AMCG00011184


Basic Information

Item Value
gene id AMCG00011184
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 13190779 ~ 13215914 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00011184
ATGGCCTCCACCACGTTGAGCACAAAGAAGGGCAGCCAGCACAAGGCAGAACTTAGAGGCCCTCTTCTGGGGTCCTCGGCCAACGTTCAGCTCGCTGTTGCTCCCCTCCTGCTGtggttgctgctgctgcagctgcaggtTATTGTTCTGGTTATGAAAGCGGCCCTCACACCTGTTGATCTTCTTCAGCTGCTTCCTGGCCTCCTGAAACACCCTGGCGTAGACAAACACCATGATGAGCAGGGGGATATGGGCAAGAAGGAGATCAGACCAGCCACCACCCACACAGCCATCACCACAATTCGGGCTTTGCACTTGGTGAGTAGGGACTGGTACCTGAAGGGTGAGTATGCCCCGAACGGGACAACGATCAGCCCCATCACCAGGTCCGCACACGCCAGGGACGTGATGAAGCAATTGGTGACAGTCTGCAGCCGCTGGAACTTGGCGATGGCCGTGATCACGAGCACGTTGCCGAACACGATGCCCAGCACCAGCAAGGACATCAGGATCCCCGTTAACACCGACTGCACATCACCTGGCTCATGGCTGCTGGAGTTGGAGGCGCTGGAGTTATTGATCATTTCATtctcaaAATCCATGACACCGAATCAGATTGGCTACAAAAGATCAGGGATCCACCTGAGCATGACCCCTGGTTTATCTACTCTACATATCCACTCAAGGGTCTTCACTAGGAACACAGATGCAGGTGGAAGGGAAGCAAAGATTGCAGGTCCCTCCTTTCACAGTAGATCTGAAACCACCCAGATCCATGAGCTCACTGTATCCAAAAAGtttttaaagccCACCCCACTTGTCTGGAGccCAGATTATGGGTTTCGAATTGTGCACTttgattttgaaagcatttgtgACACTTCACCACACAATCTGGGAGCTACTGAAGTGGCCCCAAAGtCGATTCCCCGTTTCCTTGTCCCAGACCTGACTGCCGGCGGCTCATTCCTGACTGACAGCATGTTATGGCTCCagatctctgtctgtgtttatcACGAGCCCCTTGCAGAGCTGCCTGCAGTCGCCCTGCTACAACAGAGCATAAACAAACAGCACTGGCAAACGCAAGAGCAGACAAAGGGGAGCTGTGAAAGAGTGTGTCACGGCTTCTACACACCCTCCGTGGAGAGGGGGGGGCCTGCCCAGTGCCAGCACTCCTGGAAGTCATACAGCCAGGCAGGAGGACTTTTTAAACAGAAGACTAAAATAGAAGTTAGACAGAACTGA

Function

GO:

id name namespace
GO:0007165 signal transduction biological_process
GO:0004871 obsolete signal transducer activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00011184 True 1248 mRNA 0.53 10 13190779 13215914

Neighbor

gene id symbol gene type direction distance location
AMCG00011181 NA coding upstream 21630 13156251 ~ 13169149 (+)
AMCG00011177 NA coding upstream 186352 12999534 ~ 13004427 (+)
AMCG00011172 NA coding upstream 228994 12960213 ~ 12961785 (+)
AMCG00011171 NA coding upstream 262817 12918054 ~ 12927962 (+)
AMCG00011176 NA coding upstream 275708 12901039 ~ 12915071 (+)
AMCG00011187 ubtd2,LOC107672801,LOC107718046,LOC108279301 coding downstream 69383 13285297 ~ 13314709 (+)
AMCG00011186 NA coding downstream 112468 13328382 ~ 13330598 (+)
AMCG00011185 LOC107723822,LOC107664350 coding downstream 132650 13348564 ~ 13367027 (+)
AMCG00011189 ebf1 coding downstream 160677 13376591 ~ 13379795 (+)
AMCG00011192 NA coding downstream 272032 13487946 ~ 13492456 (+)
G104835 NA non-coding upstream 171715 13018792 ~ 13019064 (+)
G104814 NA non-coding upstream 250609 12935436 ~ 12940170 (+)
G104800 NA non-coding upstream 359499 12830849 ~ 12831280 (+)
G104709 NA non-coding upstream 638915 12551040 ~ 12551864 (+)
G104666 NA non-coding upstream 756223 12429496 ~ 12434556 (+)
G104910 NA non-coding downstream 337487 13553401 ~ 13555056 (+)
G104923 NA non-coding downstream 450033 13665947 ~ 13679380 (+)
G104979 NA non-coding downstream 641917 13857831 ~ 13858192 (+)
G104980 NA non-coding downstream 642737 13858651 ~ 13858982 (+)
G105046 NA non-coding downstream 846786 14062700 ~ 14063157 (+)
G104815 slc23a1,pwwp2a,LOC106603911,LOC102781148 other upstream 247697 12942380 ~ 12943082 (+)
AMCG00011163 reep2,LOC107557670,LOC107588406 other upstream 511350 12670376 ~ 12679429 (+)
G104719 NA other upstream 571724 12610129 ~ 12619055 (+)
G104694 NA other upstream 663748 12525360 ~ 12527031 (+)
AMCG00011141 LOC567622,LOC108413244,LOC103367052,LOC101466533,LOC107379323 other upstream 1050314 12067451 ~ 12140465 (+)
AMCG00011204 NA other downstream 652423 13868337 ~ 13878282 (+)
AMCG00011210 bod1,LOC107581912,LOC107661728,LOC107713186,LOC107662284,LOC107587245,LOC108278584,LOC106603873 other downstream 769751 13985665 ~ 13992845 (+)
AMCG00011209 cpeb4,LOC106603870 other downstream 797207 14013121 ~ 14061027 (+)
G105139 LOC100846954 other downstream 1403776 14619690 ~ 14620534 (+)
AMCG00011241 LOC102221627,LOC107740141,LOC107680337,LOC107593202 other downstream 2104866 15320780 ~ 15322658 (+)

Expression


Co-expression Network