AMCG00011177


Basic Information

Item Value
gene id AMCG00011177
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 12999534 ~ 13004427 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00011177
TGCATCAAGAACAGTATGGAAAATCAAGTAGGTTACTAATAGTTGTAGTGTAATAGTATGCTCATGTTCATAGTATGTCAGTTAGTGTATGTGTaagtattgctattattattaacttttaaTAGAGAGCTGTATGGGTTATATTAGTGTACAGCACTTACTTCTCCACTTCGCTAGGTGTCAGACACGTGCAGAGCAGCAGCTGCGGCCTGCTTTAACTTCCGGGTCACTGAGAAGGGCGGGCTATTTCCCCAGCCGGGCCAATGAGAAGAGCGGGTTATTTCCCACGTTGACCAATGAGAAGGCAGATTGTTTCCCTAGCCGGCCAATGAGAAGGCGGGTTGTGGTTTAAATGAGCCGGGAGTACGGGTCGTCTTTGTGCCGGTTCATAAACAGAAGCGCTGTTTCGAGTAAAACGCGGATCCCGTGTAAACCCCAAACATGTCCACCATGATTTACGTTGACCAGGAGAATGGCCTGCTGGGAACGCCTGCCCCTCCGAAGAACCGAGCGAGGCTGCTTTCTGCTCCAGGTAACCCCGCAGAGCATGCACTCCGCACAGGCTGCGCTGCATCTGCTCCGTGTGATAACGCAGTGTCCGCACTCTGCCCCAGGCCGAGGCGCAAACAAGTGGCTGAAGACGCCCCTCTCGGGGAAAGGCCTGTGCGCTGCTCCCGGCGGGCTCTCTGCTCGGAAAGCCCTAGGAGCCGTGAACAAGATCCGCAGCACAGAGAAGGGCAAACCCGTAGTGACTCCCCTGCCAAGGGAGAAGACGAAGGCATGCAAGCCGCAGGTCAAGGAAGAAGTGTATCCAGAGATCGAGAGGTTCATCCCATACAATCCCCTGGaTTTTGAGAGCTTTGAAGTGCCGGAAGAGCAGCGTCTGAGCCACCTGTGCCTGGCCGGACTGGCAGTGCCAACACTGGtgccagaggaggaggagagcttGGACATGCTGGATGTCTGTCTGCAGCTCTCGCCTGTGAAGATGCCTAAAGGCAGGACAGGAGTCACCCATCTTCCACCACGAATATACCAGGGGAGTCATTACACTGAAGAGCACCTGTTCAGCAGCCTCCAGCCACCCTGCTCTCCCATACTGCTCCAACTCATCGCCATGCAATGGCACACACCAATGGACAGGATAAGCTTGTCTGTGACCGCTGACACCGTGTCTACACTTCCATTAATGGCCCCAGAGAAAAGTCTCAAATGGAACGAGACATCCAAGCTGGGGCAGGAAAactaa

Function

GO: NA

KEGG:

id description
K06635 PTTG; securin

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00011177 True 1249 mRNA 0.53 6 12999534 13004427

Neighbor

gene id symbol gene type direction distance location
AMCG00011172 NA coding upstream 37749 12960213 ~ 12961785 (+)
AMCG00011171 NA coding upstream 71572 12918054 ~ 12927962 (+)
AMCG00011176 NA coding upstream 84463 12901039 ~ 12915071 (+)
AMCG00011168 NA coding upstream 237218 12759630 ~ 12762316 (+)
AMCG00011161 NA coding upstream 334557 12649660 ~ 12664977 (+)
AMCG00011181 NA coding downstream 151824 13156251 ~ 13169149 (+)
AMCG00011184 NA coding downstream 186352 13190779 ~ 13215914 (+)
AMCG00011187 ubtd2,LOC107672801,LOC107718046,LOC108279301 coding downstream 280870 13285297 ~ 13314709 (+)
AMCG00011186 NA coding downstream 323955 13328382 ~ 13330598 (+)
AMCG00011185 LOC107723822,LOC107664350 coding downstream 344137 13348564 ~ 13367027 (+)
G104814 NA non-coding upstream 59364 12935436 ~ 12940170 (+)
G104800 NA non-coding upstream 168254 12830849 ~ 12831280 (+)
G104709 NA non-coding upstream 447670 12551040 ~ 12551864 (+)
G104666 NA non-coding upstream 564978 12429496 ~ 12434556 (+)
G104627 NA non-coding upstream 665320 12333328 ~ 12334214 (+)
G104835 NA non-coding downstream 14365 13018792 ~ 13019064 (+)
G104883 NA non-coding downstream 182521 13186948 ~ 13229416 (+)
G104910 NA non-coding downstream 548974 13553401 ~ 13555056 (+)
G104923 NA non-coding downstream 661520 13665947 ~ 13679380 (+)
G104979 NA non-coding downstream 853404 13857831 ~ 13858192 (+)
G104815 slc23a1,pwwp2a,LOC106603911,LOC102781148 other upstream 56452 12942380 ~ 12943082 (+)
AMCG00011163 reep2,LOC107557670,LOC107588406 other upstream 320105 12670376 ~ 12679429 (+)
G104719 NA other upstream 380479 12610129 ~ 12619055 (+)
G104694 NA other upstream 472503 12525360 ~ 12527031 (+)
AMCG00011141 LOC567622,LOC108413244,LOC103367052,LOC101466533,LOC107379323 other upstream 859069 12067451 ~ 12140465 (+)
AMCG00011204 NA other downstream 863910 13868337 ~ 13878282 (+)
AMCG00011210 bod1,LOC107581912,LOC107661728,LOC107713186,LOC107662284,LOC107587245,LOC108278584,LOC106603873 other downstream 981238 13985665 ~ 13992845 (+)
AMCG00011209 cpeb4,LOC106603870 other downstream 1008694 14013121 ~ 14061027 (+)
G105139 LOC100846954 other downstream 1615263 14619690 ~ 14620534 (+)
AMCG00011241 LOC102221627,LOC107740141,LOC107680337,LOC107593202 other downstream 2316353 15320780 ~ 15322658 (+)

Expression


Co-expression Network