AMCG00011175


Basic Information

Item Value
gene id AMCG00011175
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 12985385 ~ 12986581 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00011175
cTCCCTCCTCCATCATGCTGTTGCACTTCACTCTCCTGGCCTGTCTGGTCCCGATAGCGCAGGCTCAGGTGACAAGCGGTGGGCACAAGAAGGGCAAAGTCTTCACCATCAACTCCTCCCAGTTGGTCTGCAGCCTTCCCGGCCCCTCCGGGCCCCCAGGACTCCCTGGCACCCCGGGGCCCTCTGGCAGCATGGGGAGAATGGGCTTCCCGGGGAAAGATGGGAAAGAcggggaggaaggggagcagggTGAAAAAGGAGAGTCAGGTGATTTGCACAGACGGGGGGCAGAGggagaagggGGAAGCCAGGGGGTGGTGGGCAAGGCGGGGCCTCGTGGGCGGAAGGGGCAGCGTGGGGACCGGGGGCTGGCAGGCATCGGAGGTGTTAAGGGGCAGGCAGGCGACGAGGGCCAAACTGGGCGGCCAGGGGGGTGCCTCTGCGGGGCCAACGGGGCGCGCTCGGCCTTCTCCGTGGCGGTGACCAAGAGCTACCCCAAGGAGCGGCTGCCCATCCGTTTCGACAGGGTCCTGATGAACGAGGGCGGTCACTACAACGCCAGTGCGGGGAAGTTCCTCTGCGCCATCCCAGGGGTTTACTACTTCACCTACGACATCACCCTGGCCAACAAGCACCTGGCCATCGGGCTGGTGCACAACGGCCAGTACAAGATCAAGACCTTCGACGCCAACACGGGCAACCATGACGTGGCCTCGGGCTCCACCGTGCTGCGTCTGCGGCGTGGGGACGAGGTCTGGCTGCAGATTTTCTACGCCGAGCAGAACGGGCTCTTCTTTGACCCCTACTGGACCGACAGCCTGTTCACTGGCTTCCTCATCTACCCTGACCTGGACACCCCGAGTGTGGCCGAGCCGGCCGAGGAgcagggggaggtggggggggagcaGGAAGAGGcgatgggagaggagggagtg

Function

GO: NA

KEGG:

id description
K24211 C1QTNF2; complement C1q and tumor necrosis factor-related protein 2

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00011175 True 935 mRNA 0.65 2 12985385 12986581

Neighbor

gene id symbol gene type direction distance location
AMCG00011173 NA coding downstream 1189 12966537 ~ 12984196 (-)
AMCG00011170 NA coding downstream 166041 12815427 ~ 12819344 (-)
AMCG00011167 NA coding downstream 379741 12596134 ~ 12605644 (-)
AMCG00011166 NA coding downstream 389972 12582105 ~ 12595413 (-)
AMCG00011155 cdc23,LOC107692994,LOC106603039 coding downstream 428742 12551208 ~ 12556643 (-)
AMCG00011178 slu7,LOC107741361,LOC107550887,LOC107756482,LOC107680665,LOC107676532,LOC107601502 coding upstream 2068 12988649 ~ 12999288 (-)
AMCG00011180 NA coding upstream 17957 13004538 ~ 13013351 (-)
AMCG00011179 NA coding upstream 33325 13019906 ~ 13034119 (-)
AMCG00011182 NA coding upstream 70152 13056733 ~ 13104555 (-)
AMCG00011183 NA coding upstream 200367 13186948 ~ 13192140 (-)
G104846 NA non-coding downstream 45225 12935482 ~ 12940160 (-)
G104845 NA non-coding downstream 54302 12928672 ~ 12931083 (-)
G104776 NA non-coding downstream 221718 12761045 ~ 12763667 (-)
G104697 NA non-coding downstream 461027 12523837 ~ 12524358 (-)
G104680 NA non-coding downstream 492284 12429965 ~ 12493101 (-)
G104915 NA non-coding upstream 389552 13376133 ~ 13376997 (-)
G104916 NA non-coding upstream 391476 13378057 ~ 13378299 (-)
G104921 NA non-coding upstream 566859 13553440 ~ 13555074 (-)
G104928 clint1a,LOC108441628 non-coding upstream 675605 13662186 ~ 13667716 (-)
G104998 rpl26l1,rl26,LOC105024418,LOC107381811,LOC100708525,LOC103144500 non-coding upstream 877940 13864521 ~ 13867615 (-)
AMCG00011174 slc23a1,pwwp2a,LOC106603911,LOC102781148 other downstream 29118 12942390 ~ 12956267 (-)
AMCG00011169 NA other downstream 158505 12821025 ~ 12826880 (-)
G104749 NA other downstream 345158 12634856 ~ 12640227 (-)
G104715 NA other downstream 436392 12548289 ~ 12548993 (-)
AMCG00011152 kcnip1 other downstream 528058 12427993 ~ 12457327 (-)
G104909 NA other upstream 378502 13365083 ~ 13367074 (-)
G104929 NA other upstream 679214 13665795 ~ 13679262 (-)
AMCG00011211 NA other upstream 1007402 13993983 ~ 13996589 (-)
G105050 NA other upstream 1080634 14067215 ~ 14068561 (-)
G105290 LOC108429417 other upstream 2383821 15370402 ~ 15373179 (-)

Expression


Co-expression Network