AMCG00011167


Basic Information

Item Value
gene id AMCG00011167
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 12596134 ~ 12605644 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00011167
ATGAGTGACAGCCCGGCCCTGGGTGCCGGCCTGTCTGTGCGGGCCGGCTGCAGTGCTCGACTGGGCCTGTGCAGAGAGAGGGCACCCCCCTCGCCCGACAGGCTGCTCTCCCCGCTCACGCAGCTGGCGCACAGCTTCAGCGGACTGGGCGGCTTCCGGAACGGggacACCCCACGCCGCTGTCTGGATCTCTCTGCTCTCAGCACCGATGCCTCTCCCTGCGGCCCCAGACCAGATCAGTCAGTGTCACCCTCTTCCTTTCCCCCCGAGTCTCCGCCGCCCAGTCTCCCTCCGAGAGCCACTCCCGACAAGGACACAGCCAAGAGCGTaagaCATCGCTTGAAGAAGTTCCAGTCTATACTGCCCATGTTGTTGTGCAGCAGTCCGAAGCAAGGCTCTGTCAGCCCAGTGGTAGCAGCTCCCAGCAGCCCCCTGGACAGCAGCCACAACAAGGAAAACGACTGCAGTGGGCTGTTGGTGAGCTCTGTGGAGGTGGACGCTGAACTGGAGGGTGAGATGGGTGGTCTGGGCAGCCCCATTTCCTCTGGTCCCCCCTCGCCCCCTCCAGCAGCCCTGCCTGCCCCCCCGCCACTCCTCCAAGATGGCTTCAGCGAGTTCATGGAAACTGATGAGagtGTCACTAATGTCCACATGACCTCCAGTATGGCTCTCCTGCTCTCTGACCCCCTCATGACTCAGGACATGGATCTGTCCACTttgtCAGTGTGCTCCCGTGGGGGCGCCGCAGGGGGAGGCAAGCGCCTGTTCCGATCCCCCTCCATGCCTGAGCGTCTGGACAAGGCTGTTCTCCGGAGAGCGCAgcccccctcctcttcctcggcCGTCTCCGCATCCACCCGTGCCCGTACCCCCCCGCGCAGCAAACGCTATCGCAACGACTCCTCCCCGAttccggagagagagagggaggaggatgaggaggggTGGGTTGAAGAGAGCAGGTCTGGCGATGCTTGCAAGAGGAGGTGTCTCCTGCAGAAGACCGTGTCCCTGTGCGAGGAGGAGCTGGGCAGAGAGGGGGCGCACTGCCAGCTCACTGGAGACTTCAGCAAGGTGTGCGCACTGCCCATTGTGAGCGGGAGACACCAGGACCTGAAATACATCACGGCCGAGACGCTGAGTGCTGTGCTGGCAGGGCAGTTCTCCAGTCTGGTGGAGAGCTGTGTGCTGGTGGACTGCCGCTACCCCTACGAGTATGAGGGGGGACACATCAAGGATAGGAATATCTACCCcactctctccatttctctctctcttgaatAA

Function

GO:

id name namespace
GO:0005657 replication fork cellular_component

KEGG:

id description
ko03008 Ribosome biogenesis in eukaryotes

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00011167 True 1284 mRNA 0.62 13 12596134 12605644

Neighbor

gene id symbol gene type direction distance location
AMCG00011166 NA coding downstream 721 12582105 ~ 12595413 (-)
AMCG00011155 cdc23,LOC107692994,LOC106603039 coding downstream 39491 12551208 ~ 12556643 (-)
AMCG00011156 NA coding downstream 54757 12529830 ~ 12541377 (-)
AMCG00011157 nhp2,LOC107673822,LOC107590037,LOC107684699,LOC107715316,LOC106603897 coding downstream 69003 12510824 ~ 12527131 (-)
AMCG00011154 NA coding downstream 88189 12505814 ~ 12507945 (-)
AMCG00011170 NA coding upstream 209783 12815427 ~ 12819344 (-)
AMCG00011173 NA coding upstream 360893 12966537 ~ 12984196 (-)
AMCG00011175 NA coding upstream 379741 12985385 ~ 12986581 (-)
AMCG00011178 slu7,LOC107741361,LOC107550887,LOC107756482,LOC107680665,LOC107676532,LOC107601502 coding upstream 383005 12988649 ~ 12999288 (-)
AMCG00011180 NA coding upstream 398894 13004538 ~ 13013351 (-)
G104697 NA non-coding downstream 71776 12523837 ~ 12524358 (-)
G104680 NA non-coding downstream 103033 12429965 ~ 12493101 (-)
G104665 NA non-coding downstream 193570 12402364 ~ 12402564 (-)
G104660 NA non-coding downstream 216467 12375067 ~ 12379667 (-)
G104598 NA non-coding downstream 439403 12156442 ~ 12156731 (-)
G104776 NA non-coding upstream 155401 12761045 ~ 12763667 (-)
G104845 NA non-coding upstream 323028 12928672 ~ 12931083 (-)
G104846 NA non-coding upstream 329838 12935482 ~ 12940160 (-)
G104915 NA non-coding upstream 770489 13376133 ~ 13376997 (-)
G104916 NA non-coding upstream 772413 13378057 ~ 13378299 (-)
G104715 NA other downstream 47141 12548289 ~ 12548993 (-)
AMCG00011152 kcnip1 other downstream 138807 12427993 ~ 12457327 (-)
G104629 LOC100194717,LOC107660902,LOC107754487,LOC107655673 other downstream 267852 12326097 ~ 12328282 (-)
AMCG00011135 NA other downstream 527055 12066495 ~ 12069079 (-)
AMCG00011140 NA other downstream 598348 11990829 ~ 11997786 (-)
G104749 NA other upstream 29212 12634856 ~ 12640227 (-)
AMCG00011169 NA other upstream 215381 12821025 ~ 12826880 (-)
AMCG00011174 slc23a1,pwwp2a,LOC106603911,LOC102781148 other upstream 336746 12942390 ~ 12956267 (-)
G104909 NA other upstream 759439 13365083 ~ 13367074 (-)
G104929 NA other upstream 1060151 13665795 ~ 13679262 (-)

Expression


Co-expression Network