AMCG00011180


Basic Information

Item Value
gene id AMCG00011180
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 13004538 ~ 13013351 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00011180
ATGATCACCCGCAGTGTGGGCGCGCGGCTGCCATTCCGTCCGCGCGGCGCTTCACGTCCGCCGGCTCGTGCGCTGCAGACCTGCGGGGGCGAAGGGGTTAATCACGCTGTTCAACCCGACACAGAGCTGGGCCGGGAGGACGTCGTACTGCTCCAGAGTGGTTTGCAACTTGGGGAGTTTGCGCTGCTGAGGGGATCAGTGTGTCTATACAGCGCGGCAGCCCACCACCGCAGCACAGGGGACGAGTGCCATGTAGACGAGCCAGCAGATGAGCCGAGCCACGTGATGACCATTAGGATGCTGGAACTCAGGGCCAGCAAACTGGAGGAGCAAGTTCAAGACCTCACTGAGAGGTACAAGAGAGCTGTAGCAGATTCTGACACGGTGCGCAGAAGAACACAGAAGTTTGTTGAGGATGCCAAGGTGTTCGGCATCCAGAGTTTCTGCCGGGACCTGGTAGAGGTGGCTGACATCCTGGAACGCACAGCGGGCGATGTGGAGTCAGAGTTCAGGGGTCAGGAGACCCAGAGAAGGCGAGCGGAGGGGGCGGCAGCAGGAGTGGCAGACCTGGAAGGGCAGGAAGGGGGCGAGGGGAGCCCGCCTCTGCACCGGCTCAGTGAGGGGCTGGCGCTGGTTCAGGAGCGGCTGCAGGCCGTGTTTACCAAGCATGGGCTGGAGAAGATGGCACCGGTTGGGGGGCGGTACGACCCCTACCAGCACGAGATAGTCTGTCACGTGGCGGCGGAGGAGGGGGGTGCGCAGCCGGGCACCATCGCGCTGGTCAGGCAGGACGGGTACAAGCTACACGGCCGCACCATCCGGCATGCGCACGTGGGGGTCGCTGTAGAGGCACAGGAGGACTGA

Function

GO: NA

KEGG:

id description
K03687 GRPE; molecular chaperone GrpE

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00011180 True 864 mRNA 0.64 5 13004538 13013351

Neighbor

gene id symbol gene type direction distance location
AMCG00011178 slu7,LOC107741361,LOC107550887,LOC107756482,LOC107680665,LOC107676532,LOC107601502 coding downstream 5250 12988649 ~ 12999288 (-)
AMCG00011175 NA coding downstream 17957 12985385 ~ 12986581 (-)
AMCG00011173 NA coding downstream 20342 12966537 ~ 12984196 (-)
AMCG00011170 NA coding downstream 185194 12815427 ~ 12819344 (-)
AMCG00011167 NA coding downstream 398894 12596134 ~ 12605644 (-)
AMCG00011179 NA coding upstream 6555 13019906 ~ 13034119 (-)
AMCG00011182 NA coding upstream 43382 13056733 ~ 13104555 (-)
AMCG00011183 NA coding upstream 173597 13186948 ~ 13192140 (-)
AMCG00011188 ublcp1,LOC106567438,LOC106603889,LOC107672805 coding upstream 315142 13328493 ~ 13343464 (-)
AMCG00011194 NA coding upstream 671283 13684634 ~ 13687704 (-)
G104846 NA non-coding downstream 64378 12935482 ~ 12940160 (-)
G104845 NA non-coding downstream 73455 12928672 ~ 12931083 (-)
G104776 NA non-coding downstream 240871 12761045 ~ 12763667 (-)
G104697 NA non-coding downstream 480180 12523837 ~ 12524358 (-)
G104680 NA non-coding downstream 511437 12429965 ~ 12493101 (-)
G104915 NA non-coding upstream 362782 13376133 ~ 13376997 (-)
G104916 NA non-coding upstream 364706 13378057 ~ 13378299 (-)
G104921 NA non-coding upstream 540089 13553440 ~ 13555074 (-)
G104928 clint1a,LOC108441628 non-coding upstream 648835 13662186 ~ 13667716 (-)
G104998 rpl26l1,rl26,LOC105024418,LOC107381811,LOC100708525,LOC103144500 non-coding upstream 851170 13864521 ~ 13867615 (-)
AMCG00011174 slc23a1,pwwp2a,LOC106603911,LOC102781148 other downstream 48271 12942390 ~ 12956267 (-)
AMCG00011169 NA other downstream 177658 12821025 ~ 12826880 (-)
G104749 NA other downstream 364311 12634856 ~ 12640227 (-)
G104715 NA other downstream 455545 12548289 ~ 12548993 (-)
AMCG00011152 kcnip1 other downstream 547211 12427993 ~ 12457327 (-)
G104909 NA other upstream 351732 13365083 ~ 13367074 (-)
G104929 NA other upstream 652444 13665795 ~ 13679262 (-)
AMCG00011211 NA other upstream 980632 13993983 ~ 13996589 (-)
G105050 NA other upstream 1053864 14067215 ~ 14068561 (-)
G105290 LOC108429417 other upstream 2357051 15370402 ~ 15373179 (-)

Expression


Co-expression Network