328282 (-)
AMCG00011152 kcnip1 other upstream 121786 12427993 ~ 12457327 (-)
G104715 NA other upstream 242082 12548289 ~ 12548993 (-)
G104749 NA other upstream 328649 12634856 ~ 12640227 (-)
AMCG00011169 NA other upstream 514818 12821025 ~ 12826880 (-)

Expression


Co-expression Network