AMCG00011229


Basic Information

Item Value
gene id AMCG00011229
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 14688179 ~ 14701429 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00011229
ATGGCTCTCTCAGTCGACTGGCTCAGGCATCGCTTTGGGAAATATTGCTCATCTAATGCAGCTGGTACCCACTCAGAGACGACACCACTGCTGAGGTCAAACCCCCTGCAAATAAACACTGCATGTCTGAAGAAGCACCGTGTCGTCTTCCCCAATAATGGACTCCTTCCCAAAGCCCAGAAGAAGTTTATGGACAAATATCCTGGAAACAAAATCCATACTACGAAGTATAACATCCTCAGCTTCTTgccaaaaaatctatttgagCAGTTTTGCAGGCTTGCAAACCTTTATTTCCTGTTCCTTGCCGGTCTGAATTGGTTCCCGCAAATGGAGGTATTCCACAGAGAGATAACTATGCTGCCCCTTGCAATAGTGCTGGCTGTGATTGGATTTAAAGATGCTGTAGAAGACTATAGGCGATACAAGTCAGACAAGAGAATAAACCATGGAAGAACAACTGTTTTTGACGGATGGGCAGGGAGCAGGCAAAAAGAGGGGGATGAAAAAGTCAGAACTTTGTACTCCAACTTACCTTTTGAGGGCTTGAAGAATAGTGCCCAACCTAATCGTCAATACGCTGGCAACGCTATCAAGACCACCAAATATACCCTGCTCTCTTTTATTCCCAAGAACCTTTTCGAGCAGTTCCATCGCGTTGCCAACTTCTATTTCCTTGGAATCGTTCTCTTGAATTTCGTGCCAATCGTGAATGCGTTTCAGCCTGAAATCGCACTCATTCCCATATGTATCATCTTGGCCGTTACTGCCATCAAAGATGCCTGGGAGGACTTTAGGAGGTACCAAGCTGACAGAAAATTGAACAATATGGGATGTTGCATCTTCAGCAGGAAACAAATGAAGTATGTTGAAAAATGCTGGAAAGACGTGCGTGTTGGAGATTTTGTGAAAGTGGTTTGTAATGAAATCATCCCTGCTGACATTCTGCTGTTGCACACCTCAGACCAGAGTGGCACCTGCCACATTGAGACCGCCAGTCTTGATGGAGAAACCAACTTAAAGCAGAGACAGGTTGTGAGAGGATTCTTGAAGCCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00011229 True 1056 mRNA 0.45 4 14688179 14701429

Neighbor

gene id symbol gene type direction distance location
AMCG00011231 NA coding downstream 11755 14649378 ~ 14676424 (-)
AMCG00011230 NA coding downstream 112151 14546071 ~ 14576028 (-)
AMCG00011223 stk32a,LOC104947536,LOC106965095 coding downstream 198598 14482370 ~ 14489581 (-)
AMCG00011222 stk32a,LOC107692947,LOC108414397,LOC107713578 coding downstream 221102 14465157 ~ 14467077 (-)
AMCG00011216 LOC107713182,LOC107587250,LOC107684217,LOC107581908,LOC107661723,LOC108429399,LOC107727287 coding downstream 347439 14211625 ~ 14340740 (-)
AMCG00011232 LOC103038806,LOC108413784,LOC107661674,LOC105011225,LOC106567507 coding upstream 122095 14823524 ~ 14833642 (-)
AMCG00011233 gabrb2l,LOC106567507,LOC105011225,LOC107661674,LOC107578857 coding upstream 183005 14884434 ~ 14890305 (-)
AMCG00011239 NA coding upstream 378955 15080384 ~ 15130043 (-)
AMCG00011238 NA coding upstream 534196 15235625 ~ 15238725 (-)
AMCG00011237 sept8,LOC103475354 coding upstream 545763 15247192 ~ 15272628 (-)
G105112 NA non-coding downstream 238398 14447338 ~ 14449781 (-)
G105107 NA non-coding downstream 253512 14427419 ~ 14434667 (-)
G105105 NA non-coding downstream 268126 14419701 ~ 14420053 (-)
G105080 NA non-coding downstream 426269 14218955 ~ 14261910 (-)
G105077 LOC106567452,LOC106603868,LOC105011253 non-coding downstream 484643 14198827 ~ 14203536 (-)
G105176 NA non-coding upstream 187797 14889226 ~ 14889437 (-)
G105187 NA non-coding upstream 227372 14928801 ~ 14929049 (-)
G105213 NA non-coding upstream 352987 15054416 ~ 15054817 (-)
G105221 NA non-coding upstream 417778 15119207 ~ 15119433 (-)
G105249 NA non-coding upstream 532274 15233703 ~ 15300851 (-)
G105050 NA other downstream 619618 14067215 ~ 14068561 (-)
AMCG00011211 NA other downstream 691590 13993983 ~ 13996589 (-)
G104929 NA other downstream 1008917 13665795 ~ 13679262 (-)
G104909 NA other downstream 1321105 13365083 ~ 13367074 (-)
AMCG00011174 slc23a1,pwwp2a,LOC106603911,LOC102781148 other downstream 1731912 12942390 ~ 12956267 (-)
G105290 LOC108429417 other upstream 668973 15370402 ~ 15373179 (-)
AMCG00011251 gfpt2,LOC106611946,LOC105024910,LOC108240504,LOC107375897 other upstream 798105 15499534 ~ 15515675 (-)
AMCG00011259 pcbd2,LOC107386701,LOC105890513,LOC106941140,LOC103129816 other upstream 1261909 15963338 ~ 15973872 (-)
AMCG00011271 LOC107562913 other upstream 1341942 16043371 ~ 16098179 (-)
AMCG00011290 rbm27,LOC106567487 other upstream 2242503 16943932 ~ 16961069 (-)

Expression


Co-expression Network